Names & Information

Knowledge of BnaA02G0291900ZS:

Gene Name
BnaA02G0291900ZS
Gene Location
Gene Structure
Protein Name
Alternative splicing
Homology
Best Hit (NR)
BnaA02g23810D [Brassica napus]
Best Hit (SwissProt)
Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=2 SV=1
NT seq
Len:3030 nt

ATGGCGGCTTCTTCCACGGCACTTCCGCAACCTCAGATCTTCATTAATTTCCGGGGGAAGGATTTACGCTGTGGATTCGT
CAGCCATCTCGTCCGTGCCTTCAAAAGGAAGAAGATCAATGTATTTATCGATGAAAGGGAGGATAGAGGCCAACCTTTAG
ATTCTCTTTTTAAAAGGATAGAGGGGTCCACAATCGCCCTTGCTGTATTCTCCGAAAACTATCCCGAATCAAGATGGTGC
TTACAAGAGTTGGAGAAGATGAATGAGCGTATGGTGGAAGGCAACCTAGTGGTGATTCCCATCTTTTACAAGGTGGAGCC
ATCCACAGTGAGATACTTGAAGGGAAATTTTGGGGATAAGTTATGGATTATGGCCAAGGGTGATGAGAAGATTAAGAAGT
GGGAGGAAGCCTTGAGATCGATTCCTAATCTATTCGGCATCACTGTGGACGATAGAAGCGACGAGGGCCAAGCAGTCAAT
GAAGTTGTGAAGGCGGTTAAGTCAGTCCTGTTCAAAGTTTCGCTGATTGGGAGCCAAGGTGTTTCTATTCAACCTTCAAT
TAACAGTGACGCGGGAACTTCCTCTGGAGGAGACAAGCACAAGGCTTTTGGAGTGAAACTACGGCTGAAAGAGTTGGAAG
ATATGTTGGGTTGTGATAAATACAAAGGAACTCGTATCATTGGAGTTGTTGGGATGCCTGGGATAGGTAAAACCACACTC
ATGAAAGCGCTCTTAGAGAAGTTGCAGTTTAAGTTTATGAAGCACGCTCTAGTTGAGAATATCCGTGCAAAATCAGAGGA
CCCTGGGTTAGATTACTTACCCACATTGCTTTTGGAAGACTTACTGGGGGTGGAAGATCCTTTCACAGACAATGTTGAGG
ACCCGTACGAAACGTACAAGCCTCAATTGCTTAGACGCAAGGTTCTTGTTATTCTGGATGGTGTTAGTCAAAAGGAACAG
ATAGATGCTCTTCTCAGGAAAGGTGACTGGATTAGTGAAGGAAGCAGGATTGTCATTGCAACAAGTGACATATCCTTGAT
AAATGGTCTGGTTCACGATACTTACATGGTCCAGAATCTGGACCACAGGGACAGCTTAGAGCTCTTTAACTACCATGCCT
TTGGTGACGCTCAAGCCAATCCTCCCAATTACACAAAGCTGAGAGAGGAGGCTTTACATTACGCCAGAGGACATCCACTT
GCTCTCAAAATGTTGGGTAGAGAGCTTAAGAATCAAAGTATGGCTCAGTGGAAATCGAGTCTGGAGAAACTCGCCCAGAG
TCCAATCCCTGATATTGGAAGTGTCTTCCAAATGAGTTATGATGAACTGAGTTCAGAGCAGAAGGATGCGTTTCTTGACA
TAGCTTGTTTTAGATCGGAGAATGTGGATTATGTAGAAAGTTTACTGGCTTCACCTGACCCCGGATCTGCTGAAGCAATG
AGTGCAGTAAAAGCTCTCACGCATAAGTTCTTGATTAATACTTGTGACAGTCGAGTGGAGATGCATGATCTACTGTATAC
TTTTTCAAGAGACCTCGATTCCAAAGCATCCACTCAATATGGTAACAGAAAACGGAGGCTGTGTCTCCATCAAGACATAA
TCAAGGACGGTGTAATCAATGCGCAAAATAAGATGCAAGCTGCCAATGTCCGAGGTATTTTCCTAGACTTGTCTGAAGTG
AAAGGTGAAACGATCTTAGACTGCGACCACTTCATAAGGATGGTTAATCTCCGGTATCTCAAGTTCTACAATTCTCAGTG
TCCGCAGGAATGTAAAACCAACAATAAGATCAATATTCCTGATAAACTTAAGCTACCACTGAAAGAGGTTAGATGCCTCC
ACTGGCTGAAATTCCCACTGGAGGAACTTCCAAATGATTTCAACCCGGTGAATCTTGTTGACCTTAAGCTGCCCTTCAGC
GAGATTCGACAACTTTGGAAGGGTGACAAGGATACACCTTTCTTAAAGTGGGTTGATCTCAGTCACTCAAGTAAATTGTG
CAGCTTGTCAGGGTTATTAAAGGCTATAGATCTTCAAAGATTGGACCTTGAAGGCTGCACAGCATTAAAAACTTTGCCAG
GTGGTATGAGAAAGATGAAAAAGCTTGCTTTCCTGAATCTGAAAGGTTGCACAAGTCTCGAATCTATTCCAGAGATGAGT
TTAATTTCTCTGAAAACTCTTACTCTCAGTGGCTGCTTGAATTTTAAGGAATTTCCGTTGGTTTCAGAAAATCTTGAAAT
TCTATACTTGGATGGTACAGCAATAAGTCAGCTTCCTGAGAATATGGAGAAGCTACAGAGACTTGTTGTATTGAATATGA
AAAGTTGCAAAATGCTTCAGAAAGTCCCAGTCCGGGTTGGTGAGCTGAAAGCTCTTCAGGAACTGATACTCTCTGATTGT
TTAAATCTCAATTATTTTCCAGAAATCAGGATGAGCTCTTTAAACATTTTACTTTTGGATGGGACAGCCATTGAAGTGAT
GCCACAATTACCCTCAGTGCAGTACTTGTGCTTAAGCAGAAATGACAAGATCACATGTCTTCCTACTGGCATCAGTCAAC
TTGTTCAACTAAAGTGGTTGGATTTGAAGTACTGTAAGAGTCTTACATCTGTTCCAGAGTTTCCACCAAATCTTCAGTGC
TTAGATGCACACGGTTGTAGTTCGCTGAAGACAGTTTCGAAGCCTCTGGCCCGTATCATGCGAACCGAGCAGAACCCTTC
CACATTCATTTTTACCAACTGTAAGAACCTGGAACAATCTGCCAAGGAGGAAATCACATCGTATGCCCAAAGGAAATGTC
AGCTGCTGTCATATGCTCGTAAACGCTACAATGGGGTCTCTCTCTATATCTCTTTTTTACTCTTTGTATCGCTCTTTAAG
ATTCTTGTATCTCAAGAAACTCTGCAGTCTTATGTTTTTCCTTGTTTATATATTTGCAGGGTCTTGTTTCAGAGGCTTTG
TTCAGCACTTGCTTTCCTGGATGTGAAGTGCCTTCATGGTTTTGTCATGAAAGAGTTGGATCAGAGCTAG
AA seq
Len:1010 aa

MAASSTALPQPQIFINFRGKDLRCGFVSHLVRAFKRKKINVFIDEREDRGQPLDSLFKRIEGSTIALAVFSENYPESRWC
LQELEKMNERMVEGNLVVIPIFYKVEPSTVRYLKGNFGDKLWIMAKGDEKIKKWEEALRSIPNLFGITVDDRSDEGQAVN
EVVKAVKSVLFKVSLIGSQGVSIQPSINSDAGTSSGGDKHKAFGVKLRLKELEDMLGCDKYKGTRIIGVVGMPGIGKTTL
MKALLEKLQFKFMKHALVENIRAKSEDPGLDYLPTLLLEDLLGVEDPFTDNVEDPYETYKPQLLRRKVLVILDGVSQKEQ
IDALLRKGDWISEGSRIVIATSDISLINGLVHDTYMVQNLDHRDSLELFNYHAFGDAQANPPNYTKLREEALHYARGHPL
ALKMLGRELKNQSMAQWKSSLEKLAQSPIPDIGSVFQMSYDELSSEQKDAFLDIACFRSENVDYVESLLASPDPGSAEAM
SAVKALTHKFLINTCDSRVEMHDLLYTFSRDLDSKASTQYGNRKRRLCLHQDIIKDGVINAQNKMQAANVRGIFLDLSEV
KGETILDCDHFIRMVNLRYLKFYNSQCPQECKTNNKINIPDKLKLPLKEVRCLHWLKFPLEELPNDFNPVNLVDLKLPFS
EIRQLWKGDKDTPFLKWVDLSHSSKLCSLSGLLKAIDLQRLDLEGCTALKTLPGGMRKMKKLAFLNLKGCTSLESIPEMS
LISLKTLTLSGCLNFKEFPLVSENLEILYLDGTAISQLPENMEKLQRLVVLNMKSCKMLQKVPVRVGELKALQELILSDC
LNLNYFPEIRMSSLNILLLDGTAIEVMPQLPSVQYLCLSRNDKITCLPTGISQLVQLKWLDLKYCKSLTSVPEFPPNLQC
LDAHGCSSLKTVSKPLARIMRTEQNPSTFIFTNCKNLEQSAKEEITSYAQRKCQLLSYARKRYNGVSLYISFLLFVSLFK
ILVSQETLQSYVFPCLYICRVLFQRLCSALAFLDVKCLHGFVMKELDQS*
Expression(FPKM)
Classification(Core/Distributed)
Function classfication (GO)
GO:0005515
Pfam
Leucine Rich Repeat
KEGG
hypothetical protein; K16226 disease resistance protein RPS4 (A)