Names & Information
Knowledge of BnaA02G0275600GG:
| Gene Name | BnaA02G0275600GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA02g23810D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=2 SV=1 |
| NT seq | Len:3030 nt ATGGCGGCTTCTTCCACGGCACTTCCGCAACCTCAGATCTTCATTAATTTCCGGGGGAAGGATTTACGCTGTGGATTCGT CAGCCATCTCGTCCGTGCCTTCAAAAGGAAGAAGATCAATGTATTTATCGATGAAAGGGAGGATAGAGGCCAACCTTTAG ATTCTCTTTTTAAAAGGATAGAGGGGTCCACAATCGCCCTTGCTGTATTCTCCGAAAACTATCCCGAATCAAGATGGTGC TTACAAGAGTTGGAGAAGATGAATGAGCGTATGGTGGAAGGCAACCTAGTGGTGATTCCCATCTTTTACAAGGTGGAGCC ATCCACAGTGAGATACTTGAAGGGAAATTTTGGGGATAAGTTATGGATTATGGCCAAGGGTGATGAGAAGATTAAGAAGT GGGAGGAAGCCTTGAGATCGATTCCTAATCTATTCGGCATCACTGTGGACGATAGAAGCGACGAGGGCCAAGCAGTCAAT GAAGTTGTGAAGGCGGTTAAGTCAGTCCTGTTCAAAGTTTCGCTGATTGGGAGCCAAGGTGTTTCTATTCAACCTTCAAT TAACAGTGACGCGGGAACTTCCTCTGGAGGAGACAAGCACAAGGCTTTTGGAGTGAAACTACGGCTGAAAGAGTTGGAAG ATATGTTGGGTTGTGATAAATACAAAGGAACTCGTATCATTGGAGTTGTTGGGATGCCTGGGATAGGTAAAACCACACTC ATGAAAGCGCTCTTAGAGAAGTTGCAGTTTAAGTTTATGAAGCACGCTCTAGTTGAGAATATCCGTGCAAAATCAGAGGA CCCTGGGTTAGATTACTTACCCACATTGCTTTTGGAAGACTTACTGGGGGTGGAAGATCCTTTCACAGACAATGTTGAGG ACCCGTACGAAACGTACAAGCCTCAATTGCTTAGACGCAAGGTTCTTGTTATTCTGGATGGTGTTAGTCAAAAGGAACAG ATAGATGCTCTTCTCAGGAAAGGTGACTGGATTAGTGAAGGAAGCAGGATTGTCATTGCAACAAGTGACATATCCTTGAT AAATGGTCTGGTTCACGATACTTACATGGTCCAGAATCTGGACCACAGGGACAGCTTAGAGCTCTTTAACTACCATGCCT TTGGTGACGCTCAAGCCAATCCTCCCAATTACACAAAGCTGAGAGAGGAGGCTTTACATTACGCCAGAGGACATCCACTT GCTCTCAAAATGTTGGGTAGAGAGCTTAAGAATCAAAGTATGGCTCAGTGGAAATCGAGTCTGGAGAAACTCGCCCAGAG TCCAATCCCTGATATTGGAAGTGTCTTCCAAATGAGTTATGATGAACTGAGTTCAGAGCAGAAGGATGCGTTTCTTGACA TAGCTTGTTTTAGATCGGAGAATGTGGATTATGTAGAAAGTTTACTGGCTTCACCTGACCCCGGATCTGCTGAAGCAATG AGTGCAGTAAAAGCTCTCACGCATAAGTTCTTGATTAATACTTGTGACAGTCGAGTGGAGATGCATGATCTACTGTATAC TTTTTCAAGAGACCTCGATTCCAAAGCATCCACTCAATATGGTAACAGAAAACGGAGGCTGTGTCTCCATCAAGACATAA TCAAGGACGGTGTAATCAATGCGCAAAATAAGATGCAAGCTGCCAATGTCCGAGGTATTTTCCTAGACTTGTCTGAAGTG AAAGGTGAAACGATCTTAGACTGCGACCACTTCATAAGGATGGTTAATCTCCGGTATCTCAAGTTCTACAATTCTCAGTG TCCGCAGGAATGTAAAACCAACAATAAGATCAATATTCCTGATAAACTTAAGCTACCACTGAAAGAGGTTAGATGCCTCC ACTGGCTGAAATTCCCACTGGAGGAACTTCCAAATGATTTCAACCCGGTGAATCTTGTTGACCTTAAGCTGCCCTTCAGC GAGATTCGACAACTTTGGAAGGGTGACAAGGATACACCTTTCTTAAAGTGGGTTGATCTCAGTCACTCAAGTAAATTGTG CAGCTTGTCAGGGTTATTAAAGGCTATAGATCTTCAAAGATTGGACCTTGAAGGCTGCACAGCATTAAAAACTTTGCCAG GTGGTATGAGAAAGATGAAAAAGCTTGCTTTCCTGAATCTGAAAGGTTGCACAAGTCTCGAATCTATTCCAGAGATGAGT TTAATTTCTCTGAAAACTCTTACTCTCAGTGGCTGCTTGAATTTTAAGGAATTTCCGTTGGTTTCAGAAAATCTTGAAAT TCTATACTTGGATGGTACAGCAATAAGTCAGCTTCCTGAGAATATGGAGAAGCTACAGAGACTTGTTGTATTGAATATGA AAAGTTGCAAAATGCTTCAGAAAGTCCCAGTCCGGGTTGGTGAGCTGAAAGCTCTTCAGGAACTGATACTCTCTGATTGT TTAAATCTCAATTATTTTCCAGAAATCAGGATGAGCTCTTTAAACATTTTACTTTTGGATGGGACAGCCATTGAAGTGAT GCCACAATTACCCTCAGTGCAGTACTTGTGCTTAAGCAGAAATGACAAGATCACATGTCTTCCTACTGGCATCAGTCAAC TTGTTCAACTAAAGTGGTTGGATTTGAAGTACTGTAAGAGTCTTACATCTGTTCCAGAGTTTCCACCAAATCTTCAGTGC TTAGATGCACACGGTTGTAGTTCGCTGAAGACAGTTTCGAAGCCTCTGGCCCGTATCATGCGAACCGAGCAGAACCCTTC CACATTCATTTTTACCAACTGTAAGAACCTGGAACAATCTGCCAAGGAGGAAATCACATCGTATGCCCAAAGGAAATGTC AGCTGCTGTCATATGCTCGTAAACGCTACAATGGGGTCTCTCTCTATATCTCTTTTTTACTCTTTGTATCGCTCTTTAAG ATTCTTGTATCTCAAGAAACTCTGCAGTCTTATGTTTTTCCTTGTTTATATATTTGCAGGGTCTTGTTTCAGAGGCTTTG TTCAGCACTTGCTTTCCTGGATGTGAAGTGCCTTCATGGTTTTGTCATGAAAGAGTTGGATCAGAGCTAG |
| AA seq | Len:1010 aa MAASSTALPQPQIFINFRGKDLRCGFVSHLVRAFKRKKINVFIDEREDRGQPLDSLFKRIEGSTIALAVFSENYPESRWC LQELEKMNERMVEGNLVVIPIFYKVEPSTVRYLKGNFGDKLWIMAKGDEKIKKWEEALRSIPNLFGITVDDRSDEGQAVN EVVKAVKSVLFKVSLIGSQGVSIQPSINSDAGTSSGGDKHKAFGVKLRLKELEDMLGCDKYKGTRIIGVVGMPGIGKTTL MKALLEKLQFKFMKHALVENIRAKSEDPGLDYLPTLLLEDLLGVEDPFTDNVEDPYETYKPQLLRRKVLVILDGVSQKEQ IDALLRKGDWISEGSRIVIATSDISLINGLVHDTYMVQNLDHRDSLELFNYHAFGDAQANPPNYTKLREEALHYARGHPL ALKMLGRELKNQSMAQWKSSLEKLAQSPIPDIGSVFQMSYDELSSEQKDAFLDIACFRSENVDYVESLLASPDPGSAEAM SAVKALTHKFLINTCDSRVEMHDLLYTFSRDLDSKASTQYGNRKRRLCLHQDIIKDGVINAQNKMQAANVRGIFLDLSEV KGETILDCDHFIRMVNLRYLKFYNSQCPQECKTNNKINIPDKLKLPLKEVRCLHWLKFPLEELPNDFNPVNLVDLKLPFS EIRQLWKGDKDTPFLKWVDLSHSSKLCSLSGLLKAIDLQRLDLEGCTALKTLPGGMRKMKKLAFLNLKGCTSLESIPEMS LISLKTLTLSGCLNFKEFPLVSENLEILYLDGTAISQLPENMEKLQRLVVLNMKSCKMLQKVPVRVGELKALQELILSDC LNLNYFPEIRMSSLNILLLDGTAIEVMPQLPSVQYLCLSRNDKITCLPTGISQLVQLKWLDLKYCKSLTSVPEFPPNLQC LDAHGCSSLKTVSKPLARIMRTEQNPSTFIFTNCKNLEQSAKEEITSYAQRKCQLLSYARKRYNGVSLYISFLLFVSLFK ILVSQETLQSYVFPCLYICRVLFQRLCSALAFLDVKCLHGFVMKELDQS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |