Names & Information
Knowledge of BnaA02G0292700NO:
| Gene Name | BnaA02G0292700NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA02g24500D [Brassica napus] |
| Best Hit (SwissProt) | Protein VARIATION IN COMPOUND TRIGGERED ROOT growth response OS=Arabidopsis thaliana GN=VICTR PE=1 SV=1 |
| NT seq | Len:3477 nt ATGGCTCTCCCATTAGCTTTGTCTTCCTCTTCTCGCACTTGGGTGTACGATGTTTTCCCAAGCTTCAGTGGGGCAGACGT TCGTGTTACTTTCCTCAGCCACTTTCGTAAGGAGCTTAACCGGAAACTGATCATTGCTTTCAAAGACAGTGAGATCGAGA AAAGCCACTCCATCGGACCCGAGCTTAAACAGGCCATTAAAGATTCGAGGATCGCGGTGGTTATCTTCTCCAAAAACTAC GCATCTTCAAGCTGGTGTCTTAATGAGTTGCTGGAGATAGTAAAGTGCAGGGAAGAGTGTGGTCAAATGGTGATACCTGT TTTCTACCGTTTAGATCCTTCCCATGTGAGGAAACAAACCGGTGAATTTGGTAAAATCTTTGAAAAGACATGCCACGACG AAACAGAGGAAGTGAAGATAAGATGGAGTGAAGCTTTGACCGATGTAGCTAATATCCTTGGATATCATTCTGTCATATGG GGTAACGAAGCAGACATGGTTGAAAAAATTGTCAATGATGTTATAGAGAAACTACTTTTAACTCCAGCAAAGGATTCTGA GGACTTTGTCGGCATCGAAGATCATATTGCAAAATTGAGTATGTTGTTGCAGTTGGAAGCAGAGGAAGTGAGGATGGTTG GTTTATGGGGTTCTTCCGGGATTGGAAAGACTACTATTGCAAGAGTTTTATTCAACCGACTTTCTCGACACTTTCAAGGT AGCATTTTCATAGACATGGCTTTCGTATCTAAGAGTATGGAAATTTTCAACAGAGCTAATCCGGACGACTACAATATGAA GTTGCATTTGCAAAAAAATTTCCTATCTGAAATCCTAGGGAACGGAGACATAAAGATAAATCATTTGAGTGCGGTTGAGG AGAGGCTGAAGAACAAGAAAGTTCTTATTTTCATTGATGATGTCAGGGATCAAGTTGTGCTAGATGCCTTGATTGGTCAA ATTCAATGGTTTGGAAGTGGGAGCAGAATCATTGTGGTAACAAACGATAAGCATTTTTTAAGGGCACTTGGGATTGAACA CATTTACGAGGTCTGTCTCCCATCTGAACACATTGCTATAGAGATGTTATGTCAATCTGCTTTCAGGAAAAAGTCTCCAC CTGAAGGTTTCGACGAGCTTGTTGTTGAAATTACAAGACTTGTTGGTAGTCTTCCTTTAGGTCTTACTGTTTTGGGTTCA TCTCTACGAGGAAGGGATATGGAGTACTGGATAGATTTGTTGCCAAGGCTTCAGAATGGTATAGATGGGAAAATTGAGAA AACATTGAGAATCAGCTATGATGGATTAAGCAGCGAAGATAAAGCTATATTTCGCCATGTCGCATGCCTTTTCAATGGTG CAAAAGTCACAAACCTGAAGTTGTTGCTCGCAGATAGTGGCTTGAATGTTAATGTTGGGCTGAAAAACCTAGCTGATAGG TCTCTCATTCATTTAAGAAAGGGTCATGTGGAAATGCACCGTTTGCTACAAGAGATGGGTAAAAAAGATGTTCGCCTTGA GAAGCCTGAAAACCAGGAATTTCTGATGGATTCACAAGATATTTGTGATGTACTCAGTGAAGGCATTGGTACTCAAAAGG TTATAGGTATAGCGTTGGATATTGATGAGATAGATGAGTTTTATGTGCATAAGAGTGCTTTCACAAGGATGCGCAATCTC CGTTTCCTCAAACTTTACTCGAGACTGAGATTGTACAGAGAAGGTAAATTGCAGCTACACGGAAACTTTGACTATTTGCC TCCTAAACTTAAATTATTGCATTGGGATGAATTTCCAATGAGATATATGCCTTCTAAGTTTCGTCCTGAAAACCTCGTCG AGCTCATAATGGAGGATAGCAAGCTCGAGAAGCTCTGGGAAGGGATTTTGACGCTTCCATGTCTCAAGGAGATGGATCTG TCCGGATCTCAGAACTTGATAGAAATGCCAGATCTTTCAAAGGCCACCAATCTAGAGACACTTAAACTTCGGAATTGCTA TAGTTTGGTGAAGCTTCCTTCCTCTATTCCACATCCCAACAAACTGACGACAATAAACTTGAAGAACTGTCGGAATCTGG AAACTATTCCAATAGGCATTAGCCTCAAATCTCTCGAAGTGCTAAATCTCTATGGATGCTCAATGCTGAGGACTATTCCC CTATTCTCAGTCAACATCTCACATCTCAGTATAGACGAAACATCCATCGAAGAAATCCCTTCAGTTTTGCAGCTGGAGAA TTTTCGTCTCGAGAATCTCTCTTATTTAAGCATGAAAAACATAAAGAGTGAGAAACTGTGGGAAAGGGTGCAGCCGCTTA CTCTCCTCACCACGATGCTGTCTCCCTCTTTGAATCAGTTGTATCTCTCGGAAATCCCAAGCTTGGTGGGGCTTCCATCT TCATTTCAGAATCTCCATCAACTGATGCATTTGGAAATTAAGAACTGCATAAATCTTGAGACTCTTCCCACTGGAATCAA CCTCCAATCTCTGTGGGAACTAAATCTTAGTGGATGCTCAAGGTTGAGGACTTTTCCCGATATCTCTACCAACATCGGAA GACTCTATCTAAGCGAAACTGGGATTGAAGAGGTTCCTAGGTGGATTGAGAAATTATCCTGGCTTAGAGTCCTGTACTTG AATGGATGCATAAATCTGGAGACTCTTCCCACCAGAATCAACCTTCCATCTCTCTATGTCTTAGATCTCAGTGGATGCTC ACGGTTGAGGGATTTTCCTGATATCTCAACCAACATCAAAGTCATATGGATGAAAGGGTGCAACAAGTTAGAATATGTCA ACCTTAACTTTTTTAAACTTACAAGACTTGAGGAAGTTGACTTTTCAAACTGCTTAAATTTGGATAAAGAAGCTCTGTTT CAACAGAGAACATATTTGGGTTGTCAACTGTGGTTTTCAGGAGAAGAAGTACCTTCATATTTCACTCACCGTACTACTGG AACCTCCTCCTCTTTAACCGTCCATCTACTTCCCAGCTCTCTCTCGCAGCCATTCCTCAGATTCAGGGCTTGCCTTGTGC TTTTTGACAACTACGTAGCTAATTTCCGCTTCAAAGGCAGATTTTGGAACAGCTTTGATTCCTTTGGTCAACAGGCACAA GACTTCTGGGGTGAAACAGAGTATTATTCGATCAAGCCATTTGTGAAGGGTAGTCATCTGTTAATATTGGACTGTGATAT CCATCTAAGCATAGGCAGTGATATCCTAGCTGAAATGAACTACACCCATGTAGATTTGCAGCTTGATTTTCCCTCTGAGT ACGAATTGAAAGAATGGGGTATACGACTCTGTTCACTAGCGGAGAACCAACTTGGTAATCCAAACACTCTACCACATGTT TTCGAAACCGATGGAGGCAATACGCTTTATCAGGCCGGAGAAGGTGAAGGATGTGGAAGCAATGATGAAGTGACCGAAAG AAGCAGTAAAAGAATGCGGGTAAATCATTATACATGA |
| AA seq | Len:1159 aa MALPLALSSSSRTWVYDVFPSFSGADVRVTFLSHFRKELNRKLIIAFKDSEIEKSHSIGPELKQAIKDSRIAVVIFSKNY ASSSWCLNELLEIVKCREECGQMVIPVFYRLDPSHVRKQTGEFGKIFEKTCHDETEEVKIRWSEALTDVANILGYHSVIW GNEADMVEKIVNDVIEKLLLTPAKDSEDFVGIEDHIAKLSMLLQLEAEEVRMVGLWGSSGIGKTTIARVLFNRLSRHFQG SIFIDMAFVSKSMEIFNRANPDDYNMKLHLQKNFLSEILGNGDIKINHLSAVEERLKNKKVLIFIDDVRDQVVLDALIGQ IQWFGSGSRIIVVTNDKHFLRALGIEHIYEVCLPSEHIAIEMLCQSAFRKKSPPEGFDELVVEITRLVGSLPLGLTVLGS SLRGRDMEYWIDLLPRLQNGIDGKIEKTLRISYDGLSSEDKAIFRHVACLFNGAKVTNLKLLLADSGLNVNVGLKNLADR SLIHLRKGHVEMHRLLQEMGKKDVRLEKPENQEFLMDSQDICDVLSEGIGTQKVIGIALDIDEIDEFYVHKSAFTRMRNL RFLKLYSRLRLYREGKLQLHGNFDYLPPKLKLLHWDEFPMRYMPSKFRPENLVELIMEDSKLEKLWEGILTLPCLKEMDL SGSQNLIEMPDLSKATNLETLKLRNCYSLVKLPSSIPHPNKLTTINLKNCRNLETIPIGISLKSLEVLNLYGCSMLRTIP LFSVNISHLSIDETSIEEIPSVLQLENFRLENLSYLSMKNIKSEKLWERVQPLTLLTTMLSPSLNQLYLSEIPSLVGLPS SFQNLHQLMHLEIKNCINLETLPTGINLQSLWELNLSGCSRLRTFPDISTNIGRLYLSETGIEEVPRWIEKLSWLRVLYL NGCINLETLPTRINLPSLYVLDLSGCSRLRDFPDISTNIKVIWMKGCNKLEYVNLNFFKLTRLEEVDFSNCLNLDKEALF QQRTYLGCQLWFSGEEVPSYFTHRTTGTSSSLTVHLLPSSLSQPFLRFRACLVLFDNYVANFRFKGRFWNSFDSFGQQAQ DFWGETEYYSIKPFVKGSHLLILDCDIHLSIGSDILAEMNYTHVDLQLDFPSEYELKEWGIRLCSLAENQLGNPNTLPHV FETDGGNTLYQAGEGEGCGSNDEVTERSSKRMRVNHYT* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | - |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |