Names & Information
Knowledge of BnaA03G0077200NO:
| Gene Name | BnaA03G0077200NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC03g08650D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
| NT seq | Len:3522 nt ATGGCGAGCTCCTCCTCGTCCAAGTTCAAATCTTGCTCTAAGCCGCCCCAGGACCAAGTGTTCATCAACTTCCGGGGAGT GGAACTACGCTTCAACTTCGTTAGTCATCTCAACAAGGGCTTAAAAAGGAATGGCATCAATGCTTTTATAGACACAGATG AAGACATGGGCCAACATCTAAATGTTCTGCTAGAGAGAATCGAACGGTCGAAAGTTGCGCTAGCCATATTCTCCCCGAGG TACACGGAGTCAGATTGGTGTTTGAAGGAGCTTGCCAAGATGAGAGAAAGAATGGAGCAAGGCAAGCTCGTGGTGATTCC AATCTTTTACAAGGTGGAGCCTGCCACTGTTAAAAGGCAGAGAGGAGAGTTCGGTGACAAGTTCAGGGATCTGGTTGAGT GTCTCGATGAGGAGACCAAGAACAAATGGACAGAAGCTTTAAAGACTGTTTCCCAGTTGACCGGATTGGTCGTAGGCGAG AAAAGCGATGAAGACGATCTCATCTATAGAGTCGTCGAGAAGGTAACAAAAGCGTTGAACAACACTTCACGAGTTTCTCC CCCTTCATCAGAAGGTACTGATCTTTCACAGACAGTACACCCAAAAAAGGTTGAGAGCTCTTGTGGAATTGAATTACGTG TAAAGCAGCTAGAAGAAAAGTTAAGCTTTGGCTCTGAGGAAACTACCCGTACCATTGGTGTTGTTGGGACGCCTGGCATT GGTAAAAGCACTCTCGTTAAGAAGTTCTACGAGAAATCAAAGAACCGGTTCTTGAGTCATGTGTTTTTACCAGATGTCCA TCAAACTACAAAGGATTACGGCTTGAGTTACTTGCCTACAGTACTCTTGGAAGACTTACTCAAGGTCAAGAGTCCCAGGT TTGAGAATGTCCAGGCTGCACATGAAGGCTACAAGGATCAGCTACTCAGAACCAAAACACTTGTTGTTCTCGACAATGTC AGTGACAAGGAACAGATTCTTGCTATTCTCGGAAAACGTGACTGGATTAAACAAGGAAGCAAGATTGTCATTGCAACAAG TGATACGTCGTTGGTCCATAAATTGGTTGATGATATTTATGAAGTCCCTCGACTAAGCTATAAACACAGCTTACAACACT TTTGTCATTATGCCTTTGGTGGACAAAGTAATGATTCGAGTTTCTCGAATCTGTCCAAAGATTTTGTGCATTACACCAAA GGAAATCCACTAGCTCTCAAGGTATTGGGTGCTGAGCTTCTAGGGAAAGACGAGCCTGTCTGGTATTCAAAACTGGATGC TTTGAGCCAGTACCATAATGGACGAGAAAGAAGCTCTAGGAAGATGCTAGCACAAAGCTCCAGCGAGATGCTTCAAAGTG TCTGGAAACAAAGCTATGATGCACTTAACCAGCAACAGAAGGATACACTTCTTGACATAGCTTGCTTCAGGTCACTGGAC AAGGATTATGTAGCAAGTTTATTAGGTTCATATGGAGCAAGTTCCTTTGACGCTAGGATTGAGATAGAAGAACTCGTCCA CAAGTTCCTGATTACTATATCTGGGAGCAAAATAGATATGCACGATACGCTGCATATGTTTTGTAAGGAACTTGGTCAAG AAGCCACTGCAGCTGATGAAAAAGGGCGACGACGGTTATGGGACCATCACCTGATAACTGATGTGTTAGACAGCAATAAG GGAGCTTCTAAGATCAGGTCTATCTTCCTTGACTTGGCTGATGTTAAGATGAAGAGCCTCCACAGTCAAGCATTTGTCTC GATGATCGATATGCGGTACCTAAAAATCTACAACACCGATTGTCCTCAAGAATGTGACCGTGACATCACCTTAAACTTCC CGGAGGGACTCCAGCTCCCTTTGGAGGAGGTGCGATGTCTCCATTGGCTGAAGTTCCCGTTGAAAGAACTTCCACCAGAT TTCAACCCGCAGAATCTTGTGGACCTTAAGCTTCCTTACAGCGAGATTGAAAAGGTTTGGGAAGGTGACAAGGATGCATC TAAACTTAAATGGATCGACTTCAACCACTCAAGAAAGTTGAGCACTTTGTCGGGACTAGCTGAGGCTCGAAATCTTCAAG ACCTGAACCTTGAAGGCTGCACAGCATTGGACATGTTGCCCCAAGACATGGAAAATATGAAGCATCTTGTTTTCCTGAAC CTGAGAGGCTGCACAAGTCTTAAATGTCTTCCAGATATTAACTTGATGTCTCTCCAAATCCTCATCCTCACCAACTGCTC AAAATTTAAGGTGTTTCGGGTAGTTTCAGAAAAGCTAGAAGCAATATACTTAGACGGTGCTGCGATAAAAGAGCTTCCTT CTGACATTGGGAAGCTCCAGAGACTTGCCTTATTTAACATGAAAGGCTGCAAGAAGCTGAAAACACTCCCTGACAGCATT GGCGAACTTAAAGCTCTTCAAGAACTGATACTTTCCGACTGTTCAAAGCTCAAAAGTTTTCCAAAAGTTGGGGCCAACAT GGAGCGTCTGGAGATTTTACTTCTAGATGGAACAGCTATCAAAGAGTTGCCAAATATATTCTCACTGCGGCGCATATGTT TAAGCAAAAATGAAAAGATATGTCGCCTCCCGGAGAACATCAGCCAATTTTCTCGACTCAAATGGCTTGATATGAAGTAC TGTAACAGCGTCACACATATTCCTAAGCTACCACCAAACCTTCAATGCTTAGACGCACATGGATGTAACTCACTGAGAAC AATTGCGCAACCACTTGCACACGCTATGGCCACAGAGAGTATTCATTCCACTTTCATTTTCACGAACTGCAACGGATTGG AACAACCTGCAAAGGAGGAGATAGCATCCTTTGCTCAAAGGAAGTGTCAGCTACTACCAAGTGCACTTAAACTCTGCAAT AAGGATCTTGTACCGGAGATTTTGTTCAGCACTTGCTTTCCTGGAGCTGATATACCTTCATGGTCTAGTCACGAAGCAAT TGGATCTAAGGTGCAGTTTGAATCTCCCCAGCACTGGAATTACAATAAGCTCTCTGGGATAGCCCTATGCGCCGTCATCT CATTCCAAAACTGCCAAGATCAAACAAGAACAGAACAAGAGCAGACCAACTACTTGTCAGCGAAATTTACTTGTAAAGGC ATGACAGGTGAGGAGCCTTGCACCCAAGTTACTTGGAAAGTTGGAAGCTGGAGTGAGCAAGACGCAATCGGGTCAGATCA TGTTTTTATTGGCTACACCAACTGCGTCCACCTCATAAAACACCTTGAAGACAAGCATTCTAGCCAATGTGCTCCTGTTG TGGCGTTCCTAGAGTTTAGCGTGAACGATGAAAATACTAGTAGGGAAGCTAGGTTTGAGGTGTTGAAATCCGGTCTCAGT TTTGTGTTTGAGCCTGATGCAAACTCTGTTGCATGTCCAAGGGTTAGCGACATCACATGTGAAGTAACAGCCATTACCGA AATTCTAATGACCAATTGTTGTCTCACGGATCAAGCCAACGGTGTAGGGAATCACCAAAAGGCAAATGGCAAGACCAAGT GA |
| AA seq | Len:1174 aa MASSSSSKFKSCSKPPQDQVFINFRGVELRFNFVSHLNKGLKRNGINAFIDTDEDMGQHLNVLLERIERSKVALAIFSPR YTESDWCLKELAKMRERMEQGKLVVIPIFYKVEPATVKRQRGEFGDKFRDLVECLDEETKNKWTEALKTVSQLTGLVVGE KSDEDDLIYRVVEKVTKALNNTSRVSPPSSEGTDLSQTVHPKKVESSCGIELRVKQLEEKLSFGSEETTRTIGVVGTPGI GKSTLVKKFYEKSKNRFLSHVFLPDVHQTTKDYGLSYLPTVLLEDLLKVKSPRFENVQAAHEGYKDQLLRTKTLVVLDNV SDKEQILAILGKRDWIKQGSKIVIATSDTSLVHKLVDDIYEVPRLSYKHSLQHFCHYAFGGQSNDSSFSNLSKDFVHYTK GNPLALKVLGAELLGKDEPVWYSKLDALSQYHNGRERSSRKMLAQSSSEMLQSVWKQSYDALNQQQKDTLLDIACFRSLD KDYVASLLGSYGASSFDARIEIEELVHKFLITISGSKIDMHDTLHMFCKELGQEATAADEKGRRRLWDHHLITDVLDSNK GASKIRSIFLDLADVKMKSLHSQAFVSMIDMRYLKIYNTDCPQECDRDITLNFPEGLQLPLEEVRCLHWLKFPLKELPPD FNPQNLVDLKLPYSEIEKVWEGDKDASKLKWIDFNHSRKLSTLSGLAEARNLQDLNLEGCTALDMLPQDMENMKHLVFLN LRGCTSLKCLPDINLMSLQILILTNCSKFKVFRVVSEKLEAIYLDGAAIKELPSDIGKLQRLALFNMKGCKKLKTLPDSI GELKALQELILSDCSKLKSFPKVGANMERLEILLLDGTAIKELPNIFSLRRICLSKNEKICRLPENISQFSRLKWLDMKY CNSVTHIPKLPPNLQCLDAHGCNSLRTIAQPLAHAMATESIHSTFIFTNCNGLEQPAKEEIASFAQRKCQLLPSALKLCN KDLVPEILFSTCFPGADIPSWSSHEAIGSKVQFESPQHWNYNKLSGIALCAVISFQNCQDQTRTEQEQTNYLSAKFTCKG MTGEEPCTQVTWKVGSWSEQDAIGSDHVFIGYTNCVHLIKHLEDKHSSQCAPVVAFLEFSVNDENTSREARFEVLKSGLS FVFEPDANSVACPRVSDITCEVTAITEILMTNCCLTDQANGVGNHQKANGKTK* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |