Gene Name | BnaA01G0268300ZS |
Gene Location | |
Gene Structure | |
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Protein Name | |
Alternative splicing | |
Homology | |
Best Hit (NR) | PREDICTED: probable disease resistance protein At1g59620 [Brassica rapa] |
Best Hit (SwissProt) | Probable disease resistance protein At1g59620 OS=Arabidopsis thaliana GN=At1g59620 PE=2 SV=3 |
NT seq | Len:2703 nt
ATGGCGGACTCACTTTTATCATTTGGAGTCGAAAAGCTTTGGGACCTCCTTGTCAGAGAGTCTGAGCGACTTCAAGGGGT
TGATGATCAGATCAATGGACTAAAGAGTGATTTAAATATGTTGAAGTGCTTTTTGGAAGATGCAGAAGCCAAGAAACACA
CAAGTGCAATGGTGAGAAACACTGTGAAAGAGATCAAAGAAATTGTTTATGACGCAGAAGATATAATCGAAATCTTTCTT
CTGGAGGAAGGACTAGGAAAAACAAGTAGCATCAGGAAGAGAGTGAGAAGATTTCCTCGCGTTATGGTGAAACGCATGGG
GCTTGCTTTCGATATGAAAGCCATAAGCAATAGAATATCTAAGGTGATCCGTGATATGCAGAGTCTTGGCGTGCAACAAG
TCATTGTCAATGAAACGTATGCACAGGAGAGACAAAAGGAAATGCGCCAAACTTTTTCCAGTGATACTGAAGACCATCTT
GTGGGTTTGGAGGAGAATGTTGAGCAATTAGTTGGCTATTTGGCGGATGAAGATAGTAGCAGCCAAGTGGTTTCCATAAC
GGGGATGGGCGGTATTGGTAAAACCACCCTCGCAAGACAAGTTTTTAATCATGAGATAGTAAAAAGCCATTTTCCAGGAC
TCGCGTGGGTATCTATCTCACAACAGTTTACAAGGAAGTATGTGTGGCAGACGATCTTGCGGAAACTTAGGCGAGAATAT
AAGGTGTTAGAGATGACAGAAGATGAACTCCAAGAAGAACTTGTTCGGCTGTTGGGAATACAAAAGACTTTGATTGTCCT
TGATGATATATGGAGAGAAGGAGACTGGGACATAATAAAACCAATATTTCCACGACACAAAGGTTGGAAGATACTTCTTA
CTTCCCGCAACGAGGGTGTAGCATTACGAGCAGATCCAAAATGTTTCACTTTTAAGCCAAATTGTCTAACTCTCGATGAA
TGTTGGTATATTTTTCGGAGGATAGCATTTCCTAGGAGCGACACGGCCCAACTTAAGGTTGATGAAATGGAGAAGATGGG
TAAGCAAATGATCAAACACTGTGGAGGACTACCTTTGGCAGTGAAACTGTTAGGAGGTTTGCTAGCTTCCCAATACACAT
TGCATCAATGGAAAAGGATATATGAGAATATAAGATCTCACATCATTGGAGGGACTAGTTACAATGGCGACAACAACAAT
TTGGTTTATCATGTATTATCTTTGAGTTTCGAAGAGTTGCCTAGTTGTTTGAAGCATTGCTTCCTCTACTTGGCTCATTT
TCCAGAAGATTGTCCAGTAGATGTTGAGAAACTGGCCTACTACTGGGCCGCGGAAAGAATGCCAAAACCGGAGTATTATG
AAAGAACAAGTGTTCGAGATGTTGTTGATGGCTACATAGAAGAGTTGGTTAAAAGAAATATGGTCATCTCCGAAAGAGAT
GGTATGACTTTGAGATTTGAAAAGTGTCACTTGCATGATACGATGAGAGAAGTTTGTCTTATTAAAGCCAAAGAAGAGAA
CTTTCTACAAATTGTTCATGGCACCACCTCTAAATCTTCTTGTAAATCTCGCAGACTCGCTATACATCGGCTTGATAAAA
CATTTGATGAAGAGATGGAGATAAACAATCCAAAACTTAGATCTCTCTTGGTTATCTTGAAGGACATGAGAACAGATTGG
ATGGTACCAGGTTTGCGCTTTACCGGGCTAAAGTTGATGAGGGTTTTAGATCTCTCTAAAGCTCAATTTGATGGAGGGGA
GTTACCCTCAAGCATTGGAAATCTCATTCACTTGAGATACTTGAGTTTATATATGGCACATGTAACTCATCTACCTTCTT
CTATGCGGAAACTGAAGTTGCTGATCTATTTAAACCTATGTGTTGATGCTAGATGTTCACTCTACATGCCCAATTTCTTG
AAAAAGATGCGAGAATTGACAACCCTCTGGTTTCCATTGAGGATACATGACAAGGTAAAGATGGAATTGGGCAATCTAGT
CAATCTGGAGACGTTAGAGAATTTCTCAACAGAGCATGGGAGTGTGTGTGATATCCAGGGAATGACAAGGCTCAAAACCC
TCTCTATCTCATTCAATGGCAAGGGGTGTACTATGGAAACCCTATCTTCATCTCTGAGTGAATTGAGACACTTGGAAAAT
CTTAATATATATGATGCTTATAAGTTGTATGCTCCCACAGTTGATGAAGAAGGATTTTGTTTTGATTGCAAGAATCTCAA
ACAGCTCAAGTTGAGTATATGTATGCCAAGGTTACCTGATGCGCAACGCTTCCCTTCTCACCTTAGAAGCATAACTTTAC
GTGGTTGTTGCTTAGAGGAGGATCCAATCCTGATTCTAGAGAAGCTTCTTCACTTATATGATGTCAGTTTACTAAATATA
TCTTTCTGTGGGAGGAGAATGGTTTGCTCGAGTGGTGGGTTTCCCCAACTGCATAAGCTTGAATTTGGTGGATTAGCTGA
GTGGGAAGAGTGGATTGTAGAAGAAGGCTCCATGCCCTTTCTTCAAACTCTGACTATTCATAATTGTCGAAAGTTGATGG
AGCTTCCTGATGGGCTGAGGTTTGTCACTTCCTTGGAAGAACTGGATATGAACACACATACATTAGAATTTTGGAAGAAA
TTGTCCATAGGAGGAGAAGAATACTACAAAGTCCAACACATACCTCTTTTGAATATCGTCTAA |
AA seq | Len:901 aa
MADSLLSFGVEKLWDLLVRESERLQGVDDQINGLKSDLNMLKCFLEDAEAKKHTSAMVRNTVKEIKEIVYDAEDIIEIFL
LEEGLGKTSSIRKRVRRFPRVMVKRMGLAFDMKAISNRISKVIRDMQSLGVQQVIVNETYAQERQKEMRQTFSSDTEDHL
VGLEENVEQLVGYLADEDSSSQVVSITGMGGIGKTTLARQVFNHEIVKSHFPGLAWVSISQQFTRKYVWQTILRKLRREY
KVLEMTEDELQEELVRLLGIQKTLIVLDDIWREGDWDIIKPIFPRHKGWKILLTSRNEGVALRADPKCFTFKPNCLTLDE
CWYIFRRIAFPRSDTAQLKVDEMEKMGKQMIKHCGGLPLAVKLLGGLLASQYTLHQWKRIYENIRSHIIGGTSYNGDNNN
LVYHVLSLSFEELPSCLKHCFLYLAHFPEDCPVDVEKLAYYWAAERMPKPEYYERTSVRDVVDGYIEELVKRNMVISERD
GMTLRFEKCHLHDTMREVCLIKAKEENFLQIVHGTTSKSSCKSRRLAIHRLDKTFDEEMEINNPKLRSLLVILKDMRTDW
MVPGLRFTGLKLMRVLDLSKAQFDGGELPSSIGNLIHLRYLSLYMAHVTHLPSSMRKLKLLIYLNLCVDARCSLYMPNFL
KKMRELTTLWFPLRIHDKVKMELGNLVNLETLENFSTEHGSVCDIQGMTRLKTLSISFNGKGCTMETLSSSLSELRHLEN
LNIYDAYKLYAPTVDEEGFCFDCKNLKQLKLSICMPRLPDAQRFPSHLRSITLRGCCLEEDPILILEKLLHLYDVSLLNI
SFCGRRMVCSSGGFPQLHKLEFGGLAEWEEWIVEEGSMPFLQTLTIHNCRKLMELPDGLRFVTSLEELDMNTHTLEFWKK
LSIGGEEYYKVQHIPLLNIV* |
Expression(FPKM) | |
Classification(Core/Distributed) | |
Function classfication (GO) | GO:0006952 |
Pfam | NB-ARC domain |
KEGG | POPTRDRAFT_554585; disease resistance family protein; K13457 disease resistance protein RPM1 (A) |
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