Names & Information
Knowledge of BnaA02G0353800NO:
| Gene Name | BnaA02G0353800NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC02g38690D [Brassica napus] |
| Best Hit (SwissProt) | Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis thaliana GN=SNC1 PE=1 SV=3 |
| NT seq | Len:3954 nt ATGGCTTCTTCTTCTTCTTCTTCTTCTTCTAGCAACGGGAGATACCATGTTTTCCCCAGCTTCCGTGGAGAAGATGTCCG CAACTCATTCCTAAGCCATCTTATCATGGAGCTTGAACGCAACTTGATCACTACATTCATCGACCATGGCATCGACAGAA GCCGCCCTATCGGATCCGAGCTTTTATTGGCGATAAAAGAATCGAGAATAGCGATCGTCATCTTCTCTAAGAACTACGCC TCGTCAACATGGTGTTTGAACGAACTGGTGGAGATCCACAAGTGCTTTAAGGATCTGAATCAGATGGTGATACCAATTTT TTACCATGTCGATCCTTCTGATGTTAGAAAGCAGACCGGGGAATTCGGCGATAGGTTTAAAGAAATCTGCATGGACAAAA CAGAAGATGAGATAGAAAGGTTGGTTCGAGCACTAACGGATGTAGCAAATTTGGCCGGACAGGATTCTAAGAATTGGATC GGTGAAGGCGAAGCAAAAATGATTGAACATATAGCTAAGGATGTGTTCAACAAAGTTATGATACCATCAAACAATTTTAG CGACTTTGTGGGGATTGAAGCTCATTTTCAGAGGTTGAATAATCTTTTGTGTTTGGAGTCTGAGGAGGTTAGAAAGGTAG GAATTTGGGGCCCTTCAGGGATAGGTAAGAGTACCATAGGAAGAGTTCTTTTTAGTCAACTCTCTAGCCGATTCCACCAC CATGCTTTTGTCTCTTACAAGAGTACAAAACAGTGGGATGACTATAGCATGAAGTTGTCTTTGGATGAACGACTTCTGTC GGAAATTTCATGTCAAAAGGACCTAAAGATATCCCATTTAGGTGTAGTGAAACAAATGCTAAACCACAAGAAAGTTCTTA TCATCGTTGATGATGTGGATGATCTTGAAGTGCTAAACACCTTCATGGATCAAACTCGTTTGGTTGGATCCGGGAGCAGA ATCATTGTGATAACTCAAGATAGGAAACTTTTAAAGTCTCAAGAGATTGAGCTTATTTATGAGGTCGAGCTCCCATCGTA CGATCTGGCTATACAAATGTTCTGTCGATCTGCGTTTGGGAAAAACTCTCCGCCTTATGGTTTCGAAGAACTCACGGAGG AAGTTGCATTGCATTCAAGTAATCTCCCTTTAGGTCTAAGTGTCTTGGGTTCGTCTTTGAAAGGGATGACGAAGGTGGAG TGGGTGGAGATGCTGCCTAGGCTCCTGAATAGTTTGGATGGGAAAATCAAGAATACACTAAAAGTTTGCTATGATAGGTT AGATGTCAAAGAGCAAGAATTGTTCCTTTGGATTGCATGCCTATCCGATGGTCCTAACGTCAGTTTCTTAAAAGACTTGC TTGGAGATAGTGCTGAAATTGGGCTCAAAATACTGAATGACAAGTCCCTAATACGTAGGGAATCAACAGAATTTGTTCGA ATGCACAGTTTGTTACAGAAGTTGGGTAAAGAAATCAATCGTGCAGATCCCATCAACAACCGTAGGTTCTTGACGGAAGC TGAGGATATATGTGATGTACTTACCGATAATGCTGGCACTAAGAATACTCTAGCCATGTATTTGAACATGTCGGAAATCA ACGAGCCATTGTCTATGGATGAAAATTCATTTCAAAGAATGCGTAATCTGAAACTTCTACACTTTTACAAACCCTGGTGG TGGTCAAGGGAGACTGGAAAAGGCAGATTGACTTTACCTGATCGAGGTCTGCATCATTTTCCACGCAAACTCAGATTGCT ACGTTGGGATGAATATCCATCCAAGTGCATGCCTTTTAACTTTAGAGCGGAAAGTCTGGTTGAAATCAGAATGGAGTATA GTAAGCTTGAGAAGTTGTGGGAAGGAACTCAGTTTCTTGGAAGTTTGAAGGAGATGGATATGAGTTATTCTGCAGATTTA AAAGAGATTCCAGATCTTTCAAAAGCAATAAATGTCAAGAAATTGAATCTTCGGGGATGCAAATCTTTGTTGGCACTTCC TTCCTCAATTGGAAATCTCAGTAATCTGTTTCTATTGAAGCTTAAGGGATGCACATCTTTGGTGACACTTCCTTCCTCAA TTGGGAAACTCAGTAAACTATCTAAACTGGACATGTCGAAATGCTCAAACCTTAAGTTTCTACCAGCTGATGTCAACTTG GAATCTCTTTTAATTCTCAAACTTAACGGATGCTCACAGTTGAGAATGTTTCCTCGTATATCAAGGAACACTGAATGGCT TTACCTAGAAGAAACTGCATTAGAAAGAGAAGAAGATAGTTCTTGGATTGAGAATATCCCTCACCTTAAAGAACTCTATT GGGATGATGTACCATTGAGTTGTATGCCACCTAATCTCAACCCAGAATATATGAAGTACCTTAAAATGAGAGGTGGCAGG CTTAAGAAGTTATGGGGAGGGGTAAAGTCGCTTGAATATCTCAGGGAGATGGATTTGTCAGGATGTGAAAGCCTAGTCGA AATTCCAGATCTTTCAATGGCCATCGGCCTTAGGTATTTGGAACTCAAAAATTGTAAAAGCTTGGTTATGCTTCCTTCCT CAATTAGGAATCTCAACCAACTCGAGCGCTTGAACATGGAAGGGTGCACAATGCTCGAGGTTCTACCAGTCGACATCGAC TTGCCTAATCTTGGACAACTCAATCTCAGTGGATGCTTAAAATTGAGAAATTTTCCTCAGATTTCAACCCGCATTGAATT TCTCTATCTAGATGACACTGCGATTGAAGAAATTCCTTCCTGGATTAAGAACATGTCTAGACTCTGGGAACTAACAATGC GTCGGTGCAAGAATTTAAAGAAAATCTCCGCAGAGATTTTTAAATGGCAATATCTTGAGGCAGACTTTTCAGACTGTGGA GGAATCACAACAATCTGTGATCACTTACCAGGATGGCCACACAATGATTTCTTTGATATTTCTTCATTTTCTTCTTACAG ATATCCGCAAGTGACTCCTTTCAAGTTCTATAATTGCTTCAGTTTGGATCGAGATGCACAGGAAATCATAATACAATCAT ACCCAGACATGGCCGTTATACCAGGTGGAGAAGTGCCTATGTATTTCACACATCGAGGTTGTGGAAGTTCCCTAAGTATC CTTTTGTCTGAGAGCTCTCTTTCTCAAGAATCTCTATTACTGAAAACTTGCCTCGTGGTCGGACCTTCAAGTCACTACCC CGCCAGATACATACAAGTTCGTCAGTCCTTTCGAGGCCAAAAAGAAGAGATTCATTGTGATGTTAAAGTGGACGCCGCGT GCACATACGAGAAGGATCATCAGGTTTTGTTCATCTTACATATTCAAATAAAAGGAGTGGATAACCCGCCATCTGAACTG AACAACAATGTTCTACTACTTGAGTTTTATACCAACCATTATGTCCGATATGGTGGAGGGTGTTCTCGCCGCAAACAAAT TTCTACCGTTGAAGGGATAAAAGGATGCGGTGCACGAGTCATGAATATCTCAGAAACAGACGGCGAGCGTAACAGACGAA AGAAGAAGATGCGGATGACAGTTCCAACATTCCAAGAGCATACCAACTCTCCGTATATCCAACCTGCAGTGAATTCCAGA CTAGTGGCTCCGGATTTGGACCTTTCCCTGGGGCTGGCTGGAGTATCTAGTGGTGAAGAAAGTGACGAAGAAAGTGATGA AGAGAGCAACCGAAGCAAGAAAAAGATGCGGATGACAGTTCCAACATTTCAGGAACATTCCAACTCTTTGTACATCCAAA CTGCAGTGAATTTCGAACCGATGGCTCAAAATATGGAGCTTTCCTTGGGGTTGGCTGGAGCATCTCCTTTTGACCCGTGT CTTGGCAGAGAATCTTTGCATTCTGAACCCATGATAATCGAGCAACAAAACACAGGTGCATCCGACGAAGAGGATCCTTC ATTTTCTGCACTGCTTTTAAACTTTTTCACCTAG |
| AA seq | Len:1318 aa MASSSSSSSSSNGRYHVFPSFRGEDVRNSFLSHLIMELERNLITTFIDHGIDRSRPIGSELLLAIKESRIAIVIFSKNYA SSTWCLNELVEIHKCFKDLNQMVIPIFYHVDPSDVRKQTGEFGDRFKEICMDKTEDEIERLVRALTDVANLAGQDSKNWI GEGEAKMIEHIAKDVFNKVMIPSNNFSDFVGIEAHFQRLNNLLCLESEEVRKVGIWGPSGIGKSTIGRVLFSQLSSRFHH HAFVSYKSTKQWDDYSMKLSLDERLLSEISCQKDLKISHLGVVKQMLNHKKVLIIVDDVDDLEVLNTFMDQTRLVGSGSR IIVITQDRKLLKSQEIELIYEVELPSYDLAIQMFCRSAFGKNSPPYGFEELTEEVALHSSNLPLGLSVLGSSLKGMTKVE WVEMLPRLLNSLDGKIKNTLKVCYDRLDVKEQELFLWIACLSDGPNVSFLKDLLGDSAEIGLKILNDKSLIRRESTEFVR MHSLLQKLGKEINRADPINNRRFLTEAEDICDVLTDNAGTKNTLAMYLNMSEINEPLSMDENSFQRMRNLKLLHFYKPWW WSRETGKGRLTLPDRGLHHFPRKLRLLRWDEYPSKCMPFNFRAESLVEIRMEYSKLEKLWEGTQFLGSLKEMDMSYSADL KEIPDLSKAINVKKLNLRGCKSLLALPSSIGNLSNLFLLKLKGCTSLVTLPSSIGKLSKLSKLDMSKCSNLKFLPADVNL ESLLILKLNGCSQLRMFPRISRNTEWLYLEETALEREEDSSWIENIPHLKELYWDDVPLSCMPPNLNPEYMKYLKMRGGR LKKLWGGVKSLEYLREMDLSGCESLVEIPDLSMAIGLRYLELKNCKSLVMLPSSIRNLNQLERLNMEGCTMLEVLPVDID LPNLGQLNLSGCLKLRNFPQISTRIEFLYLDDTAIEEIPSWIKNMSRLWELTMRRCKNLKKISAEIFKWQYLEADFSDCG GITTICDHLPGWPHNDFFDISSFSSYRYPQVTPFKFYNCFSLDRDAQEIIIQSYPDMAVIPGGEVPMYFTHRGCGSSLSI LLSESSLSQESLLLKTCLVVGPSSHYPARYIQVRQSFRGQKEEIHCDVKVDAACTYEKDHQVLFILHIQIKGVDNPPSEL NNNVLLLEFYTNHYVRYGGGCSRRKQISTVEGIKGCGARVMNISETDGERNRRKKKMRMTVPTFQEHTNSPYIQPAVNSR LVAPDLDLSLGLAGVSSGEESDEESDEESNRSKKKMRMTVPTFQEHSNSLYIQTAVNFEPMAQNMELSLGLAGASPFDPC LGRESLHSEPMIIEQQNTGASDEEDPSFSALLLNFFT* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |