Names & Information
Knowledge of BnaA03G0085600QU:
| Gene Name | BnaA03G0085600QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 isoform X1 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:3321 nt ATGGAGTTCGAAAGAAAAGGAATCACACCATTCATTGATAATGAAATTAAAAGAGGAGATGATATTGGTCCGGAGCTCAT CAGGGCCATTAGAGGATCTAAGATTGCAATTATCTTGCTCTCTAAGAACTATGCCTCCTCAAAATGGTGTCTTGATGAAC TGGTGGAGATTATGAAGTGCAGAGAAGAGTTGGGTCAAACTGTAATGGCTATTTTCTACAAAGTGGATCCATCTGATGTG AAAAAGCTAGCAGGAGATTTTGGGAGAGTCTTTAAAAAAACTTGTGCTGGCAGAACGAAGGAAAACATTGAGAGATGGAG ACAAGCTTTGGCAAAAGTGGCCACAGTCGCTGGCTATCATTCAAGCAACTGGGATAATGAAGCGGCCATGATCAAGAAAA TCGCCACTGATATCTCGGACATGCTGAATAATTTCACACCATCAAATGATTTTGACGGGTTAGTTGGGATGGGAGCTCAT TTGGAAAAGATGGAGCCATTGTTATGCCTAGGCTCAGATGAGGTGAGGATGATTGGGATTTGGGGTCCTCCTGGGATTGG GAAGACCACAATCGCTAGAGTCGCATACAGCAAACTCTCCAACAATTTTCAACTGAGTGTCTTTATGGATGATCTCAAAG CAAACTATACAAGACTGTGTTCAGATGACTACAGCTTAAAGTTGCAACTACAACAACAATTTATGTCTCAGATAACCAAC CAAAAGGATATGGTGGTTTCTCATTTGGGAGTTGCGTCAAATAGGTTGAAGGACAAGAAAGTTCTTGTTGTTCTTGATGG TGTGGACCAGTCAGTACAACTAGAAGCGATGGCAAAAGAGACTTGGTGGTTTGGTCCTGGGAGTCGGATTATAATCACAG CACAAGATCAGAAACTTTTTAGAGCACATGGGGTCAACCTTATTTACAAGGTGGATTTTCCAACAAAGGATGAGGCTCTT CAAATATTTTGTACGTATTCTTTTGGTCAAAAGTCCCCTAAAGATGGTTTTGAGGAGCTTGCTCGAGAAGTTACAAGACT TGCTGGAGAACTCCCTTTGGGGCTAAGGGTAATGGGTTCATACTTTCGAGGAATGTCCAAGCAAGAGTGGAGAAATTCGC TACCAAGATTGAGGACTAGCCTTGACACTGATATTCGAAGCATTTTGAAGTTCAGCTATGATGCTTTAGATGATGAAGAT AAAGATTTATTTCTTCATATAGCCTGCTTCTTCAACTCTCAAGAGATTCGCAAAGTGGAAGAGCATCTTGCAAAGAAATT CTTGGAAGTGAGGCAGAGACTTAACGTCTTAGCTGAGAAATCTCTCATATCTATCGACCGGGGAGTTATAAGGATGCATA GTTTGCTAGAAAAACTTGGTAGAGAAATAGTTTGTAAACAATCTATTCATGAGCCTAGACTACGCCAGTTTCTGTGGGAG GAAACAGAGATTTTTGAAGTACTGACTGGTGATACAACAGGTGGTAGTAAAAGTGTCATAGGCATAAAGTTAGAATACAG TACAGAGGGTGAAAAAATAGAAATAAGTGAGAAAGCCTTTGAAGGGATGTCAAATCTCCAATTCTTAAAAGTCTCTGGTT ATAGCCATCCATTGCAATTAACTCGAGGTCTGAACTATATATCTCATAAACTTCGATTTCTAGAGTGGACTCAATTTCCA ATGACATGTTTACCTTCCATCCTGAACTTGGAGTTCCTTGTCGAACTAATCATGCATACAAGCAAGCTTGAGAAGTTGTG GGAAGGAACTAAACCGCTTCCATGTCTCAAGTGGATGAATTTGAGATATTCTGAAAATTTGAAGGAGCTTCCTGATCTCT CAACTGCCACTAACCTTGAATTGGATCTTCGTAATTGCTCGAGTCTAATCAAACTCCCTTCCTTGAATGGAAATAGTTTG GAGAAATTATATATTGGTGGCTGCTCAAGTCTTGTGGAGTTTCCCTCCTTTATTGAGAATGCCGTTAGTCTCCGAAAGTT GGATCTTAGAAGTTACCCAAATATATTGGAGCTCCCTTCTTATGTTGGGAATGCCACCAACTTGGAGAAGTTGGATCTTA GTAATTGCTTAGATCTGGTGGAACTTCCTCTCTCTCTTGGAAACCTTCAGAAGTTGAAGAAACTGGTATTAACAGGATGT AGTAAGCTAGAGGTTTTTCCCACCAACATCAACTTGGAGTCTTTGGAAAGACTTGATCTCGCTGGATGCTCAAGTCTCGA TCTCGGTGGATGCTCCACTATCGGAAATGTCCCCAGTCTCCGAATGTTGAACTTAAGAAGTCTACCACAATTGTTGGATC TCCCTTCCTTTATTGGCAATGCCATTAATCTATATTTATTGGACCTTAGTGGTTGCTCAAATCTGGTGGAACTTCCTGTT TTCATTGGAAACCTTCAGAAGTTGTCTGTGCTAGAATTACAAGGATGCTCTAAGCTAGAGTTTCTTCCCACCAACATCAA CTTGGAATCTTTGAGAAGGCTTAATCTCCGTGATTGCTCCATGTTGAAATGTTTTCCTCAGATCTCCACAAACATTAGAC ATCTCGACCTCACAGGAACTGCGATAGAACAAGTGCCTCCGTCGATCAGGTCATGGCCTCGTCTTAAGGAGTTGAAGATG TCATACTTTGAAAACCTCAAGGAATTCCCTCATGCTCTTGAAAGAATCACAGAACTGTGCTTGACCGACACAGATATACA AGAGCTTCCTCCGTGGGTCAAGCAAATCTCTTGTCTGAATAGTTTTGTGCTCAAGGGATGCCGAAAGTTGGTATCGATCC CGCCAATTTCGGATTCCATCCGTTTCCTGGATGCAAGTGACTGCGAGTCCCTGGAGATACTAGAGTGCTCCTTCCACAAT AAAATCATTACGCTCAACTTTGCCAACTGCTTCAAACTGAATCAAGAGGCGAGAGACCTCATCATCCAGAATAGTCGAGA GGCAGTCTTACCAGGTGGACAAGTGCCTGCATACTTCACTCACCGAGCTACTGGTGGAGGTCCATTATCAATCAAGTTGA ATGAAAAGGCTCTTCCAATATCCTTGAGATTTAAAGCCTGCATCTTGCTGGTTGATAAAGGTGACCATGACGCTTGCTCT AAAGAGAAATCCACAGAAGTGTTTGCTATGTATAAAAATCGCCATCATAGGTTATATCCAGCTCTAGCACAGCATCTGTA CACATTTGAAGTCGAAAAGGAGGTGACTTCCAGCGAGCTTCTCTTTGAGTTCAAGCTGGAAAGCGATGACGTTTGGAAGA TAGGAGAATGCGGGATAGTACAACACTTGGAGGTCCCTTGA |
| AA seq | Len:1107 aa MEFERKGITPFIDNEIKRGDDIGPELIRAIRGSKIAIILLSKNYASSKWCLDELVEIMKCREELGQTVMAIFYKVDPSDV KKLAGDFGRVFKKTCAGRTKENIERWRQALAKVATVAGYHSSNWDNEAAMIKKIATDISDMLNNFTPSNDFDGLVGMGAH LEKMEPLLCLGSDEVRMIGIWGPPGIGKTTIARVAYSKLSNNFQLSVFMDDLKANYTRLCSDDYSLKLQLQQQFMSQITN QKDMVVSHLGVASNRLKDKKVLVVLDGVDQSVQLEAMAKETWWFGPGSRIIITAQDQKLFRAHGVNLIYKVDFPTKDEAL QIFCTYSFGQKSPKDGFEELAREVTRLAGELPLGLRVMGSYFRGMSKQEWRNSLPRLRTSLDTDIRSILKFSYDALDDED KDLFLHIACFFNSQEIRKVEEHLAKKFLEVRQRLNVLAEKSLISIDRGVIRMHSLLEKLGREIVCKQSIHEPRLRQFLWE ETEIFEVLTGDTTGGSKSVIGIKLEYSTEGEKIEISEKAFEGMSNLQFLKVSGYSHPLQLTRGLNYISHKLRFLEWTQFP MTCLPSILNLEFLVELIMHTSKLEKLWEGTKPLPCLKWMNLRYSENLKELPDLSTATNLELDLRNCSSLIKLPSLNGNSL EKLYIGGCSSLVEFPSFIENAVSLRKLDLRSYPNILELPSYVGNATNLEKLDLSNCLDLVELPLSLGNLQKLKKLVLTGC SKLEVFPTNINLESLERLDLAGCSSLDLGGCSTIGNVPSLRMLNLRSLPQLLDLPSFIGNAINLYLLDLSGCSNLVELPV FIGNLQKLSVLELQGCSKLEFLPTNINLESLRRLNLRDCSMLKCFPQISTNIRHLDLTGTAIEQVPPSIRSWPRLKELKM SYFENLKEFPHALERITELCLTDTDIQELPPWVKQISCLNSFVLKGCRKLVSIPPISDSIRFLDASDCESLEILECSFHN KIITLNFANCFKLNQEARDLIIQNSREAVLPGGQVPAYFTHRATGGGPLSIKLNEKALPISLRFKACILLVDKGDHDACS KEKSTEVFAMYKNRHHRLYPALAQHLYTFEVEKEVTSSELLFEFKLESDDVWKIGECGIVQHLEVP* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |