Names & Information
Knowledge of BnaA01G0248200GG:
| Gene Name | BnaA01G0248200GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: protein PHLOEM PROTEIN 2-LIKE A5-like isoform X2 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein LAZ5 OS=Arabidopsis thaliana GN=LAZ5 PE=1 SV=1 |
| NT seq | Len:1452 nt ATGTCTAAAACTTGGAGGATGTCTTTGAATTTGGGTTTAAAACTTGGGTTTGCTCGAAGAAACGTTCGTCCAAGAAAAAT GCAAGACATCGAAGAAGGTTTGAGAGAGGGTTTTGGTGTATCTGCAGCAGTTCTCACCAGGTCTGGGCATATTTCCCGGA TCCGAAGATCCGAACCGGTAATTACCCGAAAAATTGGGTTTCGGATCGGAGTCGGATATAGGAAAATACCCGGTCGGATA AGGTTTAAAATCTGGTCGGGTACCGGATCGGATACGGGTATTATCCGGGATCCGTACGGATATTTAGAATATCTTTGGTT CTTTTGGATTAAATTCGGTTCTATCGGGTTAAATAGTTTGGTATATTCAAAGAACCGGACCGAATCCGTTAATATTTTGG TTACTACGGATGTAACCGGATCCGAATCGGATCCGACAGATGGATCGAATCTAAAACGTGTTAGCGTCCCAGCCCTGCTC TTTACCACCCGACCACAATCACCCGGTCAAGGGATACAAATTTATCTCATGGGGCCGCGTGAGACCGCGTACTTCAGTGT GAATCATATGCAGACGTGGACCTTTTTTCTTTTTTCTCTTGTTGTTGGTTTTATTCATACTCAAACTTACACTTGTTTTC TAGAATCTAGCAGTCACTGCCATATGACAAAAGTCGTAGTCTCCTTCATAGAGATTCGACTAAATGTGTTCCTCAATTAT CGAGGAGACCAGTTACGCTATGGGTTCGTCAGTCACCTTATAGACGCCTTTGAGAGATACGGGATCATGTTCTTTATAGA TAAACACGAGCAAAGGGGCAAAGATTTGACAAACCTCTTTGTAAGGATGAAAGAGTCTAAGATCGCGCTGGTAATCTTCT CTAGCAGCATTAGTCGTAGTCCGAGTTTTGGTAATAAGTCTTCTAAAGTTGATGTATTGATTGTATGTCTCCGCAGGTAC GCAGAGTCCAGCTGGTGCATGGATGAGCTTGTGAATATAAAGAAACGTGCAGAGAAAGGAAAGCTCGAAGTTATTCCCAT CTTTTACAAGGTTAGGGCAAAAGATGTGAGAGCACAAGCAGGCAAGTTTGGTGACAAATTTTGGGCGCTAGCAAAGGTTT CTAGTGGAGATCAGATCAAGAAGTGGAAGGATGCACTAGAATGTATCTCCAATAAGATGGGTTTGTCCTTGAGAGACAAA AGTTCCGAAGCTGATTTTATCAAGGGGATTGTTAAGGAAGTGGAAAGAGTTAGAACTGCCACTGTTCGCGGGGGTGCACA AAGTCATCATTGTATCAAGTTTATCCCGAATAAAAGGATAAAGATTTCCAAAAAATTTCCAGAAGATGAGGCGAAAAGTG TTGAAATTGCCCATATGAATTTCTCTAACGCAACAGGGGAAGAGGAGCCAAGTCAAGAAGTTCTGGTACTTAATCATGAT TTTGTTAAATAA |
| AA seq | Len:484 aa MSKTWRMSLNLGLKLGFARRNVRPRKMQDIEEGLREGFGVSAAVLTRSGHISRIRRSEPVITRKIGFRIGVGYRKIPGRI RFKIWSGTGSDTGIIRDPYGYLEYLWFFWIKFGSIGLNSLVYSKNRTESVNILVTTDVTGSESDPTDGSNLKRVSVPALL FTTRPQSPGQGIQIYLMGPRETAYFSVNHMQTWTFFLFSLVVGFIHTQTYTCFLESSSHCHMTKVVVSFIEIRLNVFLNY RGDQLRYGFVSHLIDAFERYGIMFFIDKHEQRGKDLTNLFVRMKESKIALVIFSSSISRSPSFGNKSSKVDVLIVCLRRY AESSWCMDELVNIKKRAEKGKLEVIPIFYKVRAKDVRAQAGKFGDKFWALAKVSSGDQIKKWKDALECISNKMGLSLRDK SSEADFIKGIVKEVERVRTATVRGGAQSHHCIKFIPNKRIKISKKFPEDEAKSVEIAHMNFSNATGEEEPSQEVLVLNHD FVK* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | TIR domain |
| KEGG | hypothetical protein; K04646 clathrin heavy chain (A) |