Names & Information
Knowledge of BnaA03G0210400GG:
| Gene Name | BnaA03G0210400GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA03g24930D [Brassica napus] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1 |
| NT seq | Len:2793 nt ATGGATCATACCCAGGCCGATCCAAACTCGTTTGGGGCCAAAGATGATTATGAGAACATCTCCGTAAACAGCGTTTTGGA AGCGCGTTTCTCCGGTGGTAATCCTTCGGATCAACAAGACCAGAGACGGCTACAGATGTATGTTCCTCGTAAAAAACGTC CTAAGTATGGCAAAGCCCAGCGTAAGTACATAAAGACCACTGCGTCGAGTTTCATGAACCTCGTTCAGCAATTCACCGGG GATCCTAGCGCTGTTTCAGAGTCAAAAAGTTCTAACACAGGCGTTGTTGCAGAATCATCATCTTACTCTACATATTATGA TGTTGTAATCAGATACAGAAGAGGGGACATAGGGAACAATGATTTCATTAGCCATCTTCGTGCTGCGCTTTGCCGGAGAG GGCTTTCTGTTGATGAAGACTTTGATGAAGTGGATACAGTTCCAGAATGTAGGGTTTTGATCATATTCTTAACCAGCACA TACTTCTCTTCTACCCTACTAAACATTATTGAAGACCAACGGGGAGAGTATCAAGCAGTTTATCCTATTTTTTACGGTCT TTCACCATCTGATTTGATCAGTAATAGCAAGGTTTGTGATATATTTTTTCACCAAGATGAGGCAAAAAGGTGGCAGGCTG CTATGAAGGAAATAACTCAGATGCCTGGCTACACATTGACAGATAACTCCGAGTGTGATCTCATAGATGAGATTGTCAGA GATGCTTTGGCGGTTGTCTACTCCAGTTACAAGGTCACCATGGTTGGGAGGGATATGCAGATAAAGGAAATTTTGTCACT GCTATGCATTGAGTCTCCAGATGTTCGCAGCATAGGTATATGGGGTACAGTTGGTATAGGAAAAACAGCAATTGTTGAAG AGATCTTTCGCATACTTTCTGCCCAATATGAGACTTGTGTCTTCCTTAAGGACCTTCATCAAGAAGTAGAGGTAAAAGGG CACAATGCTGTGGGGGAGGACTTTTTGTGTAAACTTTTAGAGGTAGAACCAGATGTCTTACGTACTTCCAACATTAAAAC AAGTTTCTTGAAGAGTAGGCTTGAGCGTAAAAGGGTCCTCGTTATTCTCGACGATGTGAATGACTTGAGAGATGTTCAAA ATTTTATGGACAACCTTAACTATTTTGGTTCAGGAAGCAGAATAATCATAACCTCTAGAAACAGACATGTTTTTGTACTT GGCAAAATCAATCATGTCTATGAGGTCAAGCCATTAGATATTTCGACGTCTCTACAACTTCTCGATCGTGGAACACTTCC GAATGTTTTGTCACCTGAGGTTTATAGGAAACTGTCACTTGAGCTGATCAAATTTTCAAATGGAAATCCACAGGTTCTTC AGTTCTTGAGCAATAGAAAATGGAATCCGCTATCAGAACAAGTTCAAGAAACATCTCCCATTTACATTCCAGGTATATTT GAAGCAAGCTGCTGTGGGCTTGATGACAATGAGAGAAGTATATTTTTGGACATTGCATGTTTCTTTAAAAGGATGGATAA AGCCGACATTGCAATGTTGCTTGATAGTTGTGGTTTCTCTACACACATTGGGTTTAAAAGTCTTGTTGAGAAATCATTGT TAACCATATCACATAAGATGGTGGATATGCACCGATTTCTCCAGGCAACCGGTCAAGAAATTGTTCGCCAAGAATCAGTG GACATGCCTGGAGACCGGAGCAGGCTGTGCAATTCCAAAGATATTATGGACGTCTTCGTAGATAACACTGGCACATCAGC TATTGAGGGGATTTTCCTGGACATGTCGCAGCTGAAATTCGATGCAAGTCCCAGTATATTCGAGAAAATGTGTAACCTTA GACTGTTAAAATTCTATTGCTCCAAAGTGATAGAGAATCGTGGAGTGTCTTTACCTCAAGGTCTTGAATACTTGCCGAGT AAACTAAGGCTTCTGTACTGGGAATATTATCCTCTAAGCTCTTTGCCGCAATGTTTTGATCCGAAGAACCTCGTAGAGCT AAACATGCCATATAGTTGTGTGAAAAAACTTTGGAAAGGAAAAAAAGTAACGTTCAAGATTTCTTTAAGTTTGGAAAAGC TGAAAAAGATGAGACTTAGCTACTCCTACCAGTTAAAAAAACTCCCAAGACTTTCAACTGCGCCGAATCTCGAGCTTCTT GATCTTGAAGGTTGCAACAGTTTGGTGAGCATCAGCCAGTCTATCTGTTATCTTACAAAGCTTGTTTCTCTGAATCTGAA GGACTGCTCGAAGCTGGAGGGTATTCCATCTACGGTTGATTTAGAATCTCTTGAGGTTTTGAATATTTCTGGCTGCTCAA AGCTAATGAATTTTCCAGAGATTTCACCAAATGTGAAACAACTCTACATGGGTGGTACTATTGTCCAAGAAATACCGCCA TCGATCAAGAACCTGGTATTGCTTGAGATACTAGACCTGGAAAACAGCAAACACCTCGTGGATCTTCCAACCAGCATCTG CAAGTTGAAGCATCTTGAAACACTAAATCTCTCAGGCTGCTCAAGTCTTGAGCGGTTTCCAGACTTGTCTAGAAAGATGA AATGCTTAAAGTCTCTTGATTTAAGCAGGACGGCCATTAAAGAGTTACCTTCCTTTGTTTCATATCTGACTGCTCTTGAA GAACTGAGACTTATAGAGTGCCCGAACCTCGCAAGCTTGCCTGATGATGTGTGGAGCCTAAGATTCAAGGTTGAATTCCG CCAAATTGACACAGAGAAGTTTTCACGACTGTGGAATATATTTGGATGGCTTAAGAAAGTTCAGATCTCTTAG |
| AA seq | Len:931 aa MDHTQADPNSFGAKDDYENISVNSVLEARFSGGNPSDQQDQRRLQMYVPRKKRPKYGKAQRKYIKTTASSFMNLVQQFTG DPSAVSESKSSNTGVVAESSSYSTYYDVVIRYRRGDIGNNDFISHLRAALCRRGLSVDEDFDEVDTVPECRVLIIFLTST YFSSTLLNIIEDQRGEYQAVYPIFYGLSPSDLISNSKVCDIFFHQDEAKRWQAAMKEITQMPGYTLTDNSECDLIDEIVR DALAVVYSSYKVTMVGRDMQIKEILSLLCIESPDVRSIGIWGTVGIGKTAIVEEIFRILSAQYETCVFLKDLHQEVEVKG HNAVGEDFLCKLLEVEPDVLRTSNIKTSFLKSRLERKRVLVILDDVNDLRDVQNFMDNLNYFGSGSRIIITSRNRHVFVL GKINHVYEVKPLDISTSLQLLDRGTLPNVLSPEVYRKLSLELIKFSNGNPQVLQFLSNRKWNPLSEQVQETSPIYIPGIF EASCCGLDDNERSIFLDIACFFKRMDKADIAMLLDSCGFSTHIGFKSLVEKSLLTISHKMVDMHRFLQATGQEIVRQESV DMPGDRSRLCNSKDIMDVFVDNTGTSAIEGIFLDMSQLKFDASPSIFEKMCNLRLLKFYCSKVIENRGVSLPQGLEYLPS KLRLLYWEYYPLSSLPQCFDPKNLVELNMPYSCVKKLWKGKKVTFKISLSLEKLKKMRLSYSYQLKKLPRLSTAPNLELL DLEGCNSLVSISQSICYLTKLVSLNLKDCSKLEGIPSTVDLESLEVLNISGCSKLMNFPEISPNVKQLYMGGTIVQEIPP SIKNLVLLEILDLENSKHLVDLPTSICKLKHLETLNLSGCSSLERFPDLSRKMKCLKSLDLSRTAIKELPSFVSYLTALE ELRLIECPNLASLPDDVWSLRFKVEFRQIDTEKFSRLWNIFGWLKKVQIS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | VQ motif |
| KEGG | hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A) |