Names & Information
Knowledge of BnaA02G0070200NO:
| Gene Name | BnaA02G0070200NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 isoform X1 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:3888 nt ATGATGGAATCATACAAGCTTGGAAACAGAGTCATGGCTTCTCTTCCTTGTCATTCTCCTTCAGCCTCAGCCATCTGGAA AACGGACGTTTTCGTGAGTTTTAGAGGCGAAGACGTGCGCAAAACATTCGTGAGCCATCTGTTCTGCGAGCTCGATCGGA TGGGGATCAACGCGTTCAGAGACGACTTGGATCTCGAGAGAGGCAAGCATATCTCCTCAGAGCTTGTGGATACGATCAGA GGCTCCAGGTTCGCGGTCGTCGTGGTCTCTAGGAACTACGCATCTTCGAGCTGGTGCTTGGACGAGCTCTTGGAGATCAT GGAACGTAAGAACACGGTTGATCAGAAGACAATCATACCCGTGTTCTACGAGGTTGATCCTTCTGATGTGAGAAGACAGA CTGGGAGTTTCGGTGAGGGTGTTGAGAGTCATAGCGACAAGAAGAAGGTGATGAAATGGAGAGAAGCTTTGACGCAGTTA GCTGCTATATCTGGTGAAGATTCTCGGAACTGGAGGGATGAGTCGAAGCTAATTAAGAAGATTGTTAAAGACATATCTGA TAGATTGGTTTCCACTTCACTGGATGATACAGATGAGTTGATTGGAATGAGTTCTCATATGGACTTTCTGCAGTCTATGA TGTCTATAGAGGAGGAAGATGTTCGCACGGTAGGGATTTGGGGAATGGGTGGAGTTGGGAAAACTACTATTGCTAAATAC TTATACAACAAGCTCTCATCTCGGTTTCAAGCTCATTGCTTCATGGAGAATGTGAAGGAAGTGTGTAACAGATATGGAGT TGAGCGTCTACAGGGAGAGTTCTTATGCAGAATGTTTCGAGAGAGAGACTCGGTTTCTTGTTCGAGCATGATAAAGGAAA GGTTCAGGCGTAAAAGGGTTTTGATTGTACTTGATGATGTAGATAGATCTGAGCAGGTGGATGGATTGTTTAAGGAGACT GGTTGGTTTGGTCCTGGAAGCAGAATCATTGTTACAACGAGAGATAGACATTTGCTAGTTTCTCATGGCATAGAACTGAT ATATAAAGTTAAGTGTCTACCCGAAAAAGAAGCTTTACATCTCTTTTGCAACTATGCTTTCAGAAACGAGACTATAGCTC CAGAGTTTAGGGTGTTAGCAGTTCAAGCTGTAAACTATGCTTCTGGTCTTCCACTGGCTTTGAGAGTTTTAGGTTCTTTC CTTTATCGAAGAGGCGAAAGAGAATGGGAAAGCACACTCGCTAGGCTTGAAACTTCTCCTCATAGTGATATCATGGAGGT TCTGAGAGTTAGCTACGATGGATTGGATGAGCAGGAGAAGGCTATTTTTCTCTACATATCATGTTTCTACAACATGAAGC ATGTTGATTACGCCACAAGACTTCTTGATATCTGTGGCTATGCCGCTGAAATTGGTATCACGGTTCTCACTGAGAAGTCT TTGATAGTCATATCAAATGGATGCATAAAGATGCATGATTTGGTTGAACAGATGGGTAGAGAACTTGTACGCCGACAAGC TGAACGGTTTCTTTTATGGAGACCTGAAGACATCTGTGATCTGCTGTCAGAAACTACTGGAACAAGTGTTGTTGAAGGAA TGTCACTTAACATGTCTGAAGTATCTGAGGTATTGGCTAGTGATCAAGGTTTTGAGGGATTGTCTAATCTCAAGCTTCTC AACTTCTATGATCTTTCATATGATGGAGAGACTAGAGTGCATCTACCTAATGGCCTCACTTATCTACCGCGCAAGCTTCG TTATCTACGCTGGGATGGATACCCTTTAAACTCTTTGCCTTCAAGGTTTCATCCGGAGTTTCTTGTTGAACTTTGTATGA GTAATAGCCATCTCCACTATCTTTGGAATGGAATCCAGCCTCTTAGGAAACTGAAGAAGATGGATCTTTCTCGTTGTAAA TACCTAATCGAAATTCCGGATCTCTCAAAAGCCACAAACCTTGAGGAACTCAACCTTTCCTATTGCCAAAGCTTAACTGA GGTTACTCCATCTATCAAAAACCTCCAGAAACTTTATTGTTTCTACTTGACTAACTGCACTAAACTCAAGAAGATACCAA GTGGAATCGCTTTGAAGTCGCTTGAAACAGTTGGAATGAACGGATGCTCAAGCCTAATGCATTTTCCAGAGTTTTCTTGG AATGCCAGAAGACTCTACCTGAGCAGTACAAAGATAGAGGAACTGCCATCATCGATGATCAGCCGTCTCTCTTGTCTGGT TGAGTTGGATATGTCAGATTGCCAGAGTATCAGGACTCTTCCGAGTTCTGTAAAGCACTTGGTGTCACTTAAATCACTGA GTTTGAACGGTTGCAAACATCTTGAGAACCTCCCGGACTCATTACTGAGCCTCACATGTCTTGAAACGCTTGAAGTGTCT GGTTGCCTTAACATCAACGAGTTCCCTCGCCTTGCCAAGAACATAGAAGTTCTGCGTATATCTGAGACATCGATTAATGA AGTTCCTGCAAGAATCTGTGATCTCTCTCAGCTTAGGTCCTTGGATATTTCAGGAAATGAAAAACTTAAATCACTTCCGG TAAGCATTTCTGAGTTAAGATCACTTGAAAAGCTCAAGCTCTCTGGCTGTTGTGTACTTGAGAGCCTTCCGCCAGAGATT TGTCAGACAATGAGCTGCTTGAGGTGGCTTGATTTGGAAAGGACCAGCATCAAAGAACTGCCTGAAAACATTGGTAATTT GATAGCTCTCGAGGTGCTTCAAGCTGGAAGAACAGCGATAAGACGAGCACCATTGTCTATTGCAAGACTTGAACGTCTGC AAGTTTTAGCAATCGGGAATAGCTTCTATACCTCACAAGGTCTGCATTCTCTATGTCCTCACTTATCAATATTTAATGAC TTGAGAGCGCTGTGCCTAAGCAACATGAACATGATAGAGATCCCAAACAGTATTGGTAACTTGTGGAGTCTATCAGAACT AGATTTGAGTGGTAACAACTTTGAACACATCCCCGCGAGCATCAGACGACTCACCAGGCTGAGCAGACTGGATGTTAACA ATTGTCAGAGACTTCAAGCACTGCCTGATGACCTTCCACGGCGTCTCTTGTATATCTACGCCCATGGCTGCACATCACTA GTGAGTATCTCAGGCTGCTTCAAGCCTTGTTGTCTGCGCAAGCTTGTAGCGAGCAACTGTTACAAACTGGATCAAGAGGC ACAGATTCTCATCCACCGTAACATGAAGCTAGATGCAGCAAAACCAGAACACTCTTATTTTCCTGGAAGAGATGTGCCAT CTTGTTTCAATCACCAAGCCATGGGATCTTCCTTGAGAATACGTCAACCATCATCTGACATTCTGGGATTTTCCGCATGC ATCATGATTGGAGTTGATGGAGAGTACTCAATGAACGATCTCAAGATACGTTGCTCTTGTATCTTAAAAAGGGTTGATGA TGCTCAAGAGCTGGTTGTTATGGATGAGCTATGGTATCCTGATCCAAAAGCTTTCGCAAACATGAGTTTTGGATCAGATC ATCTTCTGTTGTTCAGCAGAAGTTGCATGTCCATGGGAGCTTACAACGAAGTCTTCTTTGAATTTTCGATCGAAAACACA AACGGAGATTCTTCTACTAACCTGCTGGTAGAGGTTAAAAAGTGTGCAGTGCACCTCATAACGTTTAAAGACATGTTACA AGAGGAGCATGAAAGCTCATCCTCCTCACAACAGTTCTCTAATGACGACAATGAGAACATTCATGATCCTGATTTGGAAG AATTAGATGAAGCAGGGGTTCCGAAAAGAAGACCTGATGACTTGCATAAGGAGCAACCAAATCCAAAGAAGATCAAGTTT CTTCCTGTTCCTTCAAAATTACATCAACTGATTGATACACCACAGTGA |
| AA seq | Len:1296 aa MMESYKLGNRVMASLPCHSPSASAIWKTDVFVSFRGEDVRKTFVSHLFCELDRMGINAFRDDLDLERGKHISSELVDTIR GSRFAVVVVSRNYASSSWCLDELLEIMERKNTVDQKTIIPVFYEVDPSDVRRQTGSFGEGVESHSDKKKVMKWREALTQL AAISGEDSRNWRDESKLIKKIVKDISDRLVSTSLDDTDELIGMSSHMDFLQSMMSIEEEDVRTVGIWGMGGVGKTTIAKY LYNKLSSRFQAHCFMENVKEVCNRYGVERLQGEFLCRMFRERDSVSCSSMIKERFRRKRVLIVLDDVDRSEQVDGLFKET GWFGPGSRIIVTTRDRHLLVSHGIELIYKVKCLPEKEALHLFCNYAFRNETIAPEFRVLAVQAVNYASGLPLALRVLGSF LYRRGEREWESTLARLETSPHSDIMEVLRVSYDGLDEQEKAIFLYISCFYNMKHVDYATRLLDICGYAAEIGITVLTEKS LIVISNGCIKMHDLVEQMGRELVRRQAERFLLWRPEDICDLLSETTGTSVVEGMSLNMSEVSEVLASDQGFEGLSNLKLL NFYDLSYDGETRVHLPNGLTYLPRKLRYLRWDGYPLNSLPSRFHPEFLVELCMSNSHLHYLWNGIQPLRKLKKMDLSRCK YLIEIPDLSKATNLEELNLSYCQSLTEVTPSIKNLQKLYCFYLTNCTKLKKIPSGIALKSLETVGMNGCSSLMHFPEFSW NARRLYLSSTKIEELPSSMISRLSCLVELDMSDCQSIRTLPSSVKHLVSLKSLSLNGCKHLENLPDSLLSLTCLETLEVS GCLNINEFPRLAKNIEVLRISETSINEVPARICDLSQLRSLDISGNEKLKSLPVSISELRSLEKLKLSGCCVLESLPPEI CQTMSCLRWLDLERTSIKELPENIGNLIALEVLQAGRTAIRRAPLSIARLERLQVLAIGNSFYTSQGLHSLCPHLSIFND LRALCLSNMNMIEIPNSIGNLWSLSELDLSGNNFEHIPASIRRLTRLSRLDVNNCQRLQALPDDLPRRLLYIYAHGCTSL VSISGCFKPCCLRKLVASNCYKLDQEAQILIHRNMKLDAAKPEHSYFPGRDVPSCFNHQAMGSSLRIRQPSSDILGFSAC IMIGVDGEYSMNDLKIRCSCILKRVDDAQELVVMDELWYPDPKAFANMSFGSDHLLLFSRSCMSMGAYNEVFFEFSIENT NGDSSTNLLVEVKKCAVHLITFKDMLQEEHESSSSSQQFSNDDNENIHDPDLEELDEAGVPKRRPDDLHKEQPNPKKIKF LPVPSKLHQLIDTPQ* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A) |