Names & Information
Knowledge of BnaA01G0387600ZS:
| Gene Name | BnaA01G0387600ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | disease resistance gene homolog 1A [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1 |
| NT seq | Len:2784 nt ATGTCCTCAGCTACTGTTGATGTTGGGATAGGACTGATTCTCAGCCTCCTAGAAAACGAGACCTTGTTGCTGTCAGGAGT TCACAGCGAGATCGAGAAGATGAAGAAGGAGTTGCTTATCATAAAGTCCTTTCTTGAGGACACCCATAAACAAGATGGGA ATGGATCCACCACCACCACAACAACGGGAACAACAACAACTCAACTCTTTCAAACTTTTGTGGCGAACACAAGAGACTTG GCTTACCAAGTGGAAGACATCATCGACGAGTTCACCTATCACATCCACGGTTATCGAAGCTGCACAAAGCTTCGGCGTGC AGTTCATTTCCCTAAGTACATGTGGGCTAGACACTCCATAGCTCAGAAGCTAGGAGCCGTGAATGTCATGATTCGTTCCA TTTCTGAATCCATGAAAAGGTACCAAACCTATCAAGGAGCATTAGTATCGCATGTTGATGATGGTGGTGGTACAAAGTGG GTGAATCACATCAGCGAGTCATCTTTGTTCTTTAGTGAAAACAGTCTTGTAGGGATTGATGCAGCCAAGGGAAAGCTCAT TGGATGGCTTCTGAGTCCTGAACCTCAGAGGATAGTTGTCTCGGTGGTCGGAATGGGTGGTTCAGGGAAGACTACACTCT CAGCTAACATCTTCAAGTCCCAAACCGTGCGCAAGCATTTCGCGTCATACGCTTGGGTTACTATCTCTAAGTCCTATGTG ATTGAAGATGTGTTTAGGACAATGATAAAGGAGTTCTACAAAGAAGCAGAAACGCAGATTCCAGGTGAGTTGTACTCCTT AACTTACAGAGAGCTGGTTGAGAAGCTTGTGGAGTATTTGCATTCCAAGAGGTACTTTGTTGTGCTCGATGATGTGTGGA ACACTGGTCTGTGGAGGGAGATAAGCATTGCTCTACCAGATGGCATTAGCGGAAGCCGTGTTATGGTCACTACTCGCAGC AATAACGTGGCTTCTTTCTCATATGGCAGTGGGAGTAGAAAGCATGAGATTGAGCTCTTGAAAGAAGACGAGGCTTGGGC GCTTTTCTGCAACAAAGCCTTTTCAGGAAGTCTTGAGGAATGCAGAAGGAGGAATCTAGAGGTGGTAGCAAGGAAGTTAG TTGAGAGATGTCAAGGCCTGCCGTTAGCTATAGCTTCTTTGGGGAGCATGATGTCAACAAAGAGGTTGGAGTCAGAGTGG AAGCAAGTCTACAACTCATTGAACTGGGAACTGAACAACAATCTTGAGCTCAAGGTTGTTAGAAGCATCTTGTTGCTTAG CTTCAGTGATCTGCCGTATCCGCTTAAACGTTGTTTCTTGTACTGTTGTATGTTCCCTGTGAACTACCGGATGAAAAGGA AGAGGCTGGTTAGGATGTGGATGGCGCAACGGTTTGTGGAACCGATCAGAGGAGTGAAAGCGGAGGAAGTGGCTGATGGT TACCTCAATGAGCTTGTTTACAGAAACATGCTTCAAGTTATCTTGTGGAATCCTTTTGGACGTCCCAAAGTGTTCAAGAT GCATGATGTGATCAGGGAGATCGCTCTATCTATATCCAAAGCTGAGAGGTTCTGTGATGTTAATGGTGATGATGATGATG ATGATGATGCGGAAACAGCCGAGGATCACGGTACTCGCCATTTATGCATTCAGAAAGAGATGAGATCAGGTATAGTACGT AGAACAAACCTTCACACTCTTTTGGTTTGCACTAAACACAGCATTGAACTGCCTCCAAGTCTGAAACTTGTAAGAGCCTT AGACCTTGAAGGCTCTGGCGTCACCAAGCTACCTGACTTTTTGGTAACTCTGTTCAACTTAAAGTACTTGAACTTGTCGA AAACCGAAGTGAAGGAACTCCCAAGAGACTTTCATAGACTCATTAATTTGGAGACTTTGAACACTAGGCACTCCAAGGTT GATGAGCTTCCTCCAGGGATGTGGAAGCTGCGGAAGTTGCGTTATCTGATTACTTTCCGTTGCAACTACGGACATGATTC CAACTGGAACTATGTTTTAGGCACAAAGGTTTCTCCGAGTATCTGCCAGCTGAAGGATTTGCAAGTCATGGACTGCTTCA ACGCAGAAGCTGAGCTTATCAAGAAGCTAGGGGGCATGACTCAGCTCACGAGAATAAGCCTTGTCATGATTAAAAGAGAA CATGGAAGTGAGTTATGCGAGTCGCTGAACAAGATCAAAAGACTCAGATTCTTGTCTCTCACGTCCATTCATGAAGAGGA ACCGTTAGAGATAGATGGATTGATAGCAACTGCAAGCATTGAGAAACTCTTTCTAGCAGGGAAACTAGAAAGAGTACCGA GTTGGTTCAGTACTCTTCAGAACGTAACCTATTTGGGTCTGCGCGGATCTCAGCTGCAAGAGAACGCCATTCACTACCTC CAAACCCTTCCTAAACTAGTATGGCTTTCATTTTACAATGCATACATGGGGACTAGGTTGTGTTTTGCTGAAGGGTTTGA GAATCTTAAGATTCTAGATATAGTCCAGATGCGACATCTTACAGAAGTTGTGATAGAAGATGGTGCAATGGTTGGGATAC AGAAGCTTTATGTCAGAGCTTGTAGAGTGTTGGAGTCGGTCCCGAGGGGAATAGAGAATCTTGTGAACCTTCAAGAACTG CATTTGAGTCATGTTTCTGATCAGCTAGTGGAGAGGATTCGTGGGGAAGAGGGTGTAGACCGGTGGAGTGTTAAACACAT TCCTGCCATCAAGCATCATTTCAGAACTGAGGATGGCTCTTTCTATGTGAGCCTCTCATCTTGA |
| AA seq | Len:928 aa MSSATVDVGIGLILSLLENETLLLSGVHSEIEKMKKELLIIKSFLEDTHKQDGNGSTTTTTTGTTTTQLFQTFVANTRDL AYQVEDIIDEFTYHIHGYRSCTKLRRAVHFPKYMWARHSIAQKLGAVNVMIRSISESMKRYQTYQGALVSHVDDGGGTKW VNHISESSLFFSENSLVGIDAAKGKLIGWLLSPEPQRIVVSVVGMGGSGKTTLSANIFKSQTVRKHFASYAWVTISKSYV IEDVFRTMIKEFYKEAETQIPGELYSLTYRELVEKLVEYLHSKRYFVVLDDVWNTGLWREISIALPDGISGSRVMVTTRS NNVASFSYGSGSRKHEIELLKEDEAWALFCNKAFSGSLEECRRRNLEVVARKLVERCQGLPLAIASLGSMMSTKRLESEW KQVYNSLNWELNNNLELKVVRSILLLSFSDLPYPLKRCFLYCCMFPVNYRMKRKRLVRMWMAQRFVEPIRGVKAEEVADG YLNELVYRNMLQVILWNPFGRPKVFKMHDVIREIALSISKAERFCDVNGDDDDDDDAETAEDHGTRHLCIQKEMRSGIVR RTNLHTLLVCTKHSIELPPSLKLVRALDLEGSGVTKLPDFLVTLFNLKYLNLSKTEVKELPRDFHRLINLETLNTRHSKV DELPPGMWKLRKLRYLITFRCNYGHDSNWNYVLGTKVSPSICQLKDLQVMDCFNAEAELIKKLGGMTQLTRISLVMIKRE HGSELCESLNKIKRLRFLSLTSIHEEEPLEIDGLIATASIEKLFLAGKLERVPSWFSTLQNVTYLGLRGSQLQENAIHYL QTLPKLVWLSFYNAYMGTRLCFAEGFENLKILDIVQMRHLTEVVIEDGAMVGIQKLYVRACRVLESVPRGIENLVNLQEL HLSHVSDQLVERIRGEEGVDRWSVKHIPAIKHHFRTEDGSFYVSLSS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | RPM1; disease resistance protein RPM1-like; K13457 disease resistance protein RPM1 (A) |