Names & Information
Knowledge of BnaA02G0275300GG:
| Gene Name | BnaA02G0275300GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
| NT seq | Len:3942 nt ATGGCCAAAACAGACCACCAAGTGTTCATTAGTTTCAGAGGAGCAGACGTGCGAAAAAACTTCCTAAGCTTCCTTACAGA CGGGCTAAAAAGGGCATGCGTAAATTACTATGTCGACACTAAAGAGACGAAAGGTGAAGTTCTTGACATCCTTCTTCAAA GGATCCAAGAGTCGCGGCTCGTGCTGATCATCTTGTCCGAAAACTACATGCAGTCGAATTGGTGCATCAAAGAGCTGCGC ACGACGACTAAGGATATAAAAGTGTCAAGAAGGAAGGTCATCCCGATCTTCTATAATGTCCAAGTCGCAGATGTGAAGGA CAAATGGAAAGTTGGCGAACAAGCAGAAGGAGTAGAAGGAGAAGAGACAGTGGAAGAGAGGGAGAAAAACGTGAAGGAAG CTTTGATGATTCTTACGAGGCATATGGGTATGAGATCTGATGAGTACGGTACTGACTGTGAATTCATAGAACATATCGTC AAGGAAGTAAAGAAAGTGTTAACCAGTATCGAACAAGAGGAGAAGGTGAAGGCTTCCGTCAATACTACGGTGAGATCTGA AGGAGAGAAGCAGGAAGTGTCTTCGCTCACGGGGACAAACTTGCCAGGAGAAGGAGAAGAGCTTGAGACAAAGGAAAATG TTAAGTTCTTTGGGATCACGCAACGTCTACAAAAGCTACAAGAGAAGTTAGGTATGCATGGAGTGGTTTCCAAGGAAACT CGTATTATTGGAGTTCTTGGGATGGCTGGTATTGGTAAAACCACAATCGCACACAAGTTGTTTGAGGAGGGAAAAAACAA GTTTCATCAAAGAATGTTTTTCGATGATATTGATAAAACCTCAAAGGAAGAAGGGCTTACTGAATTGCGGGTTAGACTCC TGAGAAAGCTTTTGAAGAAGACAGATAAGACGATAACCGAAGAGACCACACATGAATCCGTGGAGACGGAGCTACTTGAT AGCAATGTTTTTCTTGTCCTGGATAACGTAAGCAACAAGAAACAACTAGAGTATCTTCTCGGAAACAGAAGGTGGATTAG CCAAGGCAGCAAGGTTGTTATTGTGACAAGCGATAAATCATTGGTCGAGGATGTTGTCAGTGATACTTACGTTGTCCCAG GATTGAACGAGAAGGAAGGGTTAGAGTGTTTTTGTTATCATGCCTTTGGTGACCACAAAGTCCATGAAGGAAGTTTGATG AAGCAATCAAGAGAGTTTGTGGATTACGCTAGAGGAAACCCATTAGCTCTCAAGGTACTTGGACCGGAGCTTCGTGGTAG AGACAAGGCTCACTGGGAATCCAAGCTACTTCAACTCGCACAAAGTCCAAGCAATGTGTTGAATGTGAGTTACGATGGTC TTAGCCAGCAACAAAAGGAAGCATTTCTTGATGTCACTTGTTTCTTCAGATCAGAAAATCACAAGTTTGTGACAGCTTTG GTCGATTCTGAGCCTGACAAGGGTAGTAGCGAGATCAGAGATCTTGCGGACAAGTTCCTGATAGATATCACTGGTGGCCG AGTAGAGATGCATAATTTACTGTACACACTGGGGAAGAAACTAGCTTCCAAACAACAAAAGAGGCTATGTAACCATCATG AAATTATCCGAGCGTTAAAGAAAAAAACGGGGAAAAGCACTATCAATGGTATCAGAGGTATGTTTTTGGACATGTCTGAA GTAGGCACTGACACAGCATTAAGCAAAGAGGCTTTTAATGGGATGGACAATCTTCGATATCTCAAAATCTATGACTCTCA GTTTCCTCAAGAAAATGAAGCTGGCTACAAACTACACTTCTCCAATGGAGTTAAGTTACCGTTACAAAAGATCAGGTATC TCCACTGGCTGAGATTCCCAGGGGAAGAACTTCCTCAAGACTTCAACCCTAAAAATCTTATTGACCTCAAGCTGCCTTAT AGCAAGATTAAACGGCTTTGGGATGGTGTTAAGGATACATCAAAATTAACATGGGTCGATCTCAGCCACTCAGTCAACCT TAGCGACTTGTCGGGCTTATTAGGATCCCAAAATCTTGGAAGACTGAACCTGGAAGGCTGCAAAGAGTTGAAAACATTAG ACGCAAGGATGGAGAGCTTGACAAGCCTTGTTTTCCTGAATCTGAGGGGCTGCTCAAGTCTTGTATCACTCACAGAGATG AATATGGAGTCTCTTAAAACACTCATCCTCAGTGACTGCTCGAATCTCGAGGAGTTTCAGATAATATCAGAACAACTAGA AGCATTATACTTAGATGGAACATCCATAAAGACACTTCCTCCATCTATGATCAAGCTCCAGAAACTAGTCTTGTTGAACC TCAAGGACTGCACAAAGCTAGCGACCGTGCCCGGCTGTCTTGGTAATATGAAAGCTCTTCAAGAAGTAATACTCTCAGGT TGTAAAAAGATGGAGACCTTTCCTGATCTGCAAGAGAACATGAGACGGCTGCGAATATTTCTGCTTGATGGAACATCGAT AAAAGAGGTGCCAAAGCTATTGCAAAACCCTGGCCTCTCAAGATGGCCACACCATGGTGGTGTCAAAGGCTTCCCCTTGT TGAGACACCTCAGCTTAAGAGGAAACGATAAGATCCAAAGCCTGCAACCTGACATTGGTGACCTGTACCATCTAAAATAT ATTGACTTGAAGTTCTGCAAGAACCTTGCATCTGTTCCGACGCTCCCACCAAACCTTCAATGCTTAAATGCACATGGCTG TGAGTCACTGACAACATTGGGAAACCCACTTGCCCATCTTGTTCTGACAGATCAAATCCATGCCACACTCATTTTCTCAA ACTGCAACAAACTTGATGAAGATGCAAAAACTGGTATCGTTTCATACATTCAGAAGAAGAGCCAGTTGATGTCAGATGCA ATTGATCGCTACAATTTGGGCTCCGTTGTGGAACCTTTTGTTGGAGCTTGCTTTCCTGGATGTGAAGTACATGCATCGTT AAGTCACCAAGCCTACGGATCAGTGATAGTACTACCAGAACTGTCGCGACACTGGAGTAACAATGGGACCACTGGTGTAG TTCTATGTGCAGTTGTCTCCTTTACAGATTACCAAGACCAAAACAATCATGTCCTAGTGAAATGCACCTGTGAGTTCAAG ACTTCAGATGGGTCTTTGAGGCAGTTTAGTTGCATGGTAGGAGGAAATCGGCCGCGGACGATCAACTCAGACCACGTATT TGTTGGATACACGAGCTGGTTGCAGATCAAGAAACAAAAGGAAGCAGATGATGATGATGATAAGAAGGATTATAGTTGTA GTGATGATGATCAGGCTTCTCTTAGATTTGAAGTGATAGATAGTACAAGAGAGCTGGTGAAAAATTGTCAGGTGATAAAG TGTGGTTTCAGTTTGGTCAATGAATCTGATGAAGCTGAAAGTTTTTCTTGGGAGGTCAACAGGATCCATGGTGAAGCTTC AGAGATGGAAGTGATCAATCAACAAGGAGAAACAAGCACAGTGAGTAATAACAGCACCCAGGGTGTATTAGCAAGCAGAA TAATTGATAATGAAGAAGCTTTGAGGAGCCAACAAAGAGAAACAACATCCATAGGTACTAACAATAACGATACCAATGAT GTGTTGATGTTGTTACAAGCGTATTCAGACGATAGCGAAGTAACTGATGGTGATGAATCTCAAAGGATGGAAGAGATCAA CCAACAAGGAGACACAATCTCAATAGGTGATGTATCAATGGTGTCTCAGGATTCAGAAGAAAGTGACGAATCAGAGATTA ATGAACAAGATGAGACAAACTCTTGCGTATCTTCAGAGGATCAAGGGAATAGCTATGTGCAGGAATGTGGTAGAGTAACA GAAAACACAAGTGCGCAGATGATAAAACCTGTTGGGCTTCTTTGTCTTATGATCTCCATTTCTGCTGGAGCTGCTTTCAT CCTGGGAAAGAGAAAGAGATGA |
| AA seq | Len:1314 aa MAKTDHQVFISFRGADVRKNFLSFLTDGLKRACVNYYVDTKETKGEVLDILLQRIQESRLVLIILSENYMQSNWCIKELR TTTKDIKVSRRKVIPIFYNVQVADVKDKWKVGEQAEGVEGEETVEEREKNVKEALMILTRHMGMRSDEYGTDCEFIEHIV KEVKKVLTSIEQEEKVKASVNTTVRSEGEKQEVSSLTGTNLPGEGEELETKENVKFFGITQRLQKLQEKLGMHGVVSKET RIIGVLGMAGIGKTTIAHKLFEEGKNKFHQRMFFDDIDKTSKEEGLTELRVRLLRKLLKKTDKTITEETTHESVETELLD SNVFLVLDNVSNKKQLEYLLGNRRWISQGSKVVIVTSDKSLVEDVVSDTYVVPGLNEKEGLECFCYHAFGDHKVHEGSLM KQSREFVDYARGNPLALKVLGPELRGRDKAHWESKLLQLAQSPSNVLNVSYDGLSQQQKEAFLDVTCFFRSENHKFVTAL VDSEPDKGSSEIRDLADKFLIDITGGRVEMHNLLYTLGKKLASKQQKRLCNHHEIIRALKKKTGKSTINGIRGMFLDMSE VGTDTALSKEAFNGMDNLRYLKIYDSQFPQENEAGYKLHFSNGVKLPLQKIRYLHWLRFPGEELPQDFNPKNLIDLKLPY SKIKRLWDGVKDTSKLTWVDLSHSVNLSDLSGLLGSQNLGRLNLEGCKELKTLDARMESLTSLVFLNLRGCSSLVSLTEM NMESLKTLILSDCSNLEEFQIISEQLEALYLDGTSIKTLPPSMIKLQKLVLLNLKDCTKLATVPGCLGNMKALQEVILSG CKKMETFPDLQENMRRLRIFLLDGTSIKEVPKLLQNPGLSRWPHHGGVKGFPLLRHLSLRGNDKIQSLQPDIGDLYHLKY IDLKFCKNLASVPTLPPNLQCLNAHGCESLTTLGNPLAHLVLTDQIHATLIFSNCNKLDEDAKTGIVSYIQKKSQLMSDA IDRYNLGSVVEPFVGACFPGCEVHASLSHQAYGSVIVLPELSRHWSNNGTTGVVLCAVVSFTDYQDQNNHVLVKCTCEFK TSDGSLRQFSCMVGGNRPRTINSDHVFVGYTSWLQIKKQKEADDDDDKKDYSCSDDDQASLRFEVIDSTRELVKNCQVIK CGFSLVNESDEAESFSWEVNRIHGEASEMEVINQQGETSTVSNNSTQGVLASRIIDNEEALRSQQRETTSIGTNNNDTND VLMLLQAYSDDSEVTDGDESQRMEEINQQGDTISIGDVSMVSQDSEESDESEINEQDETNSCVSSEDQGNSYVQECGRVT ENTSAQMIKPVGLLCLMISISAGAAFILGKRKR* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like; K16226 disease resistance protein RPS4 (A) |