Names & Information
Knowledge of BnaA01G0192500GG:
| Gene Name | BnaA01G0192500GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA01g18700D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:3729 nt ATGGATTCTGCTGCGTCTCCTTCATCCCTTCCATCCTCTGTGTCTCACAACTGGGAATATCGTGTCTTCCCGAGCTTCTG CGAGGAAGAAATTAGCAGAGGCTTTTTCGGTTACTTCAAGAAAGAGTTTGAAAGAAAGGGAATCAAACTATTCATTGACA GGAGGGAGTCTTTTGGTCCTGGGCTCATAGAAGCTATAAGAAGATCGAGGATAGCAATTGTTATTTTATCGAAGCACTAC GCTTCATCAACTTTGCGTCTGGACGAGTTAGTGGAGATCATGAAATGCAGGGAAGAGTTGGGAGCTGCAGATGTGAAGAA GCAGAGTGGATATTTTGGATCTGTCTTTGAGAAAGCTTGTGTGGGGAGATCAGTGGAGGACGTTGAGAAATGGAAACGAG CTCTGAACGAACTGTCCTTTATCTTTGGTTATCTTTCAGGGAACTGGAAAAGTGAGGATGATATGATGGAAGAAGTTGCA AATAATCTTTCAAACATGTTAAATAAGGCTGCCCCATCAACGGATTTCGATGGATTTGTTGGAATGGAGAATCATATCAC ACAGATAAGTTCACTGTTGTCATTAGATTTCGTTGATGACGTGAGGATGGTTGGAATCTGGGGTCCTGCAGGAATTGGGA AAACAACCGTAGCCCGAGCCTTATATTGGAAACTCTCTAATAATTTTGAAGTCACTGATTTTATGGAGAGTATAAGGGGA AGTCCTGAGAACCATCATCCGTTCGTTTTGAATTTACAAGAACAATATAGGAAAGTGCTTTTAGTTCTCGATGATGTACA TGATTCAAAGCAGCTAAAAGCCATGGCTGGCAATCCTCAGTGGTTTGGCCGCGGAAGCAGGATTATCATCACAACGAATG ATAAGAAACTTTTGAAGGCACATGGGATCGACCAAATATACCATGTGGAATTTCCATCAACATTGGAAGCTCTTGAAATC TTCTGTCTATATGCTTTTGATCAAAAGTCTCCCTATGATGGTTTTGAGGAGCTCTCCATGGAAATTACAGGACTTGCCGG CAATCTTCCTTTGGGTCTAAGTGTTTTTGGTTCATATCTACGAGGCATGTCAAAAGGAGAGTGGATGCATGCACTTCCTA GACTTAGGACAAGTCTCGATGCAAACACTGAGAAAGCATTAAGGTGCGACTATGAGACATTGTGTGATAAAGAAAAAGCT TTATTTCTCCATATAGCATGTTTTTTCAAAGGTGAGAGAACAAGCAATCTGGGAGAGTATTTTAGCAACTTGGACATCAG GCGTGGGCTTCAAGTCTTAGCTGAAAAATCTCTCATATCTATAGACAATGGGGCACGATTAGTGATGCACAATTTACTAG AACTACTGGGTTTAGAAATATCCCGTAAAGAATACATAGATGAGAATAGGAGACGTGCTCGGGAGATTGGTGATGTCCTC GCCGATGATACAGGATATGTATCTGCTCGAGGCACAGATCACGTCTTAACTGCAATCAAGGACGAAATAAGCATTGACGA GAGAGCCAATGAAAGGACACTTGACTCTTTACCGGCTCTTTCTCCTTTGCCTTCCAATTGTACACACCATGTCTTTGCTA GTTTTCGCGGGGTAGATGTTCGTAAAAGTTTCCTCCGTCACATGCTAATGGTGCTCAGAAACAAAGGAATCACCCTATTC ACTGATATTGAAATCGAGACGGGCACATCGATTGTTCATGAACTCAAAGAAGCTATACACCGATCGAGGATCTCAATTAT CCTAATATCAAATAAATCAGTGGAAGACGTTGAGAAATGGAAACGAGCTCTGGACGAAGTGTCCAATATCTTTCGTTATG TTTCAAGGAGCTGGGAAATGGAAGAAATTATCGAAAAAGTTGCTAACAATCTTTCAGACTTGTTATATGAGGATGTACCA TCAGGGGATTTTGACGGATTAGTTGGGATGGAGAATCATATCATGCAGATAAGTTCATTGTTGTCACTAGATTCCGATGA CGTGAGGATGGTTGGAATCTGGGGTCCTTCAGGAATTGGAAAAACGACCACCGCCCGAGCTTTATATAGGAAGCTCTCTA GTAATTTCACACACACTGCTTTCATGGAGAGCATAAAAGCAATTCGTGAAGAAATACACACTGACGACCATGCCTACATG TTGTATTTACAAGAAAAACTTTTGTGTCAAACCTTCAACCATATGGGTTTGGAGATACATCACTTGGGAGTGGCGGAAAA AAGGCTGAAGGATAAGAAAGTGCTTGTCGTTCTCGATGATGTAGATGATTTAAAGCAGCTAAAAGCCATGGCTAAAAAGA CTCAGTGGTTTGGCAATGGAAGCAGGATTATCATCACAACAACTGATAAGAAACTTTTGAAGGCACATGGGATCAATGAT ATTTACCACGTGGAGTTTCCATGTGCATCTGATGCTCTTGAAATCCTATGTCTACATGCTTTTGGTCAAAAGTCCCCATA TCTTGGTTTTGAGGAGCTCGCCATGGATGTTACACAACTTGCCGGTGATCTTCCGTTGGGTCTAAGTGTTTTTGGTTCAT ATCTGCGAGGAAGGTCGGAAGAAGAGTGGACAGCTGCACTTCCTAGATTTAGGACAAGTCTCGTGCCAGAACTTAAGGAT ATATTAAGGTGCGACTACGAGGCATTATGGGATAAAGAAAAATATTTATTCCTTCATATAGCATGTTTTTTCAATGGTAA GAAAACTACCAACATGGTAAAGCATCTTAGCAACTTGGACGTCACCCACGGGCTTCAGATTTTGACAGAAAAATCTCTCA TATCTATAGACAAAGATGGACGCTTGGTGATGCATAGTTTGCTTGAACAACTAGGTAAAGAAATTGCCCACAAAGAATAC AGAGATGAGTATGGGAGATGTAAGTTCGTAGTGGATGCTGGGGAGCTTGGTGACAGCATTGAGGGGAGCACCTATAAAGG GATCGAGTTCAAAAACAAAGGAATAACTGTATTCACTGATAATAACGATATTAAAAGAAGCATGTCGATTGGTCCTGAGC TCAAAGAAGCTATAAAAGGATCGAGGGTCTCGATTGTTATAGTGTCAAAGAATTATGCTTCTTCAACGTGGTGTCTGGAC GAGTTGGTGTTGATCATGAAGTGTAGGGAAGAGTTGGGTCAAATAGTAATGACCATGTTCTATGACGTAGAACCAACCGA TGTGAAGAAGCAGACGGGATATTTTGGGTCTGTCTTTAAGTCAACTTGTGTGGGGAAATCAGTGGAGGACGTAGAAAGAT GGAAACAAGCTCTGAAGGAAGTGGCCACGATCGCGGGTTTTGATTCAACCATCTGTTTTGATCTCTCCCTTGTTAGGAAA AATGAAGCAGAAATGATCGAAAATGTTGCTACCGATATTTCAAACAAGTTAAATATGGCTACGGCGTCAAGAGATTTCGA TGGATTAGTTGGGATGGAGAATCACATCACACAGATAAGTTCAATGTTGTCATTAGATTCCAATGACGTGAGGATGGTTG GAATCTTGGGTCCTGCAGGAATTGGGAAAACGACCATCGCCCGAGCCTTATATAACAAACTCTCTAATAGTTTCACACAC ACTGCTTTTATGGAGAGTATAAGGGGAACAGCTAAAAGCCATGGCTGGCAATTCTCAGTGGTTTGGCTGCGGAAGCAGGA TTATCATGACGACAAAGGCTGCACGTCTTTTAGAAGCACATGGTATTGA |
| AA seq | Len:1243 aa MDSAASPSSLPSSVSHNWEYRVFPSFCEEEISRGFFGYFKKEFERKGIKLFIDRRESFGPGLIEAIRRSRIAIVILSKHY ASSTLRLDELVEIMKCREELGAADVKKQSGYFGSVFEKACVGRSVEDVEKWKRALNELSFIFGYLSGNWKSEDDMMEEVA NNLSNMLNKAAPSTDFDGFVGMENHITQISSLLSLDFVDDVRMVGIWGPAGIGKTTVARALYWKLSNNFEVTDFMESIRG SPENHHPFVLNLQEQYRKVLLVLDDVHDSKQLKAMAGNPQWFGRGSRIIITTNDKKLLKAHGIDQIYHVEFPSTLEALEI FCLYAFDQKSPYDGFEELSMEITGLAGNLPLGLSVFGSYLRGMSKGEWMHALPRLRTSLDANTEKALRCDYETLCDKEKA LFLHIACFFKGERTSNLGEYFSNLDIRRGLQVLAEKSLISIDNGARLVMHNLLELLGLEISRKEYIDENRRRAREIGDVL ADDTGYVSARGTDHVLTAIKDEISIDERANERTLDSLPALSPLPSNCTHHVFASFRGVDVRKSFLRHMLMVLRNKGITLF TDIEIETGTSIVHELKEAIHRSRISIILISNKSVEDVEKWKRALDEVSNIFRYVSRSWEMEEIIEKVANNLSDLLYEDVP SGDFDGLVGMENHIMQISSLLSLDSDDVRMVGIWGPSGIGKTTTARALYRKLSSNFTHTAFMESIKAIREEIHTDDHAYM LYLQEKLLCQTFNHMGLEIHHLGVAEKRLKDKKVLVVLDDVDDLKQLKAMAKKTQWFGNGSRIIITTTDKKLLKAHGIND IYHVEFPCASDALEILCLHAFGQKSPYLGFEELAMDVTQLAGDLPLGLSVFGSYLRGRSEEEWTAALPRFRTSLVPELKD ILRCDYEALWDKEKYLFLHIACFFNGKKTTNMVKHLSNLDVTHGLQILTEKSLISIDKDGRLVMHSLLEQLGKEIAHKEY RDEYGRCKFVVDAGELGDSIEGSTYKGIEFKNKGITVFTDNNDIKRSMSIGPELKEAIKGSRVSIVIVSKNYASSTWCLD ELVLIMKCREELGQIVMTMFYDVEPTDVKKQTGYFGSVFKSTCVGKSVEDVERWKQALKEVATIAGFDSTICFDLSLVRK NEAEMIENVATDISNKLNMATASRDFDGLVGMENHITQISSMLSLDSNDVRMVGILGPAGIGKTTIARALYNKLSNSFTH TAFMESIRGTAKSHGWQFSVVWLRKQDYHDDKGCTSFRSTWY* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | TIR domain |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |