Names & Information

Knowledge of BnaA01G0198100ZS:

Gene Name
BnaA01G0198100ZS
Gene Location
Gene Structure
Protein Name
Alternative splicing
Homology
Best Hit (NR)
BnaA01g18700D [Brassica napus]
Best Hit (SwissProt)
Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1
NT seq
Len:3729 nt

ATGGATTCTGCTGCGTCTCCTTCATCCCTTCCATCCTCTGTGTCTCACAACTGGGAATATCGTGTCTTCCCGAGCTTCTG
CGAGGAAGAAATTAGCAGAGGCTTTTTCGGTTACTTCAAGAAAGAGTTTGAAAGAAAGGGAATCAAACTATTCATTGACA
GGAGGGAGTCTTTTGGTCCTGGGCTCATAGAAGCTATAAGAAGATCGAGGATAGCAATTGTTATTTTATCGAAGCACTAC
GCTTCATCAACTTTGCGTCTGGACGAGTTAGTGGAGATCATGAAATGCAGGGAAGAGTTGGGAGCTGCAGATGTGAAGAA
GCAGAGTGGATATTTTGGATCTGTCTTTGAGAAAGCTTGTGTGGGGAGATCAGTGGAGGACGTTGAGAAATGGAAACGAG
CTCTGAACGAACTGTCCTTTATCTTTGGTTATCTTTCAGGGAACTGGAAAAGTGAGGATGATATGATGGAAGAAGTTGCA
AATAATCTTTCAAACATGTTAAATAAGGCTGCCCCATCAACGGATTTCGATGGATTTGTTGGAATGGAGAATCATATCAC
ACAGATAAGTTCACTGTTGTCATTAGATTTCGTTGATGACGTGAGGATGGTTGGAATCTGGGGTCCTGCAGGAATTGGGA
AAACAACCGTAGCCCGAGCCTTATATTGGAAACTCTCTAATAATTTTGAAGTCACTGATTTTATGGAGAGTATAAGGGGA
AGTCCTGAGAACCATCATCCGTTCGTTTTGAATTTACAAGAACAATATAGGAAAGTGCTTTTAGTTCTCGATGATGTACA
TGATTCAAAGCAGCTAAAAGCCATGGCTGGCAATCCTCAGTGGTTTGGCCGCGGAAGCAGGATTATCATCACAACGAATG
ATAAGAAACTTTTGAAGGCACATGGGATCGACCAAATATACCATGTGGAATTTCCATCAACATTGGAAGCTCTTGAAATC
TTCTGTCTATATGCTTTTGATCAAAAGTCTCCCTATGATGGTTTTGAGGAGCTCTCCATGGAAATTACAGGACTTGCCGG
CAATCTTCCTTTGGGTCTAAGTGTTTTTGGTTCATATCTACGAGGCATGTCAAAAGGAGAGTGGATGCATGCACTTCCTA
GACTTAGGACAAGTCTCGATGCAAACACTGAGAAAGCATTAAGGTGCGACTATGAGACATTGTGTGATAAAGAAAAAGCT
TTATTTCTCCATATAGCATGTTTTTTCAAAGGTGAGAGAACAAGCAATCTGGGAGAGTATTTTAGCAACTTGGACATCAG
GCGTGGGCTTCAAGTCTTAGCTGAAAAATCTCTCATATCTATAGACAATGGGGCACGATTAGTGATGCACAATTTACTAG
AACTACTGGGTTTAGAAATATCCCGTAAAGAATACATAGATGAGAATAGGAGACGTGCTCGGGAGATTGGTGATGTCCTC
GCCGATGATACAGGATATGTATCTGCTCGAGGCACAGATCACGTCTTAACTGCAATCAAGGACGAAATAAGCATTGACGA
GAGAGCCAATGAAAGGACACTTGACTCTTTACCGGCTCTTTCTCCTTTGCCTTCCAATTGTACACACCATGTCTTTGCTA
GTTTTCGCGGGGTAGATGTTCGTAAAAGTTTCCTCCGTCACATGCTAATGGTGCTCAGAAACAAAGGAATCACCCTATTC
ACTGATATTGAAATCGAGACGGGCACATCGATTGTTCATGAACTCAAAGAAGCTATACACCGATCGAGGATCTCAATTAT
CCTAATATCAAATAAATCAGTGGAAGACGTTGAGAAATGGAAACGAGCTCTGGACGAAGTGTCCAATATCTTTCGTTATG
TTTCAAGGAGCTGGGAAATGGAAGAAATTATCGAAAAAGTTGCTAACAATCTTTCAGACTTGTTATATGAGGATGTACCA
TCAGGGGATTTTGACGGATTAGTTGGGATGGAGAATCATATCATGCAGATAAGTTCATTGTTGTCACTAGATTCCGATGA
CGTGAGGATGGTTGGAATCTGGGGTCCTTCAGGAATTGGAAAAACGACCACCGCCCGAGCTTTATATAGGAAGCTCTCTA
GTAATTTCACACACACTGCTTTCATGGAGAGCATAAAAGCAATTCGTGAAGAAATACACACTGACGACCATGCCTACATG
TTGTATTTACAAGAAAAACTTTTGTGTCAAACCTTCAACCATATGGGTTTGGAGATACATCACTTGGGAGTGGCGGAAAA
AAGGCTGAAGGATAAGAAAGTGCTTGTCGTTCTCGATGATGTAGATGATTTAAAGCAGCTAAAAGCCATGGCTAAAAAGA
CTCAGTGGTTTGGCAATGGAAGCAGGATTATCATCACAACAACTGATAAGAAACTTTTGAAGGCACATGGGATCAATGAT
ATTTACCACGTGGAGTTTCCATGTGCATCTGATGCTCTTGAAATCCTATGTCTACATGCTTTTGGTCAAAAGTCCCCATA
TCTTGGTTTTGAGGAGCTCGCCATGGATGTTACACAACTTGCCGGTGATCTTCCGTTGGGTCTAAGTGTTTTTGGTTCAT
ATCTGCGAGGAAGGTCGGAAGAAGAGTGGACAGCTGCACTTCCTAGATTTAGGACAAGTCTCGTGCCAGAACTTAAGGAT
ATATTAAGGTGCGACTACGAGGCATTATGGGATAAAGACAAATATTTATTCCTTCATATAGCATGTTTTTTCAATGGTAA
GAAAACTACCAACATGGTAAAGCATCTTAGCAACTTGGACGTCACCCACGGGCTTCAGATTTTGACAGAAAAATCTCTCA
TATCTATAGACAAAGATGGACGCTTGGTGATGCATAGTTTGCTTGAACAACTAGGTAAAGAAATTGCCCACAAAGAATAC
AGAGATGAGTATGGGAGATGTAAGTTCGTAGTGGATGCTGGGGAGCTTGGTGACAGCATTGAGGGGAGCACCTATAAAGG
GATCGAGTTCAAAAACAAAGGAATAACTGTATTCACTGATAATAACGATATTAAAAGAAGCATGTCGATTGGTCCTGAGC
TCAAAGAAGCTATAAAAGGATCGAGGGTCTCGATTGTTATAGTGTCAAAGAATTATGCTTCTTCAACGTGGTGTCTGGAC
GAGTTGGTGTTGATCATGAAGTGTAGGGAAGAGTTGGGTCAAATAGTAATGACCATGTTCTATGACGTAGAACCAACCGA
TGTGAAGAAGCAGACGGGATATTTTGGGTCTGTCTTTGAGTCAACTTGTGTGGGGAAATCAGTGGAGGACGTAGAAAGAT
GGAAACAAGCTCTGAAGGAAGTGGCCACGATCGCGGGTTTTGATTCAACCATCTGTTTTGATCTCTCCCTTGTTAGGAAA
AATGAAGCAGAAATGATCGAAAATGTTGCTACCGATATTTCAAACAAGTTAAATATGGCTACGGCGTCAAGAGATTTCGA
TGGATTAGTTGGGATGGAGAATCACATCACACAGATAAGTTCAATGTTGTCATTAGATTCCAATGACGTGAGGATGGTTG
GAATCTTGGGTCCTGCAGGAATTGGGAAAACGACCATCGCCCGAGCCTTATATAACAAACTCTCTAATAGTTTCACACAC
ACTGCTTTTATGGAGAGTATAAGGGGAACAGCTAAAAGCCATGGCTGGCAATTCTCAGTGGTTTGGCTGCGGAAGCAGGA
TTATCATGACGACAAAGGCTGCACGTCTTTTAGAAGCACATGGTATTGA
AA seq
Len:1243 aa

MDSAASPSSLPSSVSHNWEYRVFPSFCEEEISRGFFGYFKKEFERKGIKLFIDRRESFGPGLIEAIRRSRIAIVILSKHY
ASSTLRLDELVEIMKCREELGAADVKKQSGYFGSVFEKACVGRSVEDVEKWKRALNELSFIFGYLSGNWKSEDDMMEEVA
NNLSNMLNKAAPSTDFDGFVGMENHITQISSLLSLDFVDDVRMVGIWGPAGIGKTTVARALYWKLSNNFEVTDFMESIRG
SPENHHPFVLNLQEQYRKVLLVLDDVHDSKQLKAMAGNPQWFGRGSRIIITTNDKKLLKAHGIDQIYHVEFPSTLEALEI
FCLYAFDQKSPYDGFEELSMEITGLAGNLPLGLSVFGSYLRGMSKGEWMHALPRLRTSLDANTEKALRCDYETLCDKEKA
LFLHIACFFKGERTSNLGEYFSNLDIRRGLQVLAEKSLISIDNGARLVMHNLLELLGLEISRKEYIDENRRRAREIGDVL
ADDTGYVSARGTDHVLTAIKDEISIDERANERTLDSLPALSPLPSNCTHHVFASFRGVDVRKSFLRHMLMVLRNKGITLF
TDIEIETGTSIVHELKEAIHRSRISIILISNKSVEDVEKWKRALDEVSNIFRYVSRSWEMEEIIEKVANNLSDLLYEDVP
SGDFDGLVGMENHIMQISSLLSLDSDDVRMVGIWGPSGIGKTTTARALYRKLSSNFTHTAFMESIKAIREEIHTDDHAYM
LYLQEKLLCQTFNHMGLEIHHLGVAEKRLKDKKVLVVLDDVDDLKQLKAMAKKTQWFGNGSRIIITTTDKKLLKAHGIND
IYHVEFPCASDALEILCLHAFGQKSPYLGFEELAMDVTQLAGDLPLGLSVFGSYLRGRSEEEWTAALPRFRTSLVPELKD
ILRCDYEALWDKDKYLFLHIACFFNGKKTTNMVKHLSNLDVTHGLQILTEKSLISIDKDGRLVMHSLLEQLGKEIAHKEY
RDEYGRCKFVVDAGELGDSIEGSTYKGIEFKNKGITVFTDNNDIKRSMSIGPELKEAIKGSRVSIVIVSKNYASSTWCLD
ELVLIMKCREELGQIVMTMFYDVEPTDVKKQTGYFGSVFESTCVGKSVEDVERWKQALKEVATIAGFDSTICFDLSLVRK
NEAEMIENVATDISNKLNMATASRDFDGLVGMENHITQISSMLSLDSNDVRMVGILGPAGIGKTTIARALYNKLSNSFTH
TAFMESIRGTAKSHGWQFSVVWLRKQDYHDDKGCTSFRSTWY*
Expression(FPKM)
Classification(Core/Distributed)
Function classfication (GO)
GO:0000166
Pfam
TIR domain
KEGG
disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A)