Names & Information
Knowledge of BnaA02G0362200ZS:
| Gene Name | BnaA02G0362200ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC02g38690D [Brassica napus] |
| Best Hit (SwissProt) | Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis thaliana GN=SNC1 PE=1 SV=3 |
| NT seq | Len:3993 nt ATGGCTTCTTCTTCTTCTTCTTCTAGCAACGGGAGATACCATGTTTTCCCCAGCTTCCGTGGTGAAGATGTCCGCAACTC ATTCCTAAGCCATCTTCTCATGGAGCTTGAACGCAACTTGATCACTACATTCATCGACCATGGCATCGACAGAAGCCGCC CTATCGGATCCGAGCTTTTATTGGCGATAAAAGAATCGAGAATAGCGATCGTCATCTTCTCTAAGAACTACGCCTCGTCA ACATGGTGTTTGAACGAACTGGTGGAGATCCACAAGTGCTTTAAGGATCTGAATCAGATGGTGATACCAATTTTTTACCA TGTCGATCCTTCTGATGTTAGAAAGCAGACCGGGGAATTCGGCGATAGGTTTAAAGAAACCTGCATGGACAAAACAGAAG ATGAGATAGAAAGGTTGGTTCGAGCACTAACGGATGTAGCAAATTTGGCCGGACAGGATTCTAAGAATTGGACTGTTGAA GGCGAAGCAAAAATGATTGAGCATATAGCAAAGGATGTGTTCAATAAGTCCCTTTCATATATTCGATGTGGGATCTTCTC TCCAATAGTTATGATACCATCAAACGATTTTAGCGACTTTGTGGGGATTGAAGCTCATTTTCAGAGGTTGAATAATCTTT TGTGTTTGGAGTCTGAGGAGGTTAGAAAGGTAGGAATTTGGGGCCCTTCAGGGATAGGTAAGAGTACCATAGGAAGAGTT CTTTTTAGTCAACTCTCTAGCCGATTCCACCACCATGCTTTTGTCTCTTACAAGAGTACAAAACAGTGGGATGACTATAG CATGAAGTTGTCTTTGGATGAACGACTTCTGTCGGAAATTTCATGTCAAAAGGACCTAAAGGTATCCCATTTAGGTGTAG TGAAACAAATGCTAAACCACAAGAAAGTTCTTATCATCGTTGATGATGTGGATGATCTTGAAGTGCTAAACACCTTCATG GATCAAACTCGTTTGGTTGGATCCGGGAGCAGAATCATTGTGATAACTCAAGATAGGAAACTTTTAAAGTCTCAAGAGAT TGAGCTTATTTATGAGGTCGAGCTCCCATCGTACGATCTGGCTATACAAATGTTCTGTCGATCTGCGTTTGGGAAAAACT CTCCGCCTTATGGTTTCGAAGAACTCACGGAGGAAGTTGCATTGCATTCAAGTAATCTCCCTTTAGGTCTAAGTGTCTTG GGTTCGTCTTTGAAAGGGATGACGAAGGTGGAGTGGGTGGAGATGCTGCCTAGGCTCCTGAATAGTTTGGATGGGAAAAT CAAGAATACACTAAAAGTTTGCTATGATAGGTTAGATGTCAAAGAGCAAGAATTGTTCCTTTGGATTGCATGCCTATCCG ATGGTCCTAACGTCAGTTTCTTAAAAGACTTGCTTGGAGATAGTGCTGAAATTGGGCTCAAAATACTGAATGACAAGTCC CTAATACGTAGGGAATCAACAGAATTTGTTCGAATGCACAGTTTGTTACAGAAGTTGGGTAAAGAAATCAATCGTGCAGA TCCCATCAACAACCGTAGGTTCTTGACGGAAGCTGAGGATATATGTGATGTACTTACCGATAATGCTGGCACTAAGAATA CTCTAGCCATGTATTTGAACATGTCGGAAATCAACGAGCCATTGTCTATGGATGAAAATTCATTTCAAAGAATGCGTAAT CTGAAACTTCTACACTTTTACAAACCCTGGTGGTGGTCAAGGGAGACTGGAAAAGGCAGATTGACTTTACCTGATCGAGG TCTGCATCATTTTCCACGCAAACTCAGATTGCTACGTTGGGATGAATATCCATCCAAGTGCATGCCTTTTAACTTTAGAG CGGAAAGTCTGGTTGAAATCAGAATGGAGTATAGTAAGCTTGAGAAGTTGTGGGAAGGAACTCAGTTTCTTGGAAGTTTG AAGGAGATGGATATGAGTTATTCTGCAGATTTAAAAGAGATTCCAGATCTTTCAAAAGCAATAAATGTCAAGAAATTGAA TCTTCGGGGATGCAAATCTTTGGTGGCACTTCCTTCCTCAATTGGAAATCTCAGTAATCTGTTTCTATTGAAGCTTAAGG GATGCACATCTTTGGTGACACTTCCTTCTTCAATTGGGAAACTCAGTAAACTATCTAAACTGGACATGTCGAAATGCTCA AACCTTAAGTTTCTACCAGCTGATGTCAACTTGGAATCTCTTTTAATTCTCAAACTTAACGGATGCTCACAGTTGAGAAT GTTTCCTCGTATATCAAGGAACATTGAATGGCTTTACCTAGAAGAAACTGCATTAGAAAGAGAAGAAGATAGTTCTTGGA TTGAGAATATCCCTCACCTTAAAGAACTCTATTGGGATGATGTACCATTGAGTTGTATGCCACCTAATCTCAACCCAGAA TATATGAAGTACCTTAAAATGAGAGGTGGCAGGCTTAAGAAGTTATGGGGAGGGGTAAAGTCGCTTGAATATCTCAGGGA GATGGATTTGTCAGGATGTGAAAGCCTAGTCGAAATTCCAGATCTTTCAATGGCCATCGGCCTTAGGTATTTGGAACTCA AAAATTGTAAAAGCTTGGTTATGCTTCCTTCCTCAATTAGGAATCTCAACCAACTCGAGCGCTTGAACATGGAAGGGTGC ACAATGCTCGAGGTTCTACCAGTCGACATCGACTTGCCTAATCTTGGACAACTCAATCTCAGTGGATGCTTAAAATTGAG AAATTTTCCTCAGATTTCAACCCGCATTGAATTTCTCTATCTAGATGACACTGCGATTGAAGAAATTCCTTCCTGGATTA AGAACATGTCTAGACTCTGGGAACTAACAATGCGTCGGTGCAAGAATTTAAAGAAAATCTCCGCAGAGATTTTTAAATGG CAATATCTTGAGGCAGACTTTTCAGACTGTGGAGGAATCACAACAATCTGTGATCACTTACCAGGATGGCCACACAATGA TTTCTTTGATATTTCTTCATTTTCTTCTTACAGATATCCGGGAGGAGTGACTCCGTTCAAGTTCAAAAATTGCTTTGATT TGGATAGAGATGCACAGGAAATTATTATACAATCAAACCCAATCATGGCCGTTATACCAGGTGGAGAAGTGCCTATGTAT TTCACACATCGAGGTTGTGGAAGTTCCCTAAGTATCCTTTTGTCTGAGAGCTCTCTTTCTCAAGAATCTCTATTACTGAA AACTTGCCTCGTGGTCGGACATTCAAGTCACTACCCCGCCAGATACATACAATTGCCGCTGCTAGTCGCGCGTTTGCCAA AAGAACATGACTATTGTGATGTTAAAGTGGACGCCGCGTGCACATACGAGAAGGATCATCAGGTTTTGTTCATCTTACAT ATTCAAATAAAAGGAGTGGATAACCCGCCATCTGAACTGAACAACAATGTTCTACTACTTGAGTTTTATACCAACCATTA TGTCCGATATGGTGGAGGGTGTTCTCGCCGCAAACAAATTTCTACCGTTGAAGGGATAAAAGGATGCGGTGCACGAGTCA TGAATATCTCAGAAACAGACGGCGAGCGTAACAGACGAAAGAAGAAGATGCGGATGACAGTTCCAACATTCCAAGAGCAT ACCAACTCTCCGTATATCCAACCTGCAGTGAATTCCAGACTAGTGGCTCCGAATTTGGACCTTTCCCTGGGGCTGGCTGG AGCATCTAGTGGTGAAGAAAGTGACGAAGAAAGTGATGAAGAGAGCAACCGAAGCAAGAAAAAGATGCGGATGACAGTTC CAACATTTCAGGAACATTCCAACTCTTTGTACATCCAAACTGCAGTGAATTTCGAACCGATGGCTCAAAATATGGAGCTT TCCTTGGGGTTGGCTGGAGCATCTCCTTTTGACCCGTGTCTTGGCAGAGAATCTTTGCATTCTGAACCCATGATAATCGA GCAACAAAACACAGGTGCATCCGACGAAGAGGATCCTTCATTTTCTGCACTGCTTTTAAACTTTTTCACCTAG |
| AA seq | Len:1331 aa MASSSSSSSNGRYHVFPSFRGEDVRNSFLSHLLMELERNLITTFIDHGIDRSRPIGSELLLAIKESRIAIVIFSKNYASS TWCLNELVEIHKCFKDLNQMVIPIFYHVDPSDVRKQTGEFGDRFKETCMDKTEDEIERLVRALTDVANLAGQDSKNWTVE GEAKMIEHIAKDVFNKSLSYIRCGIFSPIVMIPSNDFSDFVGIEAHFQRLNNLLCLESEEVRKVGIWGPSGIGKSTIGRV LFSQLSSRFHHHAFVSYKSTKQWDDYSMKLSLDERLLSEISCQKDLKVSHLGVVKQMLNHKKVLIIVDDVDDLEVLNTFM DQTRLVGSGSRIIVITQDRKLLKSQEIELIYEVELPSYDLAIQMFCRSAFGKNSPPYGFEELTEEVALHSSNLPLGLSVL GSSLKGMTKVEWVEMLPRLLNSLDGKIKNTLKVCYDRLDVKEQELFLWIACLSDGPNVSFLKDLLGDSAEIGLKILNDKS LIRRESTEFVRMHSLLQKLGKEINRADPINNRRFLTEAEDICDVLTDNAGTKNTLAMYLNMSEINEPLSMDENSFQRMRN LKLLHFYKPWWWSRETGKGRLTLPDRGLHHFPRKLRLLRWDEYPSKCMPFNFRAESLVEIRMEYSKLEKLWEGTQFLGSL KEMDMSYSADLKEIPDLSKAINVKKLNLRGCKSLVALPSSIGNLSNLFLLKLKGCTSLVTLPSSIGKLSKLSKLDMSKCS NLKFLPADVNLESLLILKLNGCSQLRMFPRISRNIEWLYLEETALEREEDSSWIENIPHLKELYWDDVPLSCMPPNLNPE YMKYLKMRGGRLKKLWGGVKSLEYLREMDLSGCESLVEIPDLSMAIGLRYLELKNCKSLVMLPSSIRNLNQLERLNMEGC TMLEVLPVDIDLPNLGQLNLSGCLKLRNFPQISTRIEFLYLDDTAIEEIPSWIKNMSRLWELTMRRCKNLKKISAEIFKW QYLEADFSDCGGITTICDHLPGWPHNDFFDISSFSSYRYPGGVTPFKFKNCFDLDRDAQEIIIQSNPIMAVIPGGEVPMY FTHRGCGSSLSILLSESSLSQESLLLKTCLVVGHSSHYPARYIQLPLLVARLPKEHDYCDVKVDAACTYEKDHQVLFILH IQIKGVDNPPSELNNNVLLLEFYTNHYVRYGGGCSRRKQISTVEGIKGCGARVMNISETDGERNRRKKKMRMTVPTFQEH TNSPYIQPAVNSRLVAPNLDLSLGLAGASSGEESDEESDEESNRSKKKMRMTVPTFQEHSNSLYIQTAVNFEPMAQNMEL SLGLAGASPFDPCLGRESLHSEPMIIEQQNTGASDEEDPSFSALLLNFFT* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |