Names & Information
Knowledge of BnaA03G0255700NO:
| Gene Name | BnaA03G0255700NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable WRKY transcription factor 19 [Brassica rapa] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1 |
| NT seq | Len:3675 nt ATGGAAACATCGGAAAATCCCGCCGGTGGAAAATCAGCCGCCGATCAAATAAAGAAGGATCTGACAGTCCAGAACACTAG TCTTAGCTCTTCATCTCTCAGTGACACCCCGGAATTAAAAAAACCGCGTACCCTAACCGAATCGCCGTCATGGGAGGACT TTGATAATCGATTGCTTCAAGAGACTCAGCGTCTGGAGTTCAAGCTTCGTTTCATAAACTCGCCGCGGCCGGTTGTATTC ACGTATTCTAATATCAAGGCTAAGGACGGTTCTTCGTTGGCAGTTGAGCTCGTCAAAGTAGCCACGGACAGGAGAGTTAC TTCGGGCCCGCTATCGTCCTCTCAGATTGAGATCGTGGCGCTGGACGCGGGGTTCACGGCGGGAAGCTGGACCTTGGAAG AGTTCAATCGGAAGATTGTCATGCCGCGGGAAGATAAACGACTGTTACTTACCGGAGATCTGATCCTGACGCTTAAGGAC GGGGTCGGAGTGATCGAAGATGTATCTTTCACCGACGCCTCAAGCGGGTTGGTGAGCCAAAAGTACCGATTAGGGGCTAA ACCGATCAAGGGAGGATTTTTGGAGGCGAGAAGTGAAGCCTTTGTATGTCGATACCATCCAAGGGAAAATATTGATACTG TAGCAGTTTATGGGTTTGAAAAGCATTATCCTCCCTATCCGCAGAGTGAGGTCTGGAGGCTGGAGGGAATCCCAAAAAAC GGGGTTGAAGCATCGCTTTTGGCGGAAGACGATATTCATACCGTCAAAGACATTCGCCGTCGTATTGCAATAGATCCAGA CGCCTTACACCAGATACTTGAGGAATGTCTGTCAAAGGAAACTCTGGACACGATTGTATCCCATGCAATGCATTGCGTGT TGGATGGCGACAAGTTTTATGCCTACGAAGTGAAAGACCAGGGAGTATTTCTTCTGTTCAACTCTTTTTACGAGTTAGTA CAAGTGTCGTTCGATGGAGTCACCTCACTAAACTGCCATCAGTTGACTTCCAACCAAAAGGAACTTATTAACCATATGAA GCCTGAAGCTTATAAAAATGTTGAATTGTTTGTCCCGGTGTATAGAGCGGACTCTCTGGATCATAATACATTGTGGCAGA GCAACTGTCTAGCACCAGAGTTTTCAGCATTTGGAAGTGATGACTCTGATATATATCAAATTCGTCCCACAGACCCACCA TGTGTTTCACTCGACAAGTATGATGTCGTCATCAGATACGATGAATCAGAGATGAGCAATGGTTTCATCAGCCATCTCCA TGCTGCCCTCTGCCAGAAAGAGATTTCAGTCGCACGAGCTTCCCTATCCAAACCAGTGGACGTAGTTCCAAAATGTAGGG TTATGATCACATTCTTAAACTATAAGTGTGATTCTTATGGCCTCCTTGAATTTAGTGAACGCCTTCTAAAGAAGGAGTTA CAGGCTTCTCAGATTTTTTACAGACTGACACTACGTCATTCGATCGATGAAAGGAAGAAACTTGAGAGATTTTCCTTCCA ATACCAGAAAAGAATGTGGTGGAATGTTTTGCAAAAAGTAGCTCAGGAGCCCGACGAAATAGTAATAGCCATGTCTGAGT CTGAGCTTATGCGTAAGATTGTCAGAGATGTTTCTAAGTTGCTTTGTGACAATGATAAGGAGAAGATGATTGGTATGGAT ACGCAAGTAGATGAGGTCTTGTCGCTACTACGCATTGAGTCCCTAGATGTTCGCGGCATAGGTATATGGGGCACGGCTGG TATAGGAAAGACAGCCATTGCTGAAAAAATCTTTCGCAGAATCTCTGTCCAATACAAAACTTGCGTCTTCCTGAAGAACC TTCATGAACAAGTAGAAGAAAAGGGGCAGGTTGCTATGAGGGAGGAATTTTTGTCTAAAATCTTAGAGGTGGAAGCATCA CTGTTGCGGATTTTCGACATTAACAAGTCTTTCTTGAGGAGCAAGCTTCGGTGTAAGAAGGTTCTTGTTGTTCTTGATGA TGTAAATGATTGTAAGGATATTGAAACCTTTCTGGGGGATCTAAAATATTTGGGTGGAGGAAGCAGAATAATCATAACCT CTAGAAATAGGCGAGTGTTCGTGCAGACTGAAATGGATCATATCTACGAGGTCAAGCCATTAGACATTTCCTCGTCTCTG CGATTTCTTGATGATGGTACATCAATGACATCAGCTAATTACAGGAAACAGTCACTTGAGCTAGTCATATATGCAAATGG AAATCCAGAAGTTCTTCATTATATGAAGAGCAGATTCCAAAAAGAATTTGACCAGCTATCACAAGAAGTTCTGCAGACCG CTCCCATCTGCATTCCACGTATATTGAGGAGCTGTTACGGACTTGACGAAAATGAGATGAATATACTTTTGGACATTGCA TGTTTCTTTCGAAAGATGGATAGAGACGGCGTTGCAATGTTGCTCGATGGCTGTGGTTTCTTTGCACATGTTGGATTTAG AAACTTGTTTGACAAGTCGCTGTTAACCATATCACACAACTTACTGAACATGCACAGGTTTATCCAGGCTACTGGTCGAG AGATTGTTCGCCAGGAGTCAGGTAACGAACCAGGAAAGCGCAGTAGGTTGTGGAATGCAGAAGAAATTATGGATGTATTC TTAAATGATACTGGTACATCAGCTATTGAGGGTATTTTCCTGGACATCCCGAGAAGGAAATTTGATGCAAATCCCAATAT ATTTGAGAAAATGCGGAACCTTAGACTGCTAAAGTTTTATTGCTCTGAAGTGATAAACAACGTTGGAGTATCTTTACCTC ATGGTCTGGAATATTTGCCAGGCAAGCTAAGGCTTCTCCATTGGGAGTACTATCCTTTGAGTTCCTTGCCGCAGAGTTTT GATCCAAAGAACCTTCTAGAGCTTAACTTGCCAAATAGCTGTGCAAAGAAACTCTGGAAAGGAAAAAAGAGTCTGGAAAA GCTGAAAAAGATGAGACTTAGCTACTCCTGCCAGTTAACAAAAATCCCAAGATTTTCAAGTGCGCCAAATCTCGAGCTTC TTGATCTTGAAGGTTGTAACAGTTTGGTGAGCATCAGCCAGTCTATCTGTTATCTTACAAAGCTTGTTTATCTGAATCTG AAGGACTGCTCGAAGCTGGAAAGTATACCATCTACGGTTGTTTTAGAATCTCTTGAGGTTTTGAATATTTCTGGCTGCTC AAAGCTAATGAATTTTCCAGAGATTTCACCAAATGTGAAACAACTCTACATGGGTGGGACTATTATACAAGAAATACCGC CATCGATCAAGAACCTGGTATTGCTTGAGATACTAGACCTGGAAAACAGCAAACACCTCGTGAATCTTCCAACCAGCATC TGCAAGTTGAAGCATCTTGAAACACTAAATCTCTCAGGCTGCTCAAGCCTTGAGCGGTTTCCTGGCTTGTCTAGAAAGAT GAAATGCTTAAAGTCTCTTGATTTAAGCAGGACGGCCATTAAAGAGTTACATTCCTCTGTTTCATATCTGACTGCTCTTG AAGAACTGAGACTTACAGAGTGCCGGAACCTCGCAAGCTTGCCTGATGATGTGTGGAGCCTAAGATTCAAGGTTGAATTC CGCCAAATTGACACACAGAAGTTTTCACGACTGTGGAATAGATTAGGATGGCTTAAGAAAGTTCAGATTTCTTAG |
| AA seq | Len:1225 aa METSENPAGGKSAADQIKKDLTVQNTSLSSSSLSDTPELKKPRTLTESPSWEDFDNRLLQETQRLEFKLRFINSPRPVVF TYSNIKAKDGSSLAVELVKVATDRRVTSGPLSSSQIEIVALDAGFTAGSWTLEEFNRKIVMPREDKRLLLTGDLILTLKD GVGVIEDVSFTDASSGLVSQKYRLGAKPIKGGFLEARSEAFVCRYHPRENIDTVAVYGFEKHYPPYPQSEVWRLEGIPKN GVEASLLAEDDIHTVKDIRRRIAIDPDALHQILEECLSKETLDTIVSHAMHCVLDGDKFYAYEVKDQGVFLLFNSFYELV QVSFDGVTSLNCHQLTSNQKELINHMKPEAYKNVELFVPVYRADSLDHNTLWQSNCLAPEFSAFGSDDSDIYQIRPTDPP CVSLDKYDVVIRYDESEMSNGFISHLHAALCQKEISVARASLSKPVDVVPKCRVMITFLNYKCDSYGLLEFSERLLKKEL QASQIFYRLTLRHSIDERKKLERFSFQYQKRMWWNVLQKVAQEPDEIVIAMSESELMRKIVRDVSKLLCDNDKEKMIGMD TQVDEVLSLLRIESLDVRGIGIWGTAGIGKTAIAEKIFRRISVQYKTCVFLKNLHEQVEEKGQVAMREEFLSKILEVEAS LLRIFDINKSFLRSKLRCKKVLVVLDDVNDCKDIETFLGDLKYLGGGSRIIITSRNRRVFVQTEMDHIYEVKPLDISSSL RFLDDGTSMTSANYRKQSLELVIYANGNPEVLHYMKSRFQKEFDQLSQEVLQTAPICIPRILRSCYGLDENEMNILLDIA CFFRKMDRDGVAMLLDGCGFFAHVGFRNLFDKSLLTISHNLLNMHRFIQATGREIVRQESGNEPGKRSRLWNAEEIMDVF LNDTGTSAIEGIFLDIPRRKFDANPNIFEKMRNLRLLKFYCSEVINNVGVSLPHGLEYLPGKLRLLHWEYYPLSSLPQSF DPKNLLELNLPNSCAKKLWKGKKSLEKLKKMRLSYSCQLTKIPRFSSAPNLELLDLEGCNSLVSISQSICYLTKLVYLNL KDCSKLESIPSTVVLESLEVLNISGCSKLMNFPEISPNVKQLYMGGTIIQEIPPSIKNLVLLEILDLENSKHLVNLPTSI CKLKHLETLNLSGCSSLERFPGLSRKMKCLKSLDLSRTAIKELHSSVSYLTALEELRLTECRNLASLPDDVWSLRFKVEF RQIDTQKFSRLWNRLGWLKKVQIS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A) |