Names & Information
Knowledge of BnaA02G0282800GG:
| Gene Name | BnaA02G0282800GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: protein VARIATION IN COMPOUND TRIGGERED ROOT growth response-like [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein RPS6 OS=Arabidopsis thaliana GN=RPS6 PE=1 SV=1 |
| NT seq | Len:3996 nt ATGCTTGGTATATGGGGTTCCTCTGGAATTGGTAAGACTACCATCGCAAGAGCTCTGCTGAACCGATTTTCTTCAAGGTT TCAACGAAGCATCTTTATAGACATGGCTTTCGTATCTAAGAGTAAGAACTTGTATCCTAGTGCAAATGCGGACGACTACA ACCTGAAGTCACATTTACGGAAAGAATTTCTATCCGAGATTTTGGGCGAAAAGGACACTAAGAAAGAGCATGTGGGTGCA CTGGAAGAGAGGCTAAAAAACCGAAAAGTTCTTATCATTATTGATGATTTGGATGATCCAATGGTGCTAGATGCCTTGGT TGGTCAAAATCATAGGTTTGGACGTAGGAGCAGAATCATCATGGTCACAAAAGATAAGCATCTCTTAAGGGCACGCAAGG TTGATTGTATTTACGAGGTTGTTCTCCCATCTAAAGACCTTTCTCTTAAGATGTTATGTCGATATGCTTTCTGTAAAGAT TCTCCACCTGATGGTTTGATGGAACTTGCTTCTGAAGTTGCACTGCTTGCCGGTAATCTTCCTCTGGGTCTTAAAGTTTT AGGTTCCCATTTACAAGGTAGGAATAAAGAGGACTGTATTGATATGTTATTGAGGCTCCGAAGTGGCTTGGATGGACGAA TTGGGAAAACAATGAGAGTCAGCTACGATGGGTTAAATAACAGAAAAGATAAAGCAATATTTCGTCATATTGCATGCTTT TTCAACGGTGCACATATCAATGACATCAAAGAGCTCCTAGCAAATAGTGACTTCGATATCAATATCGGGCTAGTCAACCT CATCGATAAGTCCCTGATACAGGTAAGATCGGGTAATGTAGAGATGCACTGTTTGCTACAAGAGATGGGTAAGGAAATTG TCCGTGAAGAGTCCAATGATCCTGGAGAACGAGAATTCCTTGTGGATTCAAAAGAGATTTGCTATGTGCTTAGTAACACC ACTGGTACGAAGAAGATTTTAGGTATATCACTCGATACCAATGAGATTGATGAGTTGAATGTACACGAGAAAGCCTTTGA AAGTTTGCATAATCTCGTTTTTCTAAACATTTACACGAAGAAAAGAATGATGGAGGAAGAAGAGAGATTGCATTTACCAG AAGGCTTCAACAATTTTTCCTCCAAACTCAGATTATTGTGCTGGGACAGATACCCAATAAGTTACATGCCTTCCAACTTC CGCCCAGAAAACCTCGTTAAGCTCCAAATGCAGAGGAGCAAACTTGAGAAGTTGTGGAAAGGAGTTTGTGAACTTAAAGG ACTCAAGATTATGGACTTGGGGGGATCCAGAAATCTTATGGAAATTCCAAATCTTTCTAAGGCCACTAATCTTCAGATAC TTCGTCTCAACAACTGCTCGAGTTTGGTGGAGCTTCCCTCCACTATCCAGTATCTCAATAATCTGGAGGAGTTGAACATG CAGTTTTGCGAAAACCTAGAGATTCTTCCAAAAGGTGTCAATCTTGAATCTCTAGATCACCTTGATCTTAGTGGATGCTC ACGGTTGAAGAGTTTCCCTGCTATCTCAACCAACATCTCATTTTTGAATATAAGCCAAACAGCGATCGAAGGAATTCCCA CAAATTTGCATTTTGATAATCTCGTTAATCTTTTCATGTATGACATGATGAGTGTTCAACTATGGGAAGGAATGCAGCCG CTTACACCCCTCATGACCATGCTGCCTCCCACTTTGGAAATACTGTATCTCTCGGATATCCCTAGTTTGTTGGAGCTTCC TTCCTCAATTCAGAATCTCTATAAACTGGAGGTGTTGCACATTATTGACTGCACAAATCTGGAGACTCTTCCTGCCGAAA TAAACCTTGAATTTCTCAAGATCCTCCATCTTACTGGATGCTCACGGTTGAAGAGCTTTCCAAATATCTCAACCAATGTC TTGGCTCTCTTTCTAGAACAAACTGCTATTGAAGAAGTTCCTGGGTGGATCGAGAACTTTGATCACCTCACCTACCTACA CATGAGTGAATGCAACGAGTTAAAATATGTTTCCTTAAACATTTATAAATTGGAACATCTAGAGGTGGTTGACTTTTCAT ACTGCAGGTCGTTGACTGCAGCTAGCTGGATTGAAAGTCCATGTCTGCTGGCAATGGAAACAAAGAATATCCACTCGAAG TTTCGGGTCTCTAACGAGACTTCTGCTCTTCTTCCAGATAATTATGTCCCAAAAATCCAGCTCAAGCTGAGCAAATGCAA CGAATTGGATGAAGAAGCTATCCTTTGGCAACAACCATGGTTCTTCAAGTCCTTGATGTTTTTAGGTGATAAAGTGCCTC CATTTTTCACGCACCGTAATACTGGAACCACTCTCAGCGTCCCTCTACTTTACACCTCTCTTTCCCAACAGTTCTTCAAA TTCAAGGCTTGCGCAGTGGTTGCATCAACAACTTCCACATATATTCCATTCGAAATCCAGGTACATTGTTGGTTCATAGA CAGACTTGGGAACTACATCTATTCGGATAACTGGCCATTGACCATCACAACAGCTAAGTTTAATACTCATCTGGTTATTT TTGAGTGTTACTTCCATCGATTCCCTCTAAATGAAGACAATGCTCCACTAACGCAACTTAGTTACGATTACGTGGAGTTA GAGTTTTTCACGGAGTACTATGAATTCCAAATTATAGGATGTGGTATACGACTCCCTGAGGACGGTCCATATTTAAAAAG TGATAGGTATGGAGCCAGAGCGCTAAGAGGAAGAAGAGCCCCGAGTAGAAGATGGAATCCCGTGGGAAAAATTTACAGTA GGCTGAATATGAATCGAAGACGCAGGAAGCAAATGAGCGTCCCGCGTACACCCGTCAGGATCATGCTGTCAACTTTTTTG ACGTCTCTGGAACTCTCGCATATACCAATTTTGGTGGAGACTATTTCTTCATTCCAGATTCCTAATAATTTGAAGAAGTT GAGGATTATATATTGCATGGATCCGGAGACTCTTCCGGAAGGCATCAACTTAAAATCTCTCGACTTATACTATCTAACTA GATGCTCACGGCTTCAAACCTTTCCTGATGTCTCAACCAACATCTCAAAGCTCTATCTAAGTCATACAGGGATCGAAGAG GTTCCTTGGTGGATCAAATACCTGTCTCACCTAGTCTCCATGGAGATGTGGAAATGCAACCAGCTAAAATACATATCACC AAGAATTTTCCAACTTGATAATATTGACGTGGTTTTCTTCTCAGACTGTGAGCAGTTGGCAGAATTTGAAGGGACAAAAG AAGCAAAAGGCATCAACAATCCTCTCACCATGTTGATCATGTTCACCAACTGCTTCAGACTGAATCAAGTCGACGCATTC GCTCAACAATCAGCTTCCATGCATCTCATATTACCAGGTGTCAAAGTGTCTCCATGTGTTACTAACCTCTCTACTGGTAG CTTCCTTACCGTCTCTCGACATCATTCGCCTCTCTCTCAACAATCACCTTTGGACTTCAAGGCTTGTATCTTGCTTTCTG AAGTAACCGCTAGCCATCATCAGCTTTGCTTTATAGACATCCATGTACATTATCGTTTCATAGATAGCCACGGGAACTAC TTTGAGCCGGCTGAACCAAGCTGTTTCTCCTTGGATCAGAAAATTAATCACCTGATTATGTTTGACTGTCACTTCCCTCT AAACCAAGAGTGGGATCAAGTTGAGATAGAGTTTCGTCATAATAGTAACCGACTCAGACTAAAAGAATGCTGTATGCCAC TCTCGGATGACCCTACTCCATTTCTGGTAACTTGGAAAGAAATCGATGAAAGCAAATTTGATGATGATGAAGGCTATGCC ACTGCACTTAGTAAAGAAGAGTGGGGAGGCGACAGTGATGATATAGGCTATGAGACGGCAGATGATGAAGAAGATTGCGG ACACAATACTGATAATGAAGACTATGATACTGCACTTAGTGAAGACGAGTTTGGAGACAACCAAAGATCCTATTGA |
| AA seq | Len:1332 aa MLGIWGSSGIGKTTIARALLNRFSSRFQRSIFIDMAFVSKSKNLYPSANADDYNLKSHLRKEFLSEILGEKDTKKEHVGA LEERLKNRKVLIIIDDLDDPMVLDALVGQNHRFGRRSRIIMVTKDKHLLRARKVDCIYEVVLPSKDLSLKMLCRYAFCKD SPPDGLMELASEVALLAGNLPLGLKVLGSHLQGRNKEDCIDMLLRLRSGLDGRIGKTMRVSYDGLNNRKDKAIFRHIACF FNGAHINDIKELLANSDFDINIGLVNLIDKSLIQVRSGNVEMHCLLQEMGKEIVREESNDPGEREFLVDSKEICYVLSNT TGTKKILGISLDTNEIDELNVHEKAFESLHNLVFLNIYTKKRMMEEEERLHLPEGFNNFSSKLRLLCWDRYPISYMPSNF RPENLVKLQMQRSKLEKLWKGVCELKGLKIMDLGGSRNLMEIPNLSKATNLQILRLNNCSSLVELPSTIQYLNNLEELNM QFCENLEILPKGVNLESLDHLDLSGCSRLKSFPAISTNISFLNISQTAIEGIPTNLHFDNLVNLFMYDMMSVQLWEGMQP LTPLMTMLPPTLEILYLSDIPSLLELPSSIQNLYKLEVLHIIDCTNLETLPAEINLEFLKILHLTGCSRLKSFPNISTNV LALFLEQTAIEEVPGWIENFDHLTYLHMSECNELKYVSLNIYKLEHLEVVDFSYCRSLTAASWIESPCLLAMETKNIHSK FRVSNETSALLPDNYVPKIQLKLSKCNELDEEAILWQQPWFFKSLMFLGDKVPPFFTHRNTGTTLSVPLLYTSLSQQFFK FKACAVVASTTSTYIPFEIQVHCWFIDRLGNYIYSDNWPLTITTAKFNTHLVIFECYFHRFPLNEDNAPLTQLSYDYVEL EFFTEYYEFQIIGCGIRLPEDGPYLKSDRYGARALRGRRAPSRRWNPVGKIYSRLNMNRRRRKQMSVPRTPVRIMLSTFL TSLELSHIPILVETISSFQIPNNLKKLRIIYCMDPETLPEGINLKSLDLYYLTRCSRLQTFPDVSTNISKLYLSHTGIEE VPWWIKYLSHLVSMEMWKCNQLKYISPRIFQLDNIDVVFFSDCEQLAEFEGTKEAKGINNPLTMLIMFTNCFRLNQVDAF AQQSASMHLILPGVKVSPCVTNLSTGSFLTVSRHHSPLSQQSPLDFKACILLSEVTASHHQLCFIDIHVHYRFIDSHGNY FEPAEPSCFSLDQKINHLIMFDCHFPLNQEWDQVEIEFRHNSNRLRLKECCMPLSDDPTPFLVTWKEIDESKFDDDEGYA TALSKEEWGGDSDDIGYETADDEEDCGHNTDNEDYDTALSEDEFGDNQRSY* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |