Names & Information
Knowledge of BnaA03G0045400NO:
| Gene Name | BnaA03G0045400NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | disease resistance protein [Brassica rapa subsp. pekinensis] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:2457 nt ATGGATTCTTCTTTTTTCCTCACCACTGTTGCTGCTGCAATAGGACTCTTAACTCTTGTGAGAAAACTTCGTTTACATCA AGAAGATAACAGAGAAAAGGATCCTTCTTCTTCATCACCCTCGTCTACTTTGTCTCCTTCAATAGTTCCTCCACCTTCAT CTTATCGCATCTGGACGCATGATGTCTTTCCAAGCTTCCGTGGGGAAGATGTCCGCAGAAACTTTCTTAGTCACATTCAG ATGGAGTTCGAAAGAAAAGGAATCACTCCGTTCATTGATAATGAAATCAAAAGAGGAGAATCTATCGGTCCCGAGCTCAT AAGGACGATCAGAGGATCTAAGATCGCAATTATCTTGCTCTCTAGGAACTATGCCTCCTCAAAATGGTGTCTTGATGAAT TGGTTGAGATTATGAAGTGCAGAGAAGAGTTGGGTCAAACTGTGATGGCTGTTTTCTATGAAGTGGATCCTTCTGATGTG AAAAATCTAGCAGGACATTTTGGGAGAGTCTTTAGAAAAACTTGTGCTGGTGAAACGAAGGAAAACATTGGGAGATGGAG ACAAGCTTTGGCAAAAGTGGCCACAGTAGCTGGTTATCATTCAAGCAACTGTAAAAGTGTCATAGGGATAAAGCTGGACT ACTACAAAATAGAGGAAGAATTAGATGTAAGTGAGAAAGCCTTTGACGGAATGTCAAATCTCCAATTCTTACAAGTCAAT GGTTATGGCGCTCCATTGCAATTAACTCGAGGTCTGAACTATTTGTCTCATAAACTTCGATTACTACACTGGAGTCATTT TCCAATGTCATGTTTTCCTTGCAATGTAAACTTGGAATTCCTTGTCGAACTAATCATGATTGGCAGCAAGCTTGAGAAGT TGTGGGAAGGAATTAAACCGCTTCGAAGTCTCAAGTGGATGGATTTGAGTGATTCTGTAAACTTGAAGGAGCTTCCTAAT CTCTCAACTGCCACTAACCTTGAGAAATTGTATTTACGTAATTGCTGGAGTCTAATCAAACTCCCTTGCTTGCCTGGAAA AAGTATGGAGGAACTAGATATAGGTGGATGCTCAAGTCTTGTGCAGTTTCCCTCCTTTACTGGGAATGCCGTTAATCTCC TCAAATTGAATCTTGTCAGTTTCCCAAATTTGGTGGAGCTCCCTTCATATGTTGGGAATGCCACCAACCTGGAGAATTTA AATCTTAGTAACTGCTCGCATCTGGTGGAACTTCCTCTCTCGTTTGGAAACCTGCAGAAGTTGCAGACACTGATACTAAA AGGATGCAGTAAGCTAGAGAATTTTCCCAACAACATCACCTTGGAATTTTTGAATGATCTTGATCTCGCTGGATGTTCAA GTCTTGATCTCCGTGGATTCTCCACTATCGGAAATGTCGTCAATCTTCAGACATTGAATTTAAGTAGTCTACCACAATTG TTGGAGGTACCTTCTTTCATTGGGAATGCCACTAATCTAGAGGACTTGATACTTAGTAATTGCTCAAATCTGGTGGAACT TCCTCTTTTCATTGGAAACCTTCAGAAGTTGAAAAGGCTGAGATTAGAAGGATGCAGCAAGCTAGAGGTTCTTCCCACCA ACATCAACTTGGAATCTTTGTTTGAACTTAATCTCAATGATTGCTCCATGTTGAAACGTTTTCCTGAGATCTCCACAAAC ATTAGAAATCTCTACCTCATAGGAACTGCAATAGAACAAGTGCCTCCCTCGATCAGGTCATGGTCTCGTCTTGATGAGTT GAAGATGTCATACTTTGAAAACCTCAAGGAATTCCCTCATGCTCTTGAAAGAATCACATGCATGTGCTTGACTGACACAG AGATACAAGAGCTTCCTCCATGGGTCAAGAAAATCTCTCGTCTGAGTGTATTCGTGCTCAAGGGATGCCGAAAGTTGGTA ACACTCCCAGCCATTTCGGAGTCCATCCGTTACATGGATGCAAGTGACTGCAAGTCCCTGGAGATACTAGAGTGCTCCTT TCACAATCAATACCTTACGCTCAACTTTGCCAACTGCTTCAAACTGAGTCAAGAAGCGAGAAACCTCATCATCCAGAATA GTTGTAGATATGCAGTCTTACCAGGTGGCCAAGTGCCTCCACACTTCACTCACCGAGCTACTGGTGCAGGTCCATTGACA ATCAAGTTGAACGAAAAGCCTCTTCCAAAGTACATGATATTTAAAGCTTGCATCTTGCTGGTTTATAAAGTTGACCATGA CGCTTGCTCTGAAGAGAACTCAATGGAAGTGGATGTCATATATCAAAATAGCAATAAAAAGCTGTATCCGGCTTTAGCAG AGCATCTGTACATATTTCGAGTCGAAGCGGAGGTTACTTCCAGCGAGCTTTTCTTTGAGTTCAAGCTGAAAAGGGATGAT GTTTGGAAGATAGGAGAATGTGGGCTAGTCCGAGACGTGGAGGTCCCTTCATGTTGA |
| AA seq | Len:819 aa MDSSFFLTTVAAAIGLLTLVRKLRLHQEDNREKDPSSSSPSSTLSPSIVPPPSSYRIWTHDVFPSFRGEDVRRNFLSHIQ MEFERKGITPFIDNEIKRGESIGPELIRTIRGSKIAIILLSRNYASSKWCLDELVEIMKCREELGQTVMAVFYEVDPSDV KNLAGHFGRVFRKTCAGETKENIGRWRQALAKVATVAGYHSSNCKSVIGIKLDYYKIEEELDVSEKAFDGMSNLQFLQVN GYGAPLQLTRGLNYLSHKLRLLHWSHFPMSCFPCNVNLEFLVELIMIGSKLEKLWEGIKPLRSLKWMDLSDSVNLKELPN LSTATNLEKLYLRNCWSLIKLPCLPGKSMEELDIGGCSSLVQFPSFTGNAVNLLKLNLVSFPNLVELPSYVGNATNLENL NLSNCSHLVELPLSFGNLQKLQTLILKGCSKLENFPNNITLEFLNDLDLAGCSSLDLRGFSTIGNVVNLQTLNLSSLPQL LEVPSFIGNATNLEDLILSNCSNLVELPLFIGNLQKLKRLRLEGCSKLEVLPTNINLESLFELNLNDCSMLKRFPEISTN IRNLYLIGTAIEQVPPSIRSWSRLDELKMSYFENLKEFPHALERITCMCLTDTEIQELPPWVKKISRLSVFVLKGCRKLV TLPAISESIRYMDASDCKSLEILECSFHNQYLTLNFANCFKLSQEARNLIIQNSCRYAVLPGGQVPPHFTHRATGAGPLT IKLNEKPLPKYMIFKACILLVYKVDHDACSEENSMEVDVIYQNSNKKLYPALAEHLYIFRVEAEVTSSELFFEFKLKRDD VWKIGECGLVRDVEVPSC* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |