Names & Information
Knowledge of BnaA01G0203300GG:
| Gene Name | BnaA01G0203300GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA01g33780D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1 |
| NT seq | Len:3339 nt ATGGATCTTTACCTTCTCCTTGTGACAGTTGCTTCTACCATGTTTACGCTTTTGTGTAGTAAAATCTTTTCTATTGTTTA TGCAAAGTTCATAGTCCAAGAAAACAAAATAATTGCTTACTCTTCTTCATCTCCACCATCTCCAAAGTCGTCTTTGCCAC GTAACTGCATACATGATGTCTTCCCGAGCTTCCACGGAGCAGATGTCCGTAAATCCTTTCTCAGTCATTTTCTCAAGGAG CTTGGGAGCAAAGGAATCAACCTGCCCATCACTAATACTGATAAAGAGATCCCTAGAGGAGAGTTTATAGGCCCTGAGCT CAAGAAGGCAATCCAAGGATCAAGAATTGCGATTGTGTTGCTCTCGAAAAGATACGCTTCTTCATCGTGGTGTCTCGACG AGTTAGTGGAGATTATGAAGTGTAAGGAAGAGTTAGGTCAAACAGTGATGCCCATTTTCTATGAAGTGGATCCAAGTGAT GTCAAGAAGCAGGCTGGTGAGTTTTGGAAAGTCTTTAAAGAAACATGTAAAAGTAAAACAAATGAGGTTATTGGAAAATG GAGTAAAGCTCTAGCAAAAGTGGCCACACTCGCTGGTTACCATTCAAATAACTGGGATAATGATGTAAAAATGATAGAAG ATGTTGCCACTGAGGTTGCAAACAAGTTGTTTAACTCCACGCCGTCAAGAGATTTCGAAGAATTCATTGGGATGGAAGCT CATATGGAGAAGATTTCGCCGGTTTTACGCACAGATTTGGATGAAGTGAGGATGATAGGGATTTGGGGGCCGGCTGGGAT TGGCAAGACCACCATTGCTAGGTGTCTGTTTAATCAACTATCAGATACATTTCAATACAGTGTCTTTATGATGAATGTCA AAGCAATGCATACTCCACCGGTTTGTTCAGACGACTACAACGTGAAGTTGCACTTGCAGCAAAAGCTTTTGTCTCAACTA ATCAACGAGAAGGAGGAGGATTTCAAGATTTCTCACTTGGGAGTTGCACGAGAAAGACTGAGTGACAAGAAAGTTCTTGT TGTTCTTGATAACGTTGATCGGTTAGTACAACTAGAAGCCATGGCAAAAGAAACTCGGTGGTTTGGTCATGGAAGTCGGA TTATCATTACGACGCAAGATCGAAAGATTCTGAAGGCACATGGGATCACTCAAATATACAAGGTTGATTTTCCATCAGAT CGTGAGGCTATTCAGATGTTTTGTATGTATGCTTTTGGTCAAAAGTCCCCTGAAGATGGTTTTGAGAGACTTGTACGGGA AGTTACAAGACTCGCCGGTAGACTCCCATTGGGACTAAGGGTTATGGGATCTTATTTTCGAGGAATGTTGAAGGAGGAGT GGGAAAACGCACTACCAGGGCTAAGGATGTGCCTTGATGGAGAAATTGAGAGCATTTTGATGTTCGGTTATAACGCACTA TCTCATGAAAATAAAGATTTGTTTCTTCACATAGCCTGCTTTTTCAACAATGAGTGGATAGAGAAAGTGGTAGAGCATCT TTCAAAGAGATTTACTGATGTGAGGCAACGGCTTAACGTCTTAGCTGAGAAGTCTGTCATATCTTTGGAAAGTGAACGTG TGAGTATGCATGATCTGCTAGTCCAGCTAGGTAGAGATATTGTCCGCAAACAGTCCACGGAGCCTGGACAACGCCAGTTT TTGGTCGATAACAGAGAGATTTGTGAAGTACTTGCTGATGATGCAGCGGGTAGTAGAAGTGTTATTGGCATAATATTCCG TGGAGACGAAATATATATGAGTGAGAGAGCCTTTGAAGTAATGTCTAATCTCCAGTTCTTAAGATTAAACGTGGGACCTG ATGGTGGAGGAGAAGCATTTCATCTATTTGGTGAACCAAGCTATTTATCTCGTAAACTTAGATTACTAGATTGGAGCTAT TTTCCGATGACATGTTTGCATTGTATTCCCAACCCAGAGCTCCTCGTGGAACTAATCATGTATGGCAGCAAACTTGAGAA GTTGTGGGATGGAACTAAACCGCTTAGGAATCTCAAGTGGGTGGATCTGAGTGATTCAAAAAACTTGAAGGATGTTTCTA GTCTCTCAACTGTCACTAGTCTACAGGAATTAGATCTCACAGGATGTTCAAGTTTAGTGGAGCTTCCATCTTCTATTGGG AATGCCATTCATCTCATGAAGTTGCATCTCGGTGAATGTTCAAGTTTGGTAGAGCTCCCTTTCTCTATTGGGAATGCCAT TCATCTCGAAAAGTTGGATCTCACTGGATGTTCAAGTTTGGTAGAGCTTCCTTCCTCTATTGGGAATGCAACTAATCTCG AGTTTCTGTCTCTTCGTAGTTGTTCAAGGTTGGTGGAGCTCCCCTCATGTTTTGGTAATATAAGAAACCTTGAGGAATTG GATTTAAGTGATTGCTCAAGTTTAGTGGGAGTCCCTTCCTCTATTGGAAACACCACTAATCTCAAGCATTTGAAGTTTAG TAGATGCTCAAGTCTTGTGGAACTTCCTGCCTCTATTGGAAACCTCCATAAACTATACTCTTTGATTTTGAAAGAATGTT GCAAGCTGGAGGTTCTTCCTGTCAACATCACTGATTGCTCCTTGATGAAAAGTTCTCCTGAGATCTCAACAAACATCAAA TCTATGTATCTTAGTGGAACTGCGAATAAACAAGTGCCTTCATCTATCAGGTTGTGGTCTCGTCTAGATGAATTGTCTTG CATATATGACGTGCATCTGTCATACTACGAGAACTTCAAGGAGTTCCCTCACGTTCTTGACATCCTAACAGGTCTGCTCA TGAGCAACACAGAAGTACAAGAGAGTTCTCCTTGGATCAAGAGAATCTCTCGTCTTTGTCAACTTGTAGTCAAGGGATGC AAGGAGCTTTTGTCACTCCCACAGCTTCCAAGTTCATTATCAGAGCTAGACGCAGAAGATTGTGAGGGTATAGAGACACT AGATTTCTCCTTTTTTAATCAAAAGATTGCTCTCAACTTCGCCAACTGCTTCAAACTGAATAAAGAAGCGAGAGATGTCA TCATCCAGACGTCGACTAATTATATAACGATGTTACCCGGTAAAGAAATGCCTAACTACTTCAATTATCAAGCTAATGGA GGTTCCCTAGTAATAAAGTTGAATGAGAGGCCTTTCCCTTCACCAATGATATGTAAGGCTTGCATATTGCTGGTTAGTAA AGATGAGGTTGAAGCTGCTAAAGGTCAAAGGGTGTATGTACATCATCGGATCAAACAGAATAGCCTCGATGTCCCGTGCA ATCGAAGTGAACTCGTTCTGTTTCGTCCTTTAACGGAACGAACATCTGTACATCTTTGA |
| AA seq | Len:1113 aa MDLYLLLVTVASTMFTLLCSKIFSIVYAKFIVQENKIIAYSSSSPPSPKSSLPRNCIHDVFPSFHGADVRKSFLSHFLKE LGSKGINLPITNTDKEIPRGEFIGPELKKAIQGSRIAIVLLSKRYASSSWCLDELVEIMKCKEELGQTVMPIFYEVDPSD VKKQAGEFWKVFKETCKSKTNEVIGKWSKALAKVATLAGYHSNNWDNDVKMIEDVATEVANKLFNSTPSRDFEEFIGMEA HMEKISPVLRTDLDEVRMIGIWGPAGIGKTTIARCLFNQLSDTFQYSVFMMNVKAMHTPPVCSDDYNVKLHLQQKLLSQL INEKEEDFKISHLGVARERLSDKKVLVVLDNVDRLVQLEAMAKETRWFGHGSRIIITTQDRKILKAHGITQIYKVDFPSD REAIQMFCMYAFGQKSPEDGFERLVREVTRLAGRLPLGLRVMGSYFRGMLKEEWENALPGLRMCLDGEIESILMFGYNAL SHENKDLFLHIACFFNNEWIEKVVEHLSKRFTDVRQRLNVLAEKSVISLESERVSMHDLLVQLGRDIVRKQSTEPGQRQF LVDNREICEVLADDAAGSRSVIGIIFRGDEIYMSERAFEVMSNLQFLRLNVGPDGGGEAFHLFGEPSYLSRKLRLLDWSY FPMTCLHCIPNPELLVELIMYGSKLEKLWDGTKPLRNLKWVDLSDSKNLKDVSSLSTVTSLQELDLTGCSSLVELPSSIG NAIHLMKLHLGECSSLVELPFSIGNAIHLEKLDLTGCSSLVELPSSIGNATNLEFLSLRSCSRLVELPSCFGNIRNLEEL DLSDCSSLVGVPSSIGNTTNLKHLKFSRCSSLVELPASIGNLHKLYSLILKECCKLEVLPVNITDCSLMKSSPEISTNIK SMYLSGTANKQVPSSIRLWSRLDELSCIYDVHLSYYENFKEFPHVLDILTGLLMSNTEVQESSPWIKRISRLCQLVVKGC KELLSLPQLPSSLSELDAEDCEGIETLDFSFFNQKIALNFANCFKLNKEARDVIIQTSTNYITMLPGKEMPNYFNYQANG GSLVIKLNERPFPSPMICKACILLVSKDEVEAAKGQRVYVHHRIKQNSLDVPCNRSELVLFRPLTERTSVHL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |