Names & Information
Knowledge of BnaA01G0127700GG:
| Gene Name | BnaA01G0127700GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103861120 [Brassica rapa] |
| Best Hit (SwissProt) | Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5 PE=2 SV=1 |
| NT seq | Len:1554 nt ATGACGAACTTCTCTCGGTCGTGGAAACATGATCAAGTGTTCATCAGTTTCAGAGGTAAACCTCTAAGAAAAAATTTTGT GAGCCATCTAAAAGAAGAATTAAAGAGGAGCAAAATCAACTTTTTCATTGACGAGGATGAGACGAGAGGGAGACGGATAG CAACACTCTTTGAAACAATCAGAGAGTCAGGTGTTGCACTCATACTCTTGTCAAACAAGTACTCCGACTCAGAGTGGTGC TTAGACGAGCTTGTAGAGATCAAGAAGCAAATGGAGACGGGGTATCTTGACGCTTTTCCTGTATTCTACGAAGTGAAATC TGCCTCCATCAAGAGCCAGACTGGTTGCTTCGGTAACACTCTCCTTAAAACTGAGAATAAAGTTCGCAGAAAAGTTGATC GTGGAAGCTACAAGTCCATACTTGAAACAGAGGCTAGGATTTGGGGATGGAGGCAAGCTTTAGTCTATATTGAGAAGTCT CTGATGCATCCCCAGGAGGCATTAACGTCCTTATTACAAGCTCTAAACATTAAGAAGTCAGATCTTGAAGATCTTATTAC AAGGCCGTTCATTCAGACCAGAGGCACTGATCATCTGGTTTTTCTTGACCTGATCTCTCTTAAAAATCCTATCCTCGGTC AGCGGCTAATCAAGCGTGTTCAGGATGGAATGATTTTCTTGGTGTTGCTAGGTTCTGTTGACGGCTCCGTTGAGGATGTT GATTTCAAGCCTCGCTTGTTGTCCAGGAAACCTCGACTATTTCCTGGTAACAAGCTTATTGTCTCCCCTCAAGAAATTCA AGAGCAACGCTACTTTTCACCAGTTCAAGTCAGCACGGAATATGCAGATGTGTTAGCAATGGCAGAGAGTAATGAAAATA CTCGGAATCGTCTTGGTGTAGATAAAAACTCCGATTGTTCTTTGACCTGCTTTTCATTGTTATGCAACATTATGAAACGT TTTGAAATGATGATAAACCCTCCTCCGCCTAGAGTGTTCATCAGTTTCGGCGAGAAGCAGCTCAAAATGAACCTAGTAGA ATGCTCTGATCCAGTGTTCTTCACTGATGTCGTGACCAAGGTCAAAGAACTGTTTGAATTTAAGGCTATACCGAAGAAGT CAAGTTCCTATATAATTACTAATCAAGTGATTGAAGAAAAGCCTATAATGCATCGACAGAAGACAGCACCAGCAATACCA ACAGTCAAATCCCTAGATGATGACTTATTCTACTCCCTACCTTCGTTCTTACAAGCTCTAGACCTTGAAATTACTGACCT TGAGGGCTTCACCGAGATGCACAATGGTCTCATATCTCTGAGCCTAAAAAGACACACTAATCTAGTATGTCTGAACTTGG GTTCTCTTGAAAAGCTGGTCCATTTTCGGTGTTCTGACTCATTCGAATTCCTTAGTCAGGGTTTTGGTCTGAATCATCCC GGTATCAGCAGATTTGAAGAGCCTTCCCGGGTCCTTGCAATAGAATCATCTCAACCCCAACAACGGTTTGATAACGTCTT ATCGTCTCATCTCAAAATCACCAATATCACATAA |
| AA seq | Len:518 aa MTNFSRSWKHDQVFISFRGKPLRKNFVSHLKEELKRSKINFFIDEDETRGRRIATLFETIRESGVALILLSNKYSDSEWC LDELVEIKKQMETGYLDAFPVFYEVKSASIKSQTGCFGNTLLKTENKVRRKVDRGSYKSILETEARIWGWRQALVYIEKS LMHPQEALTSLLQALNIKKSDLEDLITRPFIQTRGTDHLVFLDLISLKNPILGQRLIKRVQDGMIFLVLLGSVDGSVEDV DFKPRLLSRKPRLFPGNKLIVSPQEIQEQRYFSPVQVSTEYADVLAMAESNENTRNRLGVDKNSDCSLTCFSLLCNIMKR FEMMINPPPPRVFISFGEKQLKMNLVECSDPVFFTDVVTKVKELFEFKAIPKKSSSYIITNQVIEEKPIMHRQKTAPAIP TVKSLDDDLFYSLPSFLQALDLEITDLEGFTEMHNGLISLSLKRHTNLVCLNLGSLEKLVHFRCSDSFEFLSQGFGLNHP GISRFEEPSRVLAIESSQPQQRFDNVLSSHLKITNIT* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | TIR domain |
| KEGG | hypothetical protein; K04646 clathrin heavy chain (A) |