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Genes
knowledge of genes in rape
Species
1689 rapeseed accessions information
Gene expression
~100 thousand genes expression level
Transposable elements
Rape repeat database
Population variation
~50 million varitations
NLR genes
~three thousand NLRs
Gbrowse
Gbrowse synteny
genome synteny and gene index
ZS11
genome browser for ZS11
Gangan
genome browser for Gangan
Westar
genome browser for Westar
Shengli
genome browser for Shengli
Tapidor
genome browser for Tapidor
Zheyou7
genome browser for Zheyou7
No2127
genome browser for No2127
Quinta
genome browser for Quinta
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Gene index
find colinear orthologous genes
Blast
find similiar genes or sequence
KEGG/GO enrichment
enrichment
Homologous regions
interactive Homologous region viewer
Orthologous
Paralogs and Orthologous in Brassica
Phylogenetic Tree
phylogenetic analysis of 1688 accessions
Seq_fetch
fetch sequence by location and name
Literature
10 thousand related paper
Genome Facts
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1688 Rapeseed Accessions Information Table
Categorized by ecotype information:
ALL
Winter
Spring
Semi-winter
Unkown
Categorized by SNP Analysis:
ALL
WOR
SOR
SWOR
Region:
ALL
Africa
America
Arab States
Asia
Asia_Pacific
Europe
Eastern Europe
Oceania
West Europe
NA
Only high quality accessions:
Yes:
No:
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Code
Name
Ecotype-based subspecies
SNP-based subspecies
Country
Region
Sequencing depth