Names & Information
Knowledge of BnaA01G0024400ZS:
| Gene Name | BnaA01G0024400ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
| NT seq | Len:1827 nt ATGGTGGTGTCTTCCTCCTTCGTACAATCATCACCCCCGCAGCATCAAGTCTTCATCAATTTCCGAGGGAAGCAGCTGCG GAACGGTTTCGTAAGCCACCTGGAGAAGGCCCTGAGAAAAGATGGAATCAATGTTTTTATCGACAAAAACGAAACCAAAG GTAAAGATCTCAGCATTCTCTTTTCGAGGATCGAAGAGTCCAGGATCGCGCTGGCCATCTTCTCAACGCTCTATACGGAG TCGAACTGGTGCTTGAACGAGCTGGAGAAGATCAAGGAGTGCGTTGACTTGGGGAAGCTTGTGGTCATCCCCATCTTCTA CAAGGTGGAGACTGACGATGTGAAGAATCTCAAGGGAGTGTTTGGTGACAAGTTTTGGGAGTTGGCTAAGACTTGTAGAG GTGAAAAGCTTGATAAGTGGAAAGAAGCTTTAGAGGATGTCCCCAAAAAGTTAGGATTCACTTTAAGTGAAATGAGTGAT GAAGGTGAATACATTAGTAAAATTGTAGGTCAAGTGATGAAAGTGCTCTCTGATGTTTCGGCTGGTCTTGAAAGAGATGT CCCCATTGAAGATCCTTCTGAAGCTGATCCTGACTCATCTCCTCTTTATGGAATCGAAACACGACTTAAGCAGCTGGAAG AGAAGTTAGAGTTCGATTGCGAGAGTACACTCACGGTTGGTGTTGTTGGGATGCCGGGGATTGGTAAGACAACTTTGACG AAGATGCTGTACGAAAAGTGGCAACACAAGTTCCTGCGCTGTGTTTTCCTTCACGATGTCCGTAAACTGTGGCAAGACCG CATGATGGATCGGAACATTTTCATGAGAGAGTTGTTGAAGGATGATGACTTGAGCCAACAAGTCGCTGCTGACCTGAACA ATATGATCACCAACCTGCAAGTAAACATCAGTCAACTACATCATCTGAGATTGCTCGACGTGAAGTACTGCAAGAATCTC ACATCTATTCCATTGCTTCCACCAAATTTAGAGGTCTTAGATGCACATGGCTGCGAGAAACTGAAAACAGTAGCAACCCC CTTGGCGCTTCTTAAGCTTATGGAGCAGGTTCACTCTAAATTCATTTTCACCAACTGCAACAACCTTGAACAAGTTGCAA AGAACAGCATCACAGTGTATGCTCAAAGGAAAAGCCAGCAAGATGCAGTTAGATGCTACAAAGAGGGCAATGTTTCAGAA GCTTTGCTTATCACTTCCTTTCCAGGGAGCGAAGTCCCATCATGGTTCAACCATCGTACAATTGGATCTTCCTTGAAGCT CAAGTTTCCGCCACATTGGTGCGACAACAGGCTTTCAACAATAGTTCTATGCGCTGTTGTCTCATTCCCTTGCACACAAG ATGAAATCAACCGTTTTTCAATAGAGTGCACTTGCGAATTCACAAACGAACTTGGGACATGTGTACGTTTCAGCTGCACT CTTGGTGGAGGTTGGATCGAACCGCGCGAGATTGATTCGGACCATGTGTTTATCGGTTACACCAGCTGCTCACACCTAAG AAATCATGTGGAAGGGTCGGGAGAACATCATAAATGTGTTCCTACAGAGGCTTCAATCGAGTTCGAAGTGAGAGATGGAG CAGGGGAGATTGTGAATTGTGGTTTAAGTTTGGTATACGAGGAACCAAACCATGCCGTTACTGAAGGAGACTATAATGGA ACTTCTTCAAGAAGAGATTTCTCAGTTGGAGAGAGTATAGTGAGTTTTGCTGTTCGGTTTGTCTCCACTGTTTTGAAATA TCTATGGCTACTTGTTGCATTCTTTTTGGTTTATGGGTTTGCTAAATTTTTCTTTTTTACTAAATAG |
| AA seq | Len:609 aa MVVSSSFVQSSPPQHQVFINFRGKQLRNGFVSHLEKALRKDGINVFIDKNETKGKDLSILFSRIEESRIALAIFSTLYTE SNWCLNELEKIKECVDLGKLVVIPIFYKVETDDVKNLKGVFGDKFWELAKTCRGEKLDKWKEALEDVPKKLGFTLSEMSD EGEYISKIVGQVMKVLSDVSAGLERDVPIEDPSEADPDSSPLYGIETRLKQLEEKLEFDCESTLTVGVVGMPGIGKTTLT KMLYEKWQHKFLRCVFLHDVRKLWQDRMMDRNIFMRELLKDDDLSQQVAADLNNMITNLQVNISQLHHLRLLDVKYCKNL TSIPLLPPNLEVLDAHGCEKLKTVATPLALLKLMEQVHSKFIFTNCNNLEQVAKNSITVYAQRKSQQDAVRCYKEGNVSE ALLITSFPGSEVPSWFNHRTIGSSLKLKFPPHWCDNRLSTIVLCAVVSFPCTQDEINRFSIECTCEFTNELGTCVRFSCT LGGGWIEPREIDSDHVFIGYTSCSHLRNHVEGSGEHHKCVPTEASIEFEVRDGAGEIVNCGLSLVYEEPNHAVTEGDYNG TSSRRDFSVGESIVSFAVRFVSTVLKYLWLLVAFFLVYGFAKFFFFTK* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | NB-ARC domain |
| KEGG | RPS4; protein RESISTANT TO P. SYRINGAE 4; K16226 disease resistance protein RPS4 (A) |