Names & Information

Knowledge of BnaA01G0230400ZS:

Gene Name
BnaA01G0230400ZS
Gene Location
Gene Structure
Protein Name
Alternative splicing
Homology
Best Hit (NR)
BnaA01g19960D [Brassica napus]
Best Hit (SwissProt)
Putative disease resistance RPP13-like protein 3 OS=Arabidopsis thaliana GN=RPP13L3 PE=3 SV=1
NT seq
Len:1194 nt

ATGCAATGGGTCGTCGATGAGGATCTGCATAGAATTGGCAAAGAAATGGTTCAAAAATGCGATGGTTTACCTCTTGCTAT
TGTCGTTCTTGTTGGGCTATTGTCTAAGAAGAGGCCAAACGAGGGGCATGAGGTGTATGCCAGTGTCTGGCGATTCCTAA
AGGATGACTATATTCACATATCCACTGTATTTTATTTAAGTTTCAACGAGCTGCATCATGAGTTGAAACTCTGCTTTCTT
TATCTTAGCGTCTTCCCTGAGGACTATGAGATTGATGTGGAGAAATTAATACATTTACTTGTCGCTGAAGGGTTTATACA
AGAGGATGGAGAAATGATGATGGAAGACGTGGCTCGGCATTACATGGAAGAGCTGATAGACAGAAGGTTAGTGGAAGCTG
TGAGGAGAGCAAGAGGAAAAGTGGTGTTTTGTAGAATCCATTATCTTCTTAGAGACGTGGCTATCAAGAAAGCAAAAGAG
ATCAACTTTGTAAATGTTGTTTATAACGAGCATCATTCTTCAACTACTTGCAGAAGAGAAGTGGTTCACCATCTTATGGA
CAACAACTACTTGTGTGACAGACGTGTGAACAAACGGATGCGGTCTTTCTTGTTCATTGGAGAGCAGAAGCGAATGCTGG
GAAGTTATGTTAAGACCACAAACTTGAAACTGAAGCTACTTAGAGTGCTTAATCTCAGAGGGCTTCTGTTTGATTGTGAA
GGATACATCCCATTTATGAGTTTACCAGATGTGATATGCGAGTTAATACACTTGAGGTATCTTGGTGTAGCTGATACTGG
TCTTAGACATTTACCATCTTTGATCTCCAACTTACAGTTTCTACAGACACTAGATGCATCAGGCAACCGGTTTGAGGGAA
TGACTGATCTACGTAGGCTCACGTCACTAAGGCACCTCATGGGAAGATTACTAATAGGAGATGCGGTTAACCTTCAGACT
TTAAGGTGTATCTCCTCCTATAGCTCGAGTAAACTACAACATAAGTCATTCAAAAACCTTCGAGACTTGGAGATATATGA
TTCCGGGTATGTAGAGCTGAGAAGAGTTCGTTTGGACTTGAGTTCCTTCTCTATACTGAAAAATCTTCCTGCCTTAACTC
TTGAGAGTACCGACCTTCAGAATATCATCAGAAGCAGTTGTGTTCCACATGGATGTGTTCTTTCCCAGTCTTGA
AA seq
Len:398 aa

MQWVVDEDLHRIGKEMVQKCDGLPLAIVVLVGLLSKKRPNEGHEVYASVWRFLKDDYIHISTVFYLSFNELHHELKLCFL
YLSVFPEDYEIDVEKLIHLLVAEGFIQEDGEMMMEDVARHYMEELIDRRLVEAVRRARGKVVFCRIHYLLRDVAIKKAKE
INFVNVVYNEHHSSTTCRREVVHHLMDNNYLCDRRVNKRMRSFLFIGEQKRMLGSYVKTTNLKLKLLRVLNLRGLLFDCE
GYIPFMSLPDVICELIHLRYLGVADTGLRHLPSLISNLQFLQTLDASGNRFEGMTDLRRLTSLRHLMGRLLIGDAVNLQT
LRCISSYSSSKLQHKSFKNLRDLEIYDSGYVELRRVRLDLSSFSILKNLPALTLESTDLQNIIRSSCVPHGCVLSQS*
Expression(FPKM)
Classification(Core/Distributed)
Function classfication (GO)
GO:0043531
Pfam
NB-ARC domain
KEGG
disease resistance protein RPP13-like; K13457 disease resistance protein RPM1 (A)