Names & Information
Knowledge of BnaA01G0023300GG:
| Gene Name | BnaA01G0023300GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA01g01450D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
| NT seq | Len:3468 nt ATGGTGGTGTCTTCCTCCTTCGTACAATCATCACCCCCGCAGCATCAAGTCTTCATCAATTTCCGAGGGAAGCAGCTGCG GAACGGTTTCGTAAGCCACCTGGAGAAGGCCCTGAGAAAAGATGGAATCAATGTTTTTATCGACAAAAACGAAACCAAAG GTAAAGATCTCAGCATTCTCTTTTCGAGGATCGAAGAGTCCAGGATCGCGCTGGCCATCTTCTCAACGCTCTATACGGAG TCGAACTGGTGCTTGAACGAGCTGGAGAAGATCAAGGAGTGCGTTGACTTGGGGAAGCTTGTGGTCATCCCCATCTTCTA CAAGGTGGAGACTGACGATGTGAAGAATCTCAAGGGAGTGTTTGGTGACAAGTTTTGGGAGTTGGCTAAGACTTGTAGAG GTGAAAAGCTTGATAAGTGGAAAGAAGCTTTAGAGGATGTCCCCAAAAAGTTAGGATTCACTTTAAGTGAAATGAGTGAT GAAGGTGAATACATTAGTAAAATTGTAGGTCAAGTGATGAAAGTGCTCTCTGATGTTTCGGCTGGTCTTGAAAGAGATGT CCCCATTGAAGATCCTTCTGAAGCTGATCCTGACTCATCTCCTCTTTATGGAATCGAAACACGACTTAAGCAGCTGGAAG AGAAGTTAGAGTTCGATTGCGAGAGTACACTCACGGTTGGTGTTGTTGGGATGCCGGGGATTGGTAAGACAACTTTGACG AAGATGCTGTACGAAAAGTGGCAACACAAGTTCCTGCGCTGTGTTTTCCTTCACGATGTCCGTAAACTGTGGCAAGACCG CATGATGGATCGGAACATTTTCATGAGAGAGTTGTTGAAGGATGATGACTTGAGCCAACAAGTCGCTGCTGACCTGTCGC CTGAATCCTTGAAGGCACTTTTACTCAGTAAGAAATCTCTTGTTGTTCTCGATAACGTAACCGACAAGAAACAGATTGAA GTTCTTCTTGGCGAATGCGATTGGATTAAAAAAGGTAGCTTGATTTTTATCACGACCAGCGACAAGTCGGTGATCGAAGG GAAGGTTGATGATACATATGAGGTTCTGAGGTTGAGTGGGAGAGAAAGCTTTCAGTACTTCAGCTATTTCGCTTTTGGTG GTGGTAAGCACTACTATACTCCCAAGGGAAATTTCATGAACCTTTCTAGATTGTTTGCGGATTACGCCAAGGGCAACCCG TTAGCTCTCAAGATATTAGGTGTTGAGCTTAACGGAAAAGACGAGACTCACTGGGAAGATAAACTCTCCAAGCTGGCACA AAGTCCGGACAAGACTATACAAAATGTGTTGCAGATAAGCTATGATGGACTTAGTGAGCTTCATAAAAATGTCTTTCTAG ATGTAGCCTGTTTCTTTAGATCTGGGGATGAGTATTACGTGAAGTGTTTAGTGGAGTCTTGTGACAGTGAAATAAAGGAT CTTGCCAGCAAATTTTTTATTAACATTTCTGGCGGACGAGTTGAGATGCATGATTTACTGTATACATTCGGCAAGGAACT TGGTTTACAAGGTTCGCGGAGGCTGTGGAACCATAAAGGCGTTGTTGGTGCGCTGAAGAAAAGAGCAGGAGCAGAGAGTG TGAGAGGTATTTTTCTCGACATGTCTGAACTGAAGAAGAAACTTCCTTTGGAAAAATGCACCTTCAGTGGGATGCGTAAT CTTAGGTACCTTAAATTCTATAATTCTTGTTGCCATCGTGAATGTGAAGCTGGCTGCAAACTAAGCTTCCCTGAGGGACT TGAGTTTCCCTTGGATGAAGTACGGTATCTCTACTGGCTGAAATTCCCTTTGAAGAAACTTCCAAAAGACTTCAACCCCA AGAATCTTACGGATCTTAGCCTGCCTTACAGCGAGATTGAAGAGATATGGGAGGGTGTTAAGGCTACACCGAAGTTAAAG TGGGTTGATCTAAGCCACTCAAGCAAGTTAAGCAAGTTGTCTGGGTTGCAAAATGCGGAAAGTCTCCAAAGAGTGAGTCT CGAAGGCTGCAAGAGTTTACAGGAGTTGCCCCGGGAGATGAACCATATGAAATCTCTTGTTTTCCTCAACATGAGGGGAT GCACAAGTCTCCGGTTTCTTCCGCATATGAATCTCATCTCCATGAAAACTCTCATCCTCACCAACTGCTCAAGTCTCCAG GAGTTCCGGGTTATTTCGGATAATCTCGAAACTCTGAAGTTAGATGGAACTGCCATAAGTCAACTTCCTGCAAACATGGT GAAGCTCCAGAGACTGATGGTACTGAACTTGAAAGACTGCATAATGTTGGAGGCTGTTCCAGAATCCCTGGGGAAGCTGA AAAAGCTGCAAGAACTGGTGCTATCTGGTTGTTCGAAGCTCAAGACTTTTCCAATTCCCATTGAAAACATGAAACGCTTG CAGATTTTGTTGCTGGATACGACAGCAATTACAGACATGCCGAAGATATTGCAGTTCAATAGCCAAATAAAATGTGGTAT GAACGGTCTATCCTCATTGCGTCATCTATGCTTAAGCAGGAACAATATGATCACCAACCTGCAAGTAAACATCAGTCAAC TACATCATCTGAGATTGCTCGACGTGAAGTACTGCAAGAATCTCACATCTATTCCATTGCTTCCACCAAATTTAGAGGTC TTAGATGCACATGGCTGCGAGAAACTGAAAACAGTAGCAACCCCCTTGGCGCTTCTTAAGCTTATGGAGCAGGTTCACTC TAAATTCATTTTCACCAACTGCAACAACCTTGAACAAGTTGCAAAGAACAGCATCACAGTGTATGCTCAAAGGAAAAGCC AGCAAGATGCAGTTAGATGCTACAAAGAGGGCAATGTTTCAGAAGCTTTGCTTATCACTTCCTTTCCAGGGAGCGAAGTC CCATCATGGTTCAACCATCGTACAATTGGATCTTCCTTGAAGCTCAAGTTTCCGCCACATTGGTGCGACAACAGGCTTTC AACAATAGTTCTATGCGCTGTTGTCTCATTCCCTTGCACACAAGATGAAATCAACCGTTTTTCAATAGAGTGCACTTGCG AATTCACAAACGAACTTGGGACATGTGTACGTTTCAGCTGCACTCTTGGTGGAGGTTGGATCGAACCGCGCGAGATTGAT TCGGACCATGTGTTTATCGGTTACACCAGCTGCTCACACCTAAGAAATCATGTGGAAGGGTCGGGAGAACATCATAAATG TGTTCCTACAGAGGCTTCAATCGAGTTCGAAGTGAGAGATGGAGCAGGGGAGATTGTGAATTGTGGTTTAAGTTTGGTAT ACGAGGAACCAAACCATGCCGTTACTGAAGGAGACTATAATGGAACTTCTTCAAGAAGAGATTTCTCAGTTGGAGAGAGT ATAGTGAGTTTTGCTGTTCGGTTTGTCTCCACTGTTTTGAAATATCTATGGCTACTTGTTGCATTCTTTTTGGTTTATGG GTTTGCTAAATTTTTCTTTTTTTACTAA |
| AA seq | Len:1156 aa MVVSSSFVQSSPPQHQVFINFRGKQLRNGFVSHLEKALRKDGINVFIDKNETKGKDLSILFSRIEESRIALAIFSTLYTE SNWCLNELEKIKECVDLGKLVVIPIFYKVETDDVKNLKGVFGDKFWELAKTCRGEKLDKWKEALEDVPKKLGFTLSEMSD EGEYISKIVGQVMKVLSDVSAGLERDVPIEDPSEADPDSSPLYGIETRLKQLEEKLEFDCESTLTVGVVGMPGIGKTTLT KMLYEKWQHKFLRCVFLHDVRKLWQDRMMDRNIFMRELLKDDDLSQQVAADLSPESLKALLLSKKSLVVLDNVTDKKQIE VLLGECDWIKKGSLIFITTSDKSVIEGKVDDTYEVLRLSGRESFQYFSYFAFGGGKHYYTPKGNFMNLSRLFADYAKGNP LALKILGVELNGKDETHWEDKLSKLAQSPDKTIQNVLQISYDGLSELHKNVFLDVACFFRSGDEYYVKCLVESCDSEIKD LASKFFINISGGRVEMHDLLYTFGKELGLQGSRRLWNHKGVVGALKKRAGAESVRGIFLDMSELKKKLPLEKCTFSGMRN LRYLKFYNSCCHRECEAGCKLSFPEGLEFPLDEVRYLYWLKFPLKKLPKDFNPKNLTDLSLPYSEIEEIWEGVKATPKLK WVDLSHSSKLSKLSGLQNAESLQRVSLEGCKSLQELPREMNHMKSLVFLNMRGCTSLRFLPHMNLISMKTLILTNCSSLQ EFRVISDNLETLKLDGTAISQLPANMVKLQRLMVLNLKDCIMLEAVPESLGKLKKLQELVLSGCSKLKTFPIPIENMKRL QILLLDTTAITDMPKILQFNSQIKCGMNGLSSLRHLCLSRNNMITNLQVNISQLHHLRLLDVKYCKNLTSIPLLPPNLEV LDAHGCEKLKTVATPLALLKLMEQVHSKFIFTNCNNLEQVAKNSITVYAQRKSQQDAVRCYKEGNVSEALLITSFPGSEV PSWFNHRTIGSSLKLKFPPHWCDNRLSTIVLCAVVSFPCTQDEINRFSIECTCEFTNELGTCVRFSCTLGGGWIEPREID SDHVFIGYTSCSHLRNHVEGSGEHHKCVPTEASIEFEVRDGAGEIVNCGLSLVYEEPNHAVTEGDYNGTSSRRDFSVGES IVSFAVRFVSTVLKYLWLLVAFFLVYGFAKFFFFY* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |