Names & Information
Knowledge of BnaA01G0176500NO:
| Gene Name | BnaA01G0176500NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA01g33780D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1 |
| NT seq | Len:2775 nt ATGGATCTTTACCTTCTCCTTGTGACAGTTGCTTCTACCATGTTTACGCTTTTGTGTAGTAAAATCTTTTCTATTGTTTA TGCAAAGTTCATAGTCCAAGAAAACAAAATAATTGCTTACTCTTCTTCATCTCCACCATCTCCAAAGTCGTCTTTGCCAC GTAACTGCATACATGATGTCTTCCCGAGCTTCCACGGAGCAGATGTCCGTAAATCCTTTCTCAGTCATTTTCTCAAGGAG CTTGGGAGCAAAGGAATCAACCTGTTCACTGATAAAGAGATCCCTAGAGGAGAGTTTATAGGCCCTGAGCTCAAGAAGGC AATCCAAGGATCAAGAATTGCGATTGTGTTGCTCTCGAAAAGATACGCTTCTTCATCGTGGTGTCTCGACGAGTTAGTGG AGATTATGAAGTGTAAGGAAGAGTTAGGTCAAACAGTGATGCCCATTTTCTATGAAGTGGATCCAAGTGATGTCAAGAAG CAGGCTGGTGAGTTTTGGAAAGTCTTTAAAGAAACATGTAAAGGTAAAACAAATGAGGTTATTGGAAAATGGAGTAAAGC TCTAGCAAAAGTGGCCACACTCGCTGGTTACCATTCAAATAACTGGGATAATGATGTAAAAATGATAGAAGATGTTGCCA CTGAGGTTGCAAACAAGTTGTTTAACTCCACGCCGTCAAGAGATTTCGAAGAATTCATTGGGATGGAAGCTCATATGGAG AAGATTTCGCCGGTTTTACGCACAGATTTGGATGAAGTGAGGATGATAGGGATTTGGGGGCCGGCTGGGATTGGCAAGAC CACCATTGCTAGGTGTCTGTTTAATCAACTATCAGATACATTTCAATACAGTGTCTTTATGATGAATGTCAAAGCAATGC ATACTCCACCGGTTTGTTCAGACGACTACAACGTGAAGTTGCACTTGCAGCAAAAGCTTTTGTCTCAACTAATCAACGAG AAGGAGGAGGATTTCAAGATTTCTCACTTGGGAGTTGCACGAGAAAGACTGAGTGACAAGAAAGTTCTTGTTGTTCTTGA TAACGTTGATCGGTTAGTACAACTAGAAGCCATGGCAAAAGAAACTCGGTGGTTTGGTCATGGAAGTCGGATTATCATTA CGACGCAAGATCGAAAGATTCTGAAGGCACATGGGATCACTCAAATATACAAGGTTGATTTTCCATCAGATCGTGAGGCT ATTCAGATGTTTTGTATGTATGCTTTTGGTCAAAAGTCCCCTGAAGATGGTTTTGAGAGACTTGTACGGGAAGTTACAAG ACTCGCCGGTAGACTCCCATTGGGACTAAGGGTTATGGGATCTTATTTTCGAGGAATGTTGAAGGAGGAGTGGGAAAACG CACTACCAGGGCTAAGGATGTGCCTTGATGGAGAAATTGAGAGCATTTTGATGTTCGGTTATAACGCACTATCTCATGAA AATAAAGATTTGTTTCTTCACATAGCCTGCTTTTTCAACAATGAGTGGATAGAGAAAGTGGTAGAGCATCTTTCAAAGAG ATTTACTGATGTGAGGCAACGGCTTAACGTCTTAGCTGAGAAGTCTGTCATATCTTTGGAAAGTGAACGTGTGAGTATGC ATGATCTGCTAGTCCAGCTAGGTAGAGATATTGTCCGCAAACAGTCCACGGAGCCTGGACAACGCCAGTTTTTGGTCGAT AACAGAGAGATTTGTGAAGTACTTGCTGATGATGCAGTGGGTAGTAGAAGTGTTATTGGCATAATATTCCGTGGAGACGA AATATATATGAGTGATAGAGCCTTTGAAGGAATGTCTAATCTCCAGTTCTTAAGATTAAACGTGGGACCTGATGGTGGAG GAGAAGCATTTCATCTATTTGGTGGACCAAGCTATTTATCTCGTAAACTTAGATTACTAGATTGGAGCTATTTTCCGATG ACATGTTTGCATTGTATTCCCAACCCAGAGCTCCTCGTGGAACTAATCATGTATGGCAGCAAACTTGAGAAGTTGTGGGA TGGAACTAAACCGCTTAGGAATCTCAAGTGGGTGGATCTGAGTGATTCAAAAAACTTGAAGGATGTTTCTAGTCTCTCAA CTGCCACTAGTCTACAGGAATTAGATCTCACAGGATGTTCAAGCTTAGTGGAGCTTCCATCTTCTATTGGGAATGCCATT CATCTCAAGAAGTTGCATCTCGGTGAATGTTCAAGTTTGGTAGAGCTCCCTTCCTCTATTGGGAATGCCATTCATCTCGA AAAAAACCTTGAGGAATTGGATTTAAGTGATTGCTCAAGTTTAGTGGGAGTCCCTTCCTCTATTGGAAACACCACTAATC TCAAGCGTTTGAAGTTTAGTAGATGCTCAAGTCTTGTGGAACTTCCTGCCTCTATTGGAAACCTCCATAAACTATACTCT TTGATTTTGAAAGAATGTTGCAAGCTGGAGGTTCTTCCTGTCAACATCACTGATTGCTCCTTGATGAAAAGTTCTCCTGA GATCTCAATAAACATCAAATCTATGTATCTCAGTGGAACTGCGAATAAACAAGTGCCTTCATCTATCAGGTTGTGGCCTC GTCTAGATGAATTGTCTTGCATATATGACGTGCATCTGTCATACTACGAGAACTTCAAGGAGTCTGCTCATGAGCAACAC AGAAGTACAAGAGAGTTCTCCTTGGATCAAGAGAATCTCTCGTCTTCGTCAACTTGTAGTCAAGGGATGCAAGGAGCTTT TGTCACTCCCACAGCTTCCAAGTTCATTATCAGAGCTAGACGCAGAAGATTGTGA |
| AA seq | Len:925 aa MDLYLLLVTVASTMFTLLCSKIFSIVYAKFIVQENKIIAYSSSSPPSPKSSLPRNCIHDVFPSFHGADVRKSFLSHFLKE LGSKGINLFTDKEIPRGEFIGPELKKAIQGSRIAIVLLSKRYASSSWCLDELVEIMKCKEELGQTVMPIFYEVDPSDVKK QAGEFWKVFKETCKGKTNEVIGKWSKALAKVATLAGYHSNNWDNDVKMIEDVATEVANKLFNSTPSRDFEEFIGMEAHME KISPVLRTDLDEVRMIGIWGPAGIGKTTIARCLFNQLSDTFQYSVFMMNVKAMHTPPVCSDDYNVKLHLQQKLLSQLINE KEEDFKISHLGVARERLSDKKVLVVLDNVDRLVQLEAMAKETRWFGHGSRIIITTQDRKILKAHGITQIYKVDFPSDREA IQMFCMYAFGQKSPEDGFERLVREVTRLAGRLPLGLRVMGSYFRGMLKEEWENALPGLRMCLDGEIESILMFGYNALSHE NKDLFLHIACFFNNEWIEKVVEHLSKRFTDVRQRLNVLAEKSVISLESERVSMHDLLVQLGRDIVRKQSTEPGQRQFLVD NREICEVLADDAVGSRSVIGIIFRGDEIYMSDRAFEGMSNLQFLRLNVGPDGGGEAFHLFGGPSYLSRKLRLLDWSYFPM TCLHCIPNPELLVELIMYGSKLEKLWDGTKPLRNLKWVDLSDSKNLKDVSSLSTATSLQELDLTGCSSLVELPSSIGNAI HLKKLHLGECSSLVELPSSIGNAIHLEKNLEELDLSDCSSLVGVPSSIGNTTNLKRLKFSRCSSLVELPASIGNLHKLYS LILKECCKLEVLPVNITDCSLMKSSPEISINIKSMYLSGTANKQVPSSIRLWPRLDELSCIYDVHLSYYENFKESAHEQH RSTREFSLDQENLSSSSTCSQGMQGAFVTPTASKFIIRARRRRL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |