Names & Information
Knowledge of BnaA03G0090500NO:
| Gene Name | BnaA03G0090500NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 isoform X1 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:3597 nt ATGGATTCTTCTTTTTTCCTTACCACTGTTGCTGCTGCAATAGGTCTCTTTATCCTTACCACTGTTGCTGTTGCAATAGG TCTCTTTACTCTTTTGAGGAAACTTAGATTACATCAAGATGATAACAGAGAAAAGGATTATTCTTCTTCATCACGTTCAT CTTCTTTGTCTCCTTCACCAGTTCCTCCACCTTCTTCTTCTCGCATCTGGACGCATCATGTCTTTCCCAGCTTCCGCGGG GAAGATGTCCGCAAAGACTTTCTTAGCCACATTCAGATGGAGTTCGAAAGAAAAGGAATCACACCATTCATTGATAATGA AATTAAAAGAGGAGATGATATTGGTCCGGAGCTCATCAGGGCCATTAGAGGATCTAAGATTGCAATTATCTTGCTCTCTA GGAACTATGCCTCCTCAAAATGGTGTCTTGATGAACTGGTGGAGATTATGAAGTGCAGAGAAGAGTTGGGTCAAACTGTA ATGGCTATTTTCTACAAAGTGGATCCATCTGATGTGAAAAAGCTAGCAGGAGATTTTGGGAGAGTCTTTAAAAAAACTTG TGCTGGTAGAACGAAGGAAAACATTGAGAGATGGAGACAAGCTTTGGCAAAAGTGGCCACAATCGCTGGCTATCATTCAA GCAACTGGGATAATGAAGCGGCCATGATCAAGAAAATCGCCACTGATATCTCGGACATGCTGAATAATTTCACACCATCA AATGATTTTGACGGGTTAGTTGGGATGGGAGCTCATTTGGAAAAGATGGAGCCATTGTTATGCCTAGGCTCAGATGAGGT GAGGATGATTGGGATTTGGGGTCCTCCTGGGATTGGGAAGACCACAATCGCTAGAGTCGCATACAGCAAACTCTCCAACA ATTTTCAACTGAGTGTCTTTATGGATGATCTCAAAGCAAACTATACAAGACTGTGTTCAGATGACTACAGCTTAAAGTTG CAACTACAACAACAATTTATGTCTCAGATAACCAACCAAAAGGATATGGTGGTTTCTCATTTGGGAGTTGCGTCAAATAG GTTGAAGGACAAGAAAGTTCTTGTTGTTCTTGATGGTGTGGACCAGTCAGTACAACTAGAAGCGATGGCAAAAGAGACTT GGTGGTTTGGTCCTGGGAGTCGGATTATAATCACAGCACAAGATCAGAAACTTTTTAGAGCACATGGGGTCAACCTTATT TACAAGGTGGATTTTCCAACAAAGGACGAGGCTCTTCAAATATTTTGTACGTATTCTTTTGGTCAAAAGTCCCCTAAAGA TGGTTTTGAGGAGCTTGCTCGAGAAGTTACAAGACTTGCTGGTGAACTCCCTTTGGGGCTAAGGGTTATGGGTTCATACT TTCGAGGAATGTCCAAGCAAGAGTGGACTAATTCGCTACCAAGATTGAAGACTAGCCTTGATTCTGATATTCGAAGCATT TTGAAGTTCAGCTATGATGCTTTAGATGATGAAGATAAAGATTTATTTCTTCATATAGCCTGCTTCTTCAACTCTCAAGA GATTCACAAAGTGGAAGAGCATCTTGCAAAGAAATTCTTGGAAGTGAGGCAAAGACTTAACGTCTTAGCTGAGAAATCTC TCATATCTATCGACTCGGGAGTTATAAAGATGCATAGTTTGCTAGAAAAACTTGGTAGAGAAATAGTTTGTAAACAATCT ATTCATGAGCCTAGACTACGCCAGTTTCTGTGGGAGGAAACAGAGATTTTTGAAGTACTGACTGGTGATACAACAGGTGG TAGTAAAAGTGTCATAGGCATAAAGTTAGAATACAGTACAGAGGGTGAAAAAATAGAAATAAGTGAGAAAGCCTTTGAAG GGATGTCAAATCTCCAATTCTTAAAAGTCTCTGGTTATAGCGATACATTGCAATTAGCTCGAGGTCTGAACTATATCTCT CATAAACTTCGATTTCTAGAGTGGACTTATTTTCCAATGACATGTTTACCTTCTATCCTGAACTTGGAGTTCCTTGTCGA ACTAATCATGCATACAAGCAAGCTTGAGAAGTTGTGGGAAGGAACTAAACCGCTTCCATGTCTCAAGTGGATGAATTTGA GTTGTTCTGAAAATTTGAAGGAGCTTCCTGATCTCTCAACTGCCACTAACCTTGAATTGGATCTTCGTAATTGCTCGAGT CTAATCAAACTCCCTTCCTTGAATGGAAATAGTTTGGAGAAATTATATATTGGTGGCTGCTCAAGTCTTGTGGAGTTTCC CTCCTTTATTGAGAATGCCGTTAGTCTCCGAAAGTTGGATCTTAGAAGTTACCCAAATATATTGGAGCTCCCTTCTTATG TTGGGAATGCCACCAACTTGGAGAAGTTGGATCTTAGTAATTGCTTAGATCTGGTGGAACTTCCTCTCTCTCTTGGAAAC CTTCAGAAATTGAAGAAACTGGTATTAAAAGGATGTAGTAAGCTAGAGGTTTTTCCCACCAACTTCAACTTGGAGTCTTT GGAAATACTTTGTCTCGCTGGATGCTCAAGTCTCGATCTCGGTGGATGCTCCACTATCGGAAATGTCCCCAGTCTCCGAA TGTTGAACTTAAGAAGTCTACCACAATTGTTGGATCTCCCTTCCTTTATTGGCAATGCCATTAATCTAGATTACTTGGAC CTTAGTGGTTGCTCAAATCTGGTGGAACTTCCTGTTTTCATTGGAAACCTTCAGAAGTTGTCTATGCTAGAATTACAAGG ATGCTCTAAGCTAGAGTTTCTTCCCACCAACATCAACTTGGAATCTTTGAGTTCGCTTAATCTCCGTGATTGCTCCATGT TGAAATGTTTTCCTCAGATCTCCACAAACATTAGAGATCTCGACCTCAGAGGAACTGCGATAGAACAAGTGCCTCCGTCG ATCAGGTCATGGCCTCGTCTTAAGGAGTTGAAGATGTCATACTTTGAAAACCTCAAGGAATTCCCTCATGCTCTTGAAAG AATCACAGAACTGTGCTTGACCGACACAGATATACAAGAGCTTCCTCCGTGGGTCAAGCAAATCTCTTGTCTGAATAGTT TTGTGCTCAAGGGATGCCGAAAGTTGGTATCGATCCCGCCAATTTCGGATTCCATCCGTTTCCTGGATGCAAGTGACTGC GAGTCCCTGGAGATACTAGAGTGCTCCTTCCACAATAAAATCATTACGCTCAACTTTGCCAACTGCTTCAAACTGAATCA AGAGGCGAGAGACCTCATCATCCAGAATAGTCGAGAGGCAGTCTTACCAGGTGGACAAGTGCCTGCATACTTCACTCACC GAGCTACTGGTGGAGGTCCATTATCAATCAAGTTGAATGAAAAGGCTCTTCCAATATCCTTGAGATTTAAAGCCTGCATC TTGCTGGTTGATAAAGGTGACCATGACGCTTGCTCTAAAGAGAAATCCACAGAAGTGTTTGCTATGTATAAAAATCGCCA TCATAGGTTATATCCAGCTCTAGCACAGCATCTGTACACATTTGAAGTCGAAAAGGAGGTGACTTCCAGCGAGCTTCTCT TTGAGTTCAAGCTGGAAAGCGATGACGTTTGGAAGATAGGAGAATGCGGGATAGTACAACACTTGGAGGTCCCTTGA |
| AA seq | Len:1199 aa MDSSFFLTTVAAAIGLFILTTVAVAIGLFTLLRKLRLHQDDNREKDYSSSSRSSSLSPSPVPPPSSSRIWTHHVFPSFRG EDVRKDFLSHIQMEFERKGITPFIDNEIKRGDDIGPELIRAIRGSKIAIILLSRNYASSKWCLDELVEIMKCREELGQTV MAIFYKVDPSDVKKLAGDFGRVFKKTCAGRTKENIERWRQALAKVATIAGYHSSNWDNEAAMIKKIATDISDMLNNFTPS NDFDGLVGMGAHLEKMEPLLCLGSDEVRMIGIWGPPGIGKTTIARVAYSKLSNNFQLSVFMDDLKANYTRLCSDDYSLKL QLQQQFMSQITNQKDMVVSHLGVASNRLKDKKVLVVLDGVDQSVQLEAMAKETWWFGPGSRIIITAQDQKLFRAHGVNLI YKVDFPTKDEALQIFCTYSFGQKSPKDGFEELAREVTRLAGELPLGLRVMGSYFRGMSKQEWTNSLPRLKTSLDSDIRSI LKFSYDALDDEDKDLFLHIACFFNSQEIHKVEEHLAKKFLEVRQRLNVLAEKSLISIDSGVIKMHSLLEKLGREIVCKQS IHEPRLRQFLWEETEIFEVLTGDTTGGSKSVIGIKLEYSTEGEKIEISEKAFEGMSNLQFLKVSGYSDTLQLARGLNYIS HKLRFLEWTYFPMTCLPSILNLEFLVELIMHTSKLEKLWEGTKPLPCLKWMNLSCSENLKELPDLSTATNLELDLRNCSS LIKLPSLNGNSLEKLYIGGCSSLVEFPSFIENAVSLRKLDLRSYPNILELPSYVGNATNLEKLDLSNCLDLVELPLSLGN LQKLKKLVLKGCSKLEVFPTNFNLESLEILCLAGCSSLDLGGCSTIGNVPSLRMLNLRSLPQLLDLPSFIGNAINLDYLD LSGCSNLVELPVFIGNLQKLSMLELQGCSKLEFLPTNINLESLSSLNLRDCSMLKCFPQISTNIRDLDLRGTAIEQVPPS IRSWPRLKELKMSYFENLKEFPHALERITELCLTDTDIQELPPWVKQISCLNSFVLKGCRKLVSIPPISDSIRFLDASDC ESLEILECSFHNKIITLNFANCFKLNQEARDLIIQNSREAVLPGGQVPAYFTHRATGGGPLSIKLNEKALPISLRFKACI LLVDKGDHDACSKEKSTEVFAMYKNRHHRLYPALAQHLYTFEVEKEVTSSELLFEFKLESDDVWKIGECGIVQHLEVP* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |