Names & Information
Knowledge of BnaA01G0001800NO:
| Gene Name | BnaA01G0001800NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable WRKY transcription factor 52 [Brassica rapa] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1 |
| NT seq | Len:4383 nt ATGGATTCCCTCCTTGGGAGCTGTGCTGCTGCTGCGATAGGATTCTTCACGATTCTCGTTACGCTATTACTTGCGTTTTA CAGAAGATTCAGATCCAATCGACGGAACGTGACAGTGGCGTCATCTTCTTCGACGAGCACCACTCTATCTAGCGATTTCG AAGCAGTGCCTAATGGATTACGAATACGCGCCGTCTACATCTACTGCGAAGAGACGTTACAGTACACCTTCGCTAGCCAC CTCTCCGTCGATTTCCGCCGGAAACGCATTGCTGCGTTTGTGAATTGCGATTTGAATCCGGATGTGGCAGAGGGAGCGAG CGCTTCTGTGGTGGTTTTCTCCAAGAGCTACTCGTCCTCCGCCTCATGCCTTGACAAGCTCGTGACGGTTCTTCGGTGCC GGAGGAATACCGGCCAGATGGTGGTGGTTCCGGTGTTCTACGGCATTAGTCCATCAGATGTTGCCGTGCGGGTGCACGGC TCAGCTGATCGGATAAGAGAGTGGAGCAACGCTCTCAGAGAACTGAGAGAGTTGCCAAGCCACCAGTGTAGTGAGGAATC TGATGAGGGCCAAGTGGTGGAAGAGATTGTCAAAGATGTGTATGAAAAGCTCTTTCCTACTGAACAGGTTGGAATCAACT CAAGGCTGGTGGAGATAGAACAGTTGCTTTGCAAGCAACCATGGGGTATACGCCGCATCGGGATTTGGGGTATGCCTGGC ATAGGCAAGACGACGCTTGCTAAAGCAGTTTTCGACGACATCTCTGGAGGCTATGAGGCTTCTTGTTTCATCAAACACTT TGACGAAGCTTTCAGTGAGAAGGGACTTCACCGTTTGTTGGAGGAACATTTTGGGAAAATCCTCAAGGAACTGCCTCGTG TATGCAGTAGCATTACAAGACCTAGTCTCCGAGGGGAGATTTTAAGCAAGAAGAGGACTCTTGTTGTTCTTGATGATGTG AAAAATCCCTTAGCTGCCGAGTCTTTCCTCGGAGGGTTTCATTGGTTTGGTCCGGGTAGTTTAATCATCATAACCTCCAG AGATAAACAAGTGTACCGCCATCGTCAGATAAATCATGTGTATGAGGTTCGGAGCTTAAGCGAGGACGAGGCTTTGCAGC TGCTATCTCAGTGTGTATTTGGTAATGACATAAGAGATCAAAAACGCATGGAACTATCGATGGAAGTGATTGACTACGCT AGGGGAAATCCATTTGCTCTAAGCTTTTACGGCAGAGAGCTGAAGGGAAAGAAACCGTCAGAAATGGAGGCGACATTCCT CAAACTCAAGCTACGTACTCCATATAAGATTCATGATTTATTCAGCAGCAGCTACAAAACACTTGACGACAACGAGAAGA ACATTTTCTTGGACATTGCTTGTTTCTTCGTGGGAGAAGATGTTGACTATGTGATGCAACTGCTTGACGGATGTGGCTTC TTTCCACATGTTGGGATTGACGTTCTTGTGGAGAAGTGTCTGGTGACTATTTCAGAAAACAGAGTGATAATGCATAGAAT AATCCAAGACTTTGGCAGAGAAATAATCAACGGGGAATCAGTACAGATAGAGCGCCGTCGGAGACTGTGGGAGCCTTGGA CCATCAAGTTTCTACTTGAGGACGACAAACTTGAAGCAAATGGATATCCCAGAGAAACCTGCAAACGTCCTTTGGGCACT GAAGACATCGAGGGCATATTTCTAGCCACATCGAGTTTACTCTTTGATGTGAAGCCCACTGCTTTTGATAATATGCTTAA CCTTAGATTCCTCAAGATTTACTGTTCCAGTCATGAAAACCAATATGGTCTCGGCCTTCCAAGAGGACTTGAGTCTCTGC CATATGAGCTAAGACTTCTCCACTGGGAGAACTATCCTTCAGAGTCCTTGCCACAAGAATTTGACCCATGCCACCTAGTA GAACTCAATATGTCTTACAGTCATCTTCAGAAACTTTGGGAAGGAACCAAGAACCTCGACATGTTGAAGACGTGTAAGCT TTGTTATTCCCAGCAGCTGACTGAGGTTGACGATCTTTCTAAAGCTCAGAATATCGAGCTAATTGATCTCCATGGCTGTA CAAAACTGCAGAGATTTCCAGCCACCGGTCAACTACGGCATCTCCGAGTTGTAAATCTTTCAGGCTGCACAGAGATCAGA AGTGTCCCAGAGGTTTCACCTAACATTGTGGAGCTTCATCTCCAGGGAACTGGCACAAGAGAATTACCAATATCTCTTGT GGCCCTTTCCCAAGAAGATGACCTGAACCTTGAGAAATTAACAACCCTGGCTCAGGTCGTCTCATCAAATCAGCATCTTC AGAAACTTGTCTTGCTGAATATGAAAGATTGTGTTCATTTGCAAAGCTTGCCTCACATGTTTCATTTAGAAACTCTCGAA GTTCTTGATCTGTCTGGATGCTCGGAGCTCAAGAGTATACAAGGATTCCCACGAAACTTAAAAGAGCTATATCTTGTTGG CGCTGCTGTCACAAAACTACCACCCCTTCCCCGGAGTATAGAAGTCTTGAATGCACATGGTTGTATGTCTCTTGTATCAA TTCCTTTTGGTTTCGAGAGACTTCCTAGGTATTACACATTCAGCAATTGCTTTGCTCTTTATGCACAAGAGGTCAGAGAA TTTGTAGCTAACGGTCTGGCTAATATAGAACGCATCGCGAGAGAGCATCAGCGGGAACTCAAGAAATCTCTGGCTTTCAG CTTCACTGTGCCTTCGGCTGTAAGTAAAAATTTCACTTGTGATCTGCAACCAGGGTCTTCTGTGATGATACAACTTGGTT CTTCTTGGAGAACCACACTCGGTTTTGCTGTCTTAGTCGAACTTTCATTTTTGGAGGATTACCAGGAGGCCACTGGTTTT GGAATCACTTGTGTTTGCAGATGGAAAGACAATGAATTCGTCTCTCATAGGCTGGAAAAAAGCTTTCACTGTTGGAATCC AGAGGACGGTGTTCCGAAAGATCACATGTTTGTCTTCTGTGATTTAAACATGCATCGGAGCACCTGCGAAGGAAATGATC CCGGTATATTGGCTGATCTTGTCGTATTTGAATTCTTTACTGTGAACAAACAGAAGAAGCCTCTGGATGAGAGTTGCACA GTGAAGAAATGTGGAGTCCATGTGATTACTGCTGCAAATGGAGATGCAAGTTGTAACATGACTCAAGAGAGTTTTGGTAA CGAGGTTGAAGAAGAGTTGAGGGTGGTCTTTGATGTCTTGGACAAGAATGATAGAACTTTGTTTCTTTACATTGCACGTC TGTTCAACGACGAGAAAGCTGATTTCTTAACACCGCTTATCCCTAGCACTGGCTTGGAGATTAGTTCTAGGCTCAAGTTC TTAGCCAGTAACTCTCTCATACATATATCTCCATTTGGTATCACAATGCGGCATAGCTTACGTCAGAAAATAAGTAGGGA GATCGTCCATAGACAACCCACGTTGGGGAAGGACTTAATAAAGGACTCCACGTCACCTGCTTGGAAATACGACGTCTTTA TAAGTTTCAGCGGGGAAGATGACAGTAATAACAAACTCAGCAACCTTCTTGCAAAGTTCAAAGGTAAACTAATGAGTACA CCCCATAGATGCAAGTCGGTCACACCAGAGCTTGTGCAAGCAATAAGAGCATCGAAAGGTTCGATTGTCTTGCTCTCAAA GAGCTACGCCTCTTCGAGTAGGTGCTTGGATGAGCTGGTAGAGATTATGAATTGCAATAAAGAGCTGGCTCAAAAAGTAG TGGCCATATTCTACAACGTGGCTCCTTCCGATGTTAGGCTTCAGAGTGGAGACTTTGGGAGGGCCTTTCAAACTACGTGC ATAGGCAAATCAGAGGATGAGAAACGGAAATGGGCGCAGGCTTTGGCCGACTTAGCGAATATGGACGGAGTGAATTCACG CAAATGGGCTAATGAAGCAAACATGTTCGAAAAAACTGACTCTGACGTTCTGGAGAAGATAGATCATAAAAGATCAAATG AGTCTGGCGATATGGTTGGAGTTGAAGAACATGTTACAGACGTCGGTTTTTGGTCGGGTTGGGAATCTGAGGAAGTGGAT AAAACAGTTGGGACAGCGGGTTTCATGACAAAAGGGGAAGAGATAAACGCAAGTATGGTTGCTATGCCAGTGGAGCCGTC ACATCTGTTTAAACAAGAAGGGAGAGTGATAAGATCCGGAGCGTGGAGTCCTAGTTTCCTCGATCGTATCCCCTTTGCCG AGCTTTATACTGGAGAAGTCCCAAGTCCTAGCTTCCTCGATCGTATCCCCTTTGCCGAGCTTTATACTGGAGAAGTCCCA ACTGCCGTTTTACAAGGGCTGGGCAATATCCGCTCAGTGCTCCAATCTAGAAGATCTATATAA |
| AA seq | Len:1461 aa MDSLLGSCAAAAIGFFTILVTLLLAFYRRFRSNRRNVTVASSSSTSTTLSSDFEAVPNGLRIRAVYIYCEETLQYTFASH LSVDFRRKRIAAFVNCDLNPDVAEGASASVVVFSKSYSSSASCLDKLVTVLRCRRNTGQMVVVPVFYGISPSDVAVRVHG SADRIREWSNALRELRELPSHQCSEESDEGQVVEEIVKDVYEKLFPTEQVGINSRLVEIEQLLCKQPWGIRRIGIWGMPG IGKTTLAKAVFDDISGGYEASCFIKHFDEAFSEKGLHRLLEEHFGKILKELPRVCSSITRPSLRGEILSKKRTLVVLDDV KNPLAAESFLGGFHWFGPGSLIIITSRDKQVYRHRQINHVYEVRSLSEDEALQLLSQCVFGNDIRDQKRMELSMEVIDYA RGNPFALSFYGRELKGKKPSEMEATFLKLKLRTPYKIHDLFSSSYKTLDDNEKNIFLDIACFFVGEDVDYVMQLLDGCGF FPHVGIDVLVEKCLVTISENRVIMHRIIQDFGREIINGESVQIERRRRLWEPWTIKFLLEDDKLEANGYPRETCKRPLGT EDIEGIFLATSSLLFDVKPTAFDNMLNLRFLKIYCSSHENQYGLGLPRGLESLPYELRLLHWENYPSESLPQEFDPCHLV ELNMSYSHLQKLWEGTKNLDMLKTCKLCYSQQLTEVDDLSKAQNIELIDLHGCTKLQRFPATGQLRHLRVVNLSGCTEIR SVPEVSPNIVELHLQGTGTRELPISLVALSQEDDLNLEKLTTLAQVVSSNQHLQKLVLLNMKDCVHLQSLPHMFHLETLE VLDLSGCSELKSIQGFPRNLKELYLVGAAVTKLPPLPRSIEVLNAHGCMSLVSIPFGFERLPRYYTFSNCFALYAQEVRE FVANGLANIERIAREHQRELKKSLAFSFTVPSAVSKNFTCDLQPGSSVMIQLGSSWRTTLGFAVLVELSFLEDYQEATGF GITCVCRWKDNEFVSHRLEKSFHCWNPEDGVPKDHMFVFCDLNMHRSTCEGNDPGILADLVVFEFFTVNKQKKPLDESCT VKKCGVHVITAANGDASCNMTQESFGNEVEEELRVVFDVLDKNDRTLFLYIARLFNDEKADFLTPLIPSTGLEISSRLKF LASNSLIHISPFGITMRHSLRQKISREIVHRQPTLGKDLIKDSTSPAWKYDVFISFSGEDDSNNKLSNLLAKFKGKLMST PHRCKSVTPELVQAIRASKGSIVLLSKSYASSSRCLDELVEIMNCNKELAQKVVAIFYNVAPSDVRLQSGDFGRAFQTTC IGKSEDEKRKWAQALADLANMDGVNSRKWANEANMFEKTDSDVLEKIDHKRSNESGDMVGVEEHVTDVGFWSGWESEEVD KTVGTAGFMTKGEEINASMVAMPVEPSHLFKQEGRVIRSGAWSPSFLDRIPFAELYTGEVPSPSFLDRIPFAELYTGEVP TAVLQGLGNIRSVLQSRRSI* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16225 probable WRKY transcription factor 52 (A) |