Names & Information
Knowledge of BnaA03G0400100GG:
| Gene Name | BnaA03G0400100GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: TMV resistance protein N-like [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
| NT seq | Len:2109 nt ATGGCTGCCGCATCTTCCTGCAAATCAGATCCTTCCCGCCGGCAGTACGACGTCTTTCTCAGCTTCCGAGGCGCAGACAC GCGCCACTCCTTCACGTGCTATCTCCTCGATTTTCTTCGCCGGAAAGGGATCGACGCTTTCATCGACGAGGAACTCCGGC GAGGCAACGATCTCTCGGGGCTTCTCGAACGAATCGAGCAATCGAAGATCTCAATCGTCGTTTTCTCCGAGAATTACGCG AATTCCGCGTGGTGCTTAGAGGAACTCGCGAAGATCATGGACTGCAAGAGGACTTTCGATCAGGTGGTTTTGCCGGTCTT CTACAAAGTTCCGGCGTCGGACGTGAGGTACCAAACTGGGAAATTCGGAGCTCCGTTCGAAAGATCTGAAGAGGTCTTCC AGGGATCTGAACACAGAGTCCCGGCGTGGAAAGAAGCTCTAAGAGCTGCATCTGACATCGCCGGCTATGTGCTCCCGGAG AGAAGCCCGGAGTGTGACTTTGTTGACAAAATTGCCAAGGAAACGTTCAAGGTGCTAAACAAGCTGTCTCCATCAGAATT TCGAGGTCTTCCGGGGATCGAATCTCGTATGATGGAGCTAGAAAAGTTAATTGACTTTGAAGAGACAAGTTGTGTGCGGA TCGTCGGAGTTCTTGGCATGGCTGGGATTGGCAAGACAACTGTTGCAGACTGTGTCTATAAGCAGAACTACAATCGCTTC GATGGTTACTGCTTTCTTGCAAACGTTCAGAACGAGTCAAAGCTCCATGGATTAGATCATTTGCAGCGGAAACTCCTCCG TAAGTTATTAGATGAAGACAATCTTGATGTTGGAGCTCCTGAAGGTGCGCATGACGCCTTTAAAGATAGACTTGGGAACA AGAAACTATTTATTGTGCTTGATGATGTGGCTAACGAAAATCAACTAAGAAATCTTATTGGTGGAGCGGGAAAGGAGCTG TACCGAGAAGGAACACGGATTGTTATAACAACAAGTAACAAGAAACTCCTAGAGAAGGTTGTGAATGAAACATACGTGGT TCCGAGGTTGAGTGGAAGAGAGAGTCTAGAGCTTTTCTGCTTGAGTGCGTTTTCTAGTAATCTCTGCGCCACTCCGGAGC TAATGGACTTATCAAACAAGTTTGTGGATTATTCTAAAGGGCATCCACTAGCTCTGAAGCTGTTAGGTTCTGATCTATGT CAAAGAGATAAGTCTTACTGGAAGCTGAAATGGGAGAGGTTGCAGAGAAGACCAGATGGGAAGATCCATGACGTGCTGAA AGTGTGCTATGAGGAACTATGCGAGGAAGAACAGAGCATTTTTCTGGATGTTGCTTGCTTCTTTAGATCAGAGAAGTTGG ATTTTGTTTCGAGTGTTCTGAGCACTCACCATACCGATGCTTCTACTCTGATTAGTGACCTTATTGACAAGTGCTTGATA ACAGTCTCGGATAACCGGCTTGAGATGCATGACTTACTGCTTACAATGGGGAGGGAGGTTGGTTATGAATCATCCATCAA AGAGGCTGGTAACCGCGGGCGGTTATGGAACCAAGAAGACATTTGTCGCGTTTTAAAGTACAAAACGGGTACTGCAGAGA TCAGAGGCATCTTCTTAGATATGTCTAATGTAGATAGCATGAAGCTAAGTGCTGATATTTTCGCGAGGATGTGGAATCTT AAGTTCCTCAAGTTCTACAATTCTCATTGTTCCAAGTGGTGTGAGAATGATTGTCGATTACGTTTTCCCAAGGGTCTTGA TTGCTTTCCAGATGAGCTGGTTTATCTCCACTGGCAAGGGTACCCTCTGGAGTATCTACCATCCAACTTCAACCCGAAGA AACTCGTTTATCTTAATCTGCGTTATAGCAACATTATGCAACTGTGTGAAGATGAGAAGGGACTACATGAGAGTAGCCTC GAGAAAGCGGTATCTGGAAAAGAAACTGAAACCGCAATGGATGAAGCTGTTGTGTCCAAGAGAGGCCGTTTCTGTATACA AGAAGAAGAGCTAATAAACGGGAAAAGAATAAAGGAAGAACTCTCTTTTGCTGAGTATGAGTGTTCTGTTCATCGTTACA TAGAGCCAGCAAAGCCTAATATCTGGTAA |
| AA seq | Len:703 aa MAAASSCKSDPSRRQYDVFLSFRGADTRHSFTCYLLDFLRRKGIDAFIDEELRRGNDLSGLLERIEQSKISIVVFSENYA NSAWCLEELAKIMDCKRTFDQVVLPVFYKVPASDVRYQTGKFGAPFERSEEVFQGSEHRVPAWKEALRAASDIAGYVLPE RSPECDFVDKIAKETFKVLNKLSPSEFRGLPGIESRMMELEKLIDFEETSCVRIVGVLGMAGIGKTTVADCVYKQNYNRF DGYCFLANVQNESKLHGLDHLQRKLLRKLLDEDNLDVGAPEGAHDAFKDRLGNKKLFIVLDDVANENQLRNLIGGAGKEL YREGTRIVITTSNKKLLEKVVNETYVVPRLSGRESLELFCLSAFSSNLCATPELMDLSNKFVDYSKGHPLALKLLGSDLC QRDKSYWKLKWERLQRRPDGKIHDVLKVCYEELCEEEQSIFLDVACFFRSEKLDFVSSVLSTHHTDASTLISDLIDKCLI TVSDNRLEMHDLLLTMGREVGYESSIKEAGNRGRLWNQEDICRVLKYKTGTAEIRGIFLDMSNVDSMKLSADIFARMWNL KFLKFYNSHCSKWCENDCRLRFPKGLDCFPDELVYLHWQGYPLEYLPSNFNPKKLVYLNLRYSNIMQLCEDEKGLHESSL EKAVSGKETETAMDEAVVSKRGRFCIQEEELINGKRIKEELSFAEYECSVHRYIEPAKPNIW* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | TIR domain |
| KEGG | hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A) |