Names & Information

Knowledge of BnaA01G0165300ZS:

Gene Name
BnaA01G0165300ZS
Gene Location
Gene Structure
Protein Name
Alternative splicing
Homology
Best Hit (NR)
BnaA01g16260D [Brassica napus]
Best Hit (SwissProt)
Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1
NT seq
Len:2934 nt

ATGGAGTGTTTGTCCCCATTCTTGGGGGAGATTTTGCGTCCTATGTGTGACTCCATGTGCTCCCGGGTCGGTAATGCCAT
AAGGTTCAAATCCAACGTCCAAGCTCTTAACAGTGTGATGGAGAGATTAGTTGAGCTTAGGGGCAACATAAATGAAGACC
ACAAAGATAAATCCTTTAGTCTCAAGCTAATGGGGTGGCAAAGAAAGTCTGATGAGGTTATCACTGAAGCAAGGTCCGAA
CTTGACGAACGGGTTCCATGCGGTATGTCCTTGAAATCCAGGCTGAGCAGGAAACTCGTCACGATTCTCAACGAAGCTAG
AATGCTCGAAAAGGAAGGTTTAGATCTTTTAGACATGATAGCTGTGGCTACTGCACATGAAAGAGTTGAACATGTTCCAG
GAGTTTCAGTACTTCATCAAACAACGGCTTCAAATATGTTGGGTAAAATTATAGATGGTTTGAGGAGCAGTGAGGTTCAG
AAGATTGGTATTTGGGGTATGGGTGGAGTAGGGAAAACGACATTGGTGAGGACGTTGAACAATAAGCTTCATGAAGAGAC
TGCAACTCAACCATTTGGCTTGGTGATCTTTGCTACAGCATCCAAAGACTTTGATCCAAGAACGGTCCAAAAGCAGATTG
CTGAGAGACTGGATATCGACACCAGGTTGGAAGAAACTGTAGAGAGGCTGGCAAGAAGGATCTATGCGAGGCTTGAGAAA
CAGACCAACTTCCTTCTTATTCTTGATGACGTGTGGAAAGATATTGATTTAGATCTTCTGGGCATTCCAGAAGAGAAGAA
GGGTTCAAAAATCATTCTCACTTCCAGGTCTCTTGACGTCTGTCGTAGCATGAGGACAAATCTTGATATTAGGGTTGATT
GCTTGTGCGAAGAAGAAGCTTGGGAACTGTTTTGCCAGAATGCAGGAGAGGTTGCGAGATCAGAACGTATTGAGCGCTCA
GCAAAAGCCGTTTCACGTGAATGTGGCGGGTTGCCCTTGGCTATCATCACAGTGGGGACAGCTATGAGGGGAAAGACAGA
TGTCAAGTTGTGGGAACACGCCTTGGAGCAGTTAAGTAGATCTGTACCTTGTTTCAGAAGCATTGAAGAGAAGGTCTTCC
TGCCTTTGAAATTGAGCTACGACTTCTTGGAAGAAAAGCTAAAATCTTGTTTTCTTATGTGTGCTTTGTTTCCTGAAGAC
TACTCCATTGACGTTAAGGAGCTTGTGATGTACTGGATCGCTGAAGGATTCATGGATGAACAAGATTCCCATGAGGAATC
CATGAACGAAGGAATCACAATTGTAGAGAGCTTAAAAGACTACTGTCTATTAGAGGATGGTTGGCGCAGTGAGACAGTTA
AAATGCATGATGTTGTCCGAGATTTTGCGATATGGACTATGTCTTCCTCACAAGATGATTGCCACTCGCTAGTCCTGTCT
GGTAAAGGTTTGCAAGAGATTAGGCAAGACAAATTTGCTCCTTCGCTTCGAAGGGTTTCTTTGATGCACAATAATCTCGA
AAGGCTTCCTGGTCTCTCAGAGAAGTACTGCATGGAGGCCTCAACCTTACTGCTACAGGAGAACTATCTTCTACAAGAAG
CATCAGATGGGTTCTTGCAAGCATTCCCAGCTCTTAGGATTTTGAATCTAAGTGGGACATGCGTGAACTCCCTGCCCCAT
TCCTGTTTGCAGCTTTCCAAACTTCATTCTCTTTTCTTAAGAGGATGTACTAACCTTACCGAACTACCTTCTCTAGAAAC
TCTTGCTAAACTTGAGCTACTGGATCTACATGGCTCCCGTATCAAAGAATTCCCAAAAGGGCTAGAAAAGCTGGAGAGCT
TTAAACACCTTGATCTTTCAGGAACAGTTCACCTCAAAACTATTCCAGCTGGAATTGTTTCGCGGTTATCAAGTTTGGAG
ACACTAAACATGAAATTAAGTAACTACCATTGGAGTGTAAAAGGAGAAGAACAAGAAGGCCAAGCAACACTTGAAGAGAT
TGCATACCTTGACTGTCTACAGGTGCTGTCTATAAGTCTTATTTGTTCGCCGTCTTTTCTGAAGAAGAGCAACCCTTGGA
TCAAAAGACTAAAGAAATTTCAAATTAATGTGGGCTTTAGCTACGTTTTGCCTATGATACACGATGAGAGGACACTAGCA
ATAAGTAGTCTCAACTTATCACAAGTATCCATGGAGTGGCTCTTGGCTTGTACAACCTCTGTAATACTGAACAGTTGTCA
AGGGCTCCAAGGAATGATGAAGAAATTGGTCACTGGCAGCAAGACATTCGTGAATCTGAAATCTCTAACGATTGTGAAAA
CTAGTATCAACTCTAGTGGTGGTGGGATTGAGAAGGCAACCACCAAAAGTCGAGACACACTTCCATTTCTGGAGGAACTT
CGTCTGCACGAAGTTAACTTTGTATCCCTTTCGGAGTTACAAGCACAGCTAGGGTTGAGATTGGTAGCTCTTAAACTACT
TCTGGTCAGCAAGTGCAATAACCTTAAAACACTCGTTGAGATAGACATGTTCACTATGCCAAACCTGGAGGAGATGGAAA
TTAGCGACTGTGACTCCTTGCATCATCTACGCCAAACTATTGATGGTCCACAAGAACCTCTCCTACCAAAGTTACGTGTC
ATGAAACTGAGAAATCTTCCAGAGCTGGAGAGTGTTTGCTACGAAAAAGAGACTTGGGAGTGTCTCGAACAGGTGAAAGT
CATGAACTGTGGTCGGCTATATACTTTACCCATAAGCTCCAAAACTTGTGGAAGAATCAAGGAAATAAAAGGAGCTGTGA
GTTGGTGGAAACATTTGAGATGGGATGATCCTTCTTCTACTTTAAAAACTCTTGATCCTTGTTTCAAGCCATTAAGATTA
CTAGGTGAAGAAATGGCACCCATATTTGGGGAGCACTACTTGTGGGACAGTTGA
AA seq
Len:978 aa

MECLSPFLGEILRPMCDSMCSRVGNAIRFKSNVQALNSVMERLVELRGNINEDHKDKSFSLKLMGWQRKSDEVITEARSE
LDERVPCGMSLKSRLSRKLVTILNEARMLEKEGLDLLDMIAVATAHERVEHVPGVSVLHQTTASNMLGKIIDGLRSSEVQ
KIGIWGMGGVGKTTLVRTLNNKLHEETATQPFGLVIFATASKDFDPRTVQKQIAERLDIDTRLEETVERLARRIYARLEK
QTNFLLILDDVWKDIDLDLLGIPEEKKGSKIILTSRSLDVCRSMRTNLDIRVDCLCEEEAWELFCQNAGEVARSERIERS
AKAVSRECGGLPLAIITVGTAMRGKTDVKLWEHALEQLSRSVPCFRSIEEKVFLPLKLSYDFLEEKLKSCFLMCALFPED
YSIDVKELVMYWIAEGFMDEQDSHEESMNEGITIVESLKDYCLLEDGWRSETVKMHDVVRDFAIWTMSSSQDDCHSLVLS
GKGLQEIRQDKFAPSLRRVSLMHNNLERLPGLSEKYCMEASTLLLQENYLLQEASDGFLQAFPALRILNLSGTCVNSLPH
SCLQLSKLHSLFLRGCTNLTELPSLETLAKLELLDLHGSRIKEFPKGLEKLESFKHLDLSGTVHLKTIPAGIVSRLSSLE
TLNMKLSNYHWSVKGEEQEGQATLEEIAYLDCLQVLSISLICSPSFLKKSNPWIKRLKKFQINVGFSYVLPMIHDERTLA
ISSLNLSQVSMEWLLACTTSVILNSCQGLQGMMKKLVTGSKTFVNLKSLTIVKTSINSSGGGIEKATTKSRDTLPFLEEL
RLHEVNFVSLSELQAQLGLRLVALKLLLVSKCNNLKTLVEIDMFTMPNLEEMEISDCDSLHHLRQTIDGPQEPLLPKLRV
MKLRNLPELESVCYEKETWECLEQVKVMNCGRLYTLPISSKTCGRIKEIKGAVSWWKHLRWDDPSSTLKTLDPCFKPLRL
LGEEMAPIFGEHYLWDS*
Expression(FPKM)
Classification(Core/Distributed)
Function classfication (GO)
GO:0000166
Pfam
Leucine rich repeat
KEGG
disease resistance protein At4g27190-like; K13459 disease resistance protein RPS2 (A)