Names & Information
Knowledge of BnaA03G0293800NO:
| Gene Name | BnaA03G0293800NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 isoform X3 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:3333 nt ATGGCTTCTTCTTCTTCTTCTTCATCTCTGGCTCGAAGTTGGTTGTATCACGTCTTCCTGAGCTTTCGTGGTGAAGACGT GCGCAAAACCTTTCTTAGTCACGTTCTGGAAAAGCTCGAAAACAAGGGAATCAATGTTTTCATTGATAATGAGATCAAGC GAGGCGAATCTGTCGGTCCTGAGCTTGTTAAAGCGATCAGACATTCAAGGGTTGCAGTTGTATTGCTCTCCCGTAACTAT GCTTCTTCAAGCTGGTGTCTGGATGAGTTAGTGGCAATCATGAAGTGCAGGGAAGAGTTTGGTCAAACAGTGATGACCAT TTTCTACCAAGTGGATCCATCTGAAGTTAGGAAGCAAACCGGAGATTTCGGAAAAGCCTTTGATGAAACCTGTGTGGGGA AAACAGAAGAGGTGAAGCAAGCATGGAGGCAAGCTTTGAAAGATGTCGCTGGTATAGCTGGTTACGACTTTAACATCTGT GGCAATGAAGCCGATTTGATCAACAAAGTCGCCTCAGATGTCATGGTTGTGTTGGGTTTTACACCATCAAAAGACTTTGA TGACTTTGTTGGCATAGAAGCTCGTATCATGGAGATAAAATCGAAGTTGATCCTACAGTCAGAAGAAGTTAAGGTGATTG GGATTTTTGGTCCTACCGGGATTGGTAAGACGACCACTGCCAGAGTTTTATACAAACAACTCTCTACTGATTTTCAGTTC AGCACCTTTTTGGAGGATATCAGAGGAAGTTATAAGAAGCCTTGTGGTAACGACTATCAGTTGAAGTTGCATTTTCAGAA AAACTTGTTGTGTCAAATATTAAACCGAAAAAACATTGAGGTTCATCACTTAGGAGGTGCTCAAGAAATGCTGGGTGACA AAAAGGTGTTGCTTGTGCTTGATGAAGTGGATAACTGGTGGCAGCTAGAGGAAATGGCAAAGCAGCGTCGATGGGTTGGT CCCGGAAGTATTATTATCATTACAACCGAAGATAGAAAACTTCTCAAGGCATTCGGACTCGGGATTGATCATATGTACAA GATGAAATATCCAACTAGCGATGAGTCTCTGCAGATCTTCTGCCAACATGCTTTCGGTCAAAACTATCCAGATGATGGTT TTGAAAGTCTTGCTAGGGAAGTTACTTGGCTTGCTGGTGATCTACCTCTAGGCCTGAGAGTTATGGGATCATATCTACGA GGAATGTCCAGGGACGAGTGGATAGAGGCACTACCATGGCTCAGGTCTACCCTTGATAGAGAAATTGAATCAACTCTAAG ATTTAGCTACGAAGCTTTGAGAGACAATGAAAAAACTCTTTTTCTACATTTAGCATGTTTGTTTACTTGTTTCAAGGTTG ATAGCGTCAAAAGGTATTTTGCAAACAGTAGGTTGGAAGTCAACCATGGGCTTGAAGTCTTAGATCAAAAATCTCTTATA TCTACAGATTACGGATTCATATACATGCATAGATTACTGGAACAAATGGGTAGAGAAATTGTCAAGAAACAAGCTATGGA GAATCCGGCAGCACCAAAGTTCTTGACGGACACCAAGGAGATTTCTGATGTGCTTGATGAGGATACTGCTAGGGGAAATG TTGTAGGCATAATGTTGTGTACGAGCCAGAAAATGCAAATAAATAAGAGCGCTTTCCAAGGGATGAATAATCTCCAGTTT CTATACTTTGCCCCTGATACCACCACATTCACACTCGAGGGCCTCGATTGTCTTCCCGACAAACTCATATTGCTACATTG GCCAGAGTGTCCATTGAGAGTTTGGCCTTCCAAGTTCTCTGGCAAGTTTCTTGTTGAACTAATCATGCCATGTAGCGAAT TCGAGTTGCTTTGGGAGGGAATTAAACCTCTCCCATGCCTCAAGAAGTTGAATTTGAGTTCCTCTCAGAATCTGAAAAAG ATTCCAGATCTCTCAAAAGCAACAAGCCTCGAGGAATTATGTCTCCAAGAATGCGTAAGTTTGTTAGAGCTCACAAGCTC TTTTCGCAATGCAACTAAGCTTTATCGATTGGATATATCAGGGTGTAAAAAAATCAAAGACTTCCCAAATGTTCCTGACA GCATCATAGAGTTGGATCTGTGCAAAACAGGGATAAAGGAGGTTCCTCCATGGATTGAGAACCTATTTCGTCTGCGTAAA CTAATTATGCATGGGTGCAGGAAGCTGAAAACTATATCGCCAAACATTTCTAAGTTGGAGAATCTTGAGTATCTTGCTCT GCGTAACTATGGTTATTGTGGTTTTCATAATCATGAAGAGAAATATGATGATGGATTATATATGTATGTTAACTTATTTG AAGCAATAATCGAGTGGGGGCCTGACTTCAAGCGCAGATGGAGATTACAATCAGACTTGGAGGTTGACTACATTTTGCCG ATATGTCTACCCGAGAAGGCTTTTACATCTCCTATATCATTACGTCTCCGCGGTTATGGTATCAAGACTATTCCAGATTG CATCACACGTCTCTCTGGACTAATTAAGCTTGAAGTCGGAGAATGCATAGAGCTCGTAGCACTTCCACCGCTTCCAGATT CCCTTCTGTATTTAGATGCACAAGGTTGTGAATCTTTGAAGAGAATAGACTCCTCCTCTTTTCAAAATCCCGAGATTTGC ATGAACTTTGCCTACTGCATCAACCTGAAACAAAAGGCGAGAAAGCTCATCCAGACATCAGCCTGCAAATATGCGGTTTT ACCGGGTGAAGAAGTGCCTTCACACTTCACTCACCGAGCTAGTTCAAGTTCTTTAACGATCACTTCGACTCCAAGACCTC TTCCTTCATCCTTCAGATTCAAAGCTTGTATCTTGTTGTCAACGGTATACGATCATCTCGGGGATACCAGTGATGATGAT GAAAAAGAGGGTGAGAATTCATTGACGAGGATGTCTTATTCCGTTAGGGCTAAACAAAATGGCCTCACGGTTGGATGTGG ATCAAACCAGCTTCTTATGCCAGCTCTATATAGGCCATTTCGAAGAATAGCTCCATATAGGTCAGATCTATGTGAATATA GAGAGCATCTGTATATATTTGAAGATTCTTTCTCTCTAAACCATGATTGCCCTGAAGCCGGAGAAACCACTTTCAGCGAG CTTACTTTTGTGTTTAGAGTCCATGATAAAAACAGGAAGGTCAAAGGCTGCGGTGTACGACTTTTAGAAGCAAACAATGA AAGTGCAGGTGGTGAGGATGAAGAAAAGGAAGATGATGATGATGATGATGGTGATGGTGGTGAGGGAGATGAAGGTGTAG ATTGTGATAATAATAATAAAATTGAGGAGAATGCTAATGACTGGTTTTTCTGA |
| AA seq | Len:1111 aa MASSSSSSSLARSWLYHVFLSFRGEDVRKTFLSHVLEKLENKGINVFIDNEIKRGESVGPELVKAIRHSRVAVVLLSRNY ASSSWCLDELVAIMKCREEFGQTVMTIFYQVDPSEVRKQTGDFGKAFDETCVGKTEEVKQAWRQALKDVAGIAGYDFNIC GNEADLINKVASDVMVVLGFTPSKDFDDFVGIEARIMEIKSKLILQSEEVKVIGIFGPTGIGKTTTARVLYKQLSTDFQF STFLEDIRGSYKKPCGNDYQLKLHFQKNLLCQILNRKNIEVHHLGGAQEMLGDKKVLLVLDEVDNWWQLEEMAKQRRWVG PGSIIIITTEDRKLLKAFGLGIDHMYKMKYPTSDESLQIFCQHAFGQNYPDDGFESLAREVTWLAGDLPLGLRVMGSYLR GMSRDEWIEALPWLRSTLDREIESTLRFSYEALRDNEKTLFLHLACLFTCFKVDSVKRYFANSRLEVNHGLEVLDQKSLI STDYGFIYMHRLLEQMGREIVKKQAMENPAAPKFLTDTKEISDVLDEDTARGNVVGIMLCTSQKMQINKSAFQGMNNLQF LYFAPDTTTFTLEGLDCLPDKLILLHWPECPLRVWPSKFSGKFLVELIMPCSEFELLWEGIKPLPCLKKLNLSSSQNLKK IPDLSKATSLEELCLQECVSLLELTSSFRNATKLYRLDISGCKKIKDFPNVPDSIIELDLCKTGIKEVPPWIENLFRLRK LIMHGCRKLKTISPNISKLENLEYLALRNYGYCGFHNHEEKYDDGLYMYVNLFEAIIEWGPDFKRRWRLQSDLEVDYILP ICLPEKAFTSPISLRLRGYGIKTIPDCITRLSGLIKLEVGECIELVALPPLPDSLLYLDAQGCESLKRIDSSSFQNPEIC MNFAYCINLKQKARKLIQTSACKYAVLPGEEVPSHFTHRASSSSLTITSTPRPLPSSFRFKACILLSTVYDHLGDTSDDD EKEGENSLTRMSYSVRAKQNGLTVGCGSNQLLMPALYRPFRRIAPYRSDLCEYREHLYIFEDSFSLNHDCPEAGETTFSE LTFVFRVHDKNRKVKGCGVRLLEANNESAGGEDEEKEDDDDDDGDGGEGDEGVDCDNNNKIEENANDWFF* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |