Names & Information
Knowledge of BnaA03G0400200GG:
| Gene Name | BnaA03G0400200GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable WRKY transcription factor 19 [Brassica rapa] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1 |
| NT seq | Len:3879 nt ATGCGGCAGCCATGGAAGAGGAATTCGAGATCACACTGGTCAAATTCAATGGAGATTCTCTTCGAGAAATGTTTGACAAC CAGCGATCTCAGTAACCTTGACACTAATGTCGTCACCGCCAACGAGGACGTTGGTAAGTACTTTCGCTTAGTCACCGTCG TCGTCAGAGGTACTGAACAGATCCTTAGAATAGAGGATGAGGAAGGCAAGCCATGGCAGTTCGGGTTCACAGACCTCAAC GTTAGCCAACGCTACGTCTTGACCAAAGGTTGGAGCAACTACGTTAAGGAGAAGCAGCTTGGTGTCGGAGACTTTGTTTT CTTGCAGCGGCTTTTTACGGACAGCAGCAGGCTCTTCATTGGCTTTAGAAGGCGCGAAGCTGTTCTCGGACAGTGTCAGG ATTTAACATCATTGGCCACAGCCTCTGAGAAACTCAAGGAAGTTGAAACTCCTCTCCAGCTAAGAAGTCCTAGGCATAGC GTTACAGGGTTCGACGGTATTTTACTGGTTTCTGGTGGTGACAACCAGGACTCCGAGGAGAGATACTTCATCAGCTATAT CTCCAAAGAGCTGTGTCTCCGTGGCTTTACCCCTTTGATATATGATCTTACAAAGAGCACATTGGCTGGTGTGGAGATGC TGCACAGATCACGGGTGGGTATTATCATTTTCTCCAACAACTATGCTTCTTCTAGACAGTGTCTGGATAAATTTGTGGCA ATCTTGGACTATTCGAAAGCAAACAACTTTGTGCTTCTTCCGGTATTTTTTAAAGTGAAGGTGTCAGACATTAGGGGTCA AAGTGGCTCCTTTCGAAGAGCATTCTCACGACTTGAGCATTCAGTTCTGTCATCCCAAGTTCCCACATTAACTGCCATCA ACAAATATCAGTATATGAAAGGGGAAGATGTTATACTTGCCAAGAGTATTGTTAGTGATGTCTGTTTGCTGCTCAATTCT GAAACTAACATGAAACTAAGAGGAAGGCTTCAAATACAAAGTATATTGTCTTTACTAAATTGTTCTCATTTCTCAGCCCC ACATATTGTTGGACTTTGGGGTATGGCTGGCATAGGGAAAACTGCCATCACTAGAGAAATTTTCAGAAGACAAGCTGAGA GATATGACGTCTGCTACTTTCTGCCAGACTTCCATATAGTGTGTCAAACGAGAGGGCTGAGTCATTTGCGTGATGAATTC TTCTCGAGAATCTCTGGGGAAGAAAAGGTTACTATAGACGCATGTGATACTAAACTAGGTTTCATAAGGGATAGGTTCCT TAGTAAAAAGGTTCTCGTTGTTCTTGATGGCGTGAGTAGTGCTAGAGATGCAGAATTTTTGGTTGGAGGGTTTGGCTGGT TTTCTGGTGGACATACACTCATCTTAACATCTAGAAATAGGCAAGTTCTGGTACAGTGTAACGCTAAAGAGATTTACGAA ATCCAGAAACTATCCGAGCGTGAGTCTCTTCAGCTTTGCAGCCAGTTTGCCACTGAACAAAATTGGAAGGGAAGCACGTC ATTGGTCTCGGAGCTGGTAAACTACGCTAGTGGGATACCATTGGCTCTGTGTGCCTTAGGATCGTCCTTACAAAATCAAT GTATTAAAGATGAGAAGCAACATCTGAAAAGATTGCGTCAAAATCCTTTAGTTGAGATTCAGGATGCATTCAAAAGAAGT TTTAATGTACTAGATGGCAACGAGAAGAATACATTTTTGGACCTTGCATGTTTTTTCCGAGGGGAGAATAAAGATTATGT AGTGAACATCCTAGATGGTTGCGGTTTTCTTACAGAGTTAGGAATCTATGGTCTCATTGATGAGTCTCTCATCAGCATTG TAGATAACAAAATAGAAATGCTCAACATTTTCCAAGACACGGGTCGATTTGTTGTTTGTCAAGAGAGTAGTGAGACAGGG AAGCGTAGCAGATTGTGGGATCCTTCTGACATTGTTGATGTGCTGACCAACAACTCAGGAACAGAAGCAATTGAAGGCAT ATTTCTCGATTCAACTGGCTTGACAGTTGAGCTGAGTCCTACTGTTTTTGAGAAGATATATAGACTTAGATTCCTCAAGC TCTACAGTCCAACTTCTAAAAATCATTGCAACGTATCTCTACCTCAAGGCCTGTACTCTTTGCCTGATGAGCTACGTCTA CTCCACTGGGAACGATGTCCTTTAGAATCCTTACCTCGGAAATTCAATCCTAAAAATATTGTAGAACTGAACATGCCCTA TAGCAACATGACAAAACTATGGAAGGGAACAAAGAATCTTGAGAACCTAAAGAGGATCATTTTGAGTCACTCACGACGGT TGATTAAATTCCCAAGGCTTTCAAAGGCCAGGAACCTTGAGCATATTGATCTTGAAGGATGTACGAGTCTGGTTAAAGTT AACTCATCTATTCTTCATCACCACAAGCTTATTTTCTTGAGTCTTAAAGACTGTTCACATTTGCAAACAATGCCTACCAC GGTTCATCTAGAAGCTCTTGAAGTTCTCAATCTTTCCGGCTGCTTAGAACTTGAGGACTTTCCGGATTTCTCACCGAACC TGAAAGAGCTATATCTAGCTGGGACTGCCATAAGAGAAATGCCATCATCAATCGGTGGTCTCAGTAAACTTGTTACACTA GATCTGGAGAACTGTGACAGACTTCAACACCTGCCACCAGAGATAAGAAACTTGAAAGTTGTGGTTACCCTTAGCGCCAA ACGTCCTGCTGCTTCCATGAATCTATCTAGCGTGGAGGATAAAGCACCACCATACACGAGATGTCGATTGAAGAGAGTTA TTGAATCTGTTATTCTGAGCTTAAGAAAAAAGAAGCGAGAAAATACGGTCCCTAGGGCTGACATGAGGGTTAACGAGAAG ACAATGGAGGAAAAAGAAGTAAGAGAGAAATCGGTTGATGGTGACAACGATGACGATTTCGATCCGTTTGCTACTTTGTG TGATGACAGGAAGAAGAGTATTCTTAAAATTCAGGAGAAACTTGAAGATCCTGATCTGTCTGAAGAAGCTTTGGTTGAGT TGCTTCAGAAACTGGAATATGTGGACATAACACTGAAAGATCTTCAGGGAAGTAATATCGGGCGGCTTGTGAATTTAGTG CAGAGGCGTCGAACGGGAAATGCTAAGAGATTAGCTCAACAGCTTATCAAGAAATGGAAGGAAACAGTAGAGAAAACTCT CACAGATAAACAGCCTAGTGATCTCAAACCTCCGAATTTAATAGGTAAAAGAAAAGAGTGCAACTCTGAATCTCAGAACA AGCATCGTTCTCATCCATTTCATCATCCAAAAGACACGGAAACCTCTGTGCCGGAGGGTTCCTTGAACCTCGAAGGCCTC CCCTTACGCCCGGGAAAACCTGTGTGTGCCTCGTATTTTCACACTGGAAGCTGCATCTCCGGTCCTACTTGCATTTTTGA TCACCCATCGTTGATACCAGTTCACAAGACCACATCTCTGTACTCGAATCAGCTGGGATTGTCTTCTTCAATTGGAGATT CATCAAGTGACCTTGTGGGACCAGCAACTAAGCAACGAAGAATCCATAAGAACACATCTTCCATGGCTTCTGAGACACTG CACTCGAGTCCACTAGGATTTGCTTCTTCAATTGGAGATTCATCAAGTGAGCTTGTGGAAGCATCAACTAAGAAACCTCC AGTACACAAGAACACGTCTTCTCTGGTTCCACAGATGCCGCATTTCAATCCGCTAGGATTTTCTTATTCCATTGGAGAAT CGTCAAGTGAGCTTGTGGAAGCATCAACTGTGTCTGAGATAACACACACAAACGTTGGTAGAAACCCCTCTGATTCATGG GATGATGAAGAAGACTCTCAGTTTTGGTTGCATCTATGA |
| AA seq | Len:1293 aa MRQPWKRNSRSHWSNSMEILFEKCLTTSDLSNLDTNVVTANEDVGKYFRLVTVVVRGTEQILRIEDEEGKPWQFGFTDLN VSQRYVLTKGWSNYVKEKQLGVGDFVFLQRLFTDSSRLFIGFRRREAVLGQCQDLTSLATASEKLKEVETPLQLRSPRHS VTGFDGILLVSGGDNQDSEERYFISYISKELCLRGFTPLIYDLTKSTLAGVEMLHRSRVGIIIFSNNYASSRQCLDKFVA ILDYSKANNFVLLPVFFKVKVSDIRGQSGSFRRAFSRLEHSVLSSQVPTLTAINKYQYMKGEDVILAKSIVSDVCLLLNS ETNMKLRGRLQIQSILSLLNCSHFSAPHIVGLWGMAGIGKTAITREIFRRQAERYDVCYFLPDFHIVCQTRGLSHLRDEF FSRISGEEKVTIDACDTKLGFIRDRFLSKKVLVVLDGVSSARDAEFLVGGFGWFSGGHTLILTSRNRQVLVQCNAKEIYE IQKLSERESLQLCSQFATEQNWKGSTSLVSELVNYASGIPLALCALGSSLQNQCIKDEKQHLKRLRQNPLVEIQDAFKRS FNVLDGNEKNTFLDLACFFRGENKDYVVNILDGCGFLTELGIYGLIDESLISIVDNKIEMLNIFQDTGRFVVCQESSETG KRSRLWDPSDIVDVLTNNSGTEAIEGIFLDSTGLTVELSPTVFEKIYRLRFLKLYSPTSKNHCNVSLPQGLYSLPDELRL LHWERCPLESLPRKFNPKNIVELNMPYSNMTKLWKGTKNLENLKRIILSHSRRLIKFPRLSKARNLEHIDLEGCTSLVKV NSSILHHHKLIFLSLKDCSHLQTMPTTVHLEALEVLNLSGCLELEDFPDFSPNLKELYLAGTAIREMPSSIGGLSKLVTL DLENCDRLQHLPPEIRNLKVVVTLSAKRPAASMNLSSVEDKAPPYTRCRLKRVIESVILSLRKKKRENTVPRADMRVNEK TMEEKEVREKSVDGDNDDDFDPFATLCDDRKKSILKIQEKLEDPDLSEEALVELLQKLEYVDITLKDLQGSNIGRLVNLV QRRRTGNAKRLAQQLIKKWKETVEKTLTDKQPSDLKPPNLIGKRKECNSESQNKHRSHPFHHPKDTETSVPEGSLNLEGL PLRPGKPVCASYFHTGSCISGPTCIFDHPSLIPVHKTTSLYSNQLGLSSSIGDSSSDLVGPATKQRRIHKNTSSMASETL HSSPLGFASSIGDSSSELVEASTKKPPVHKNTSSLVPQMPHFNPLGFSYSIGESSSELVEASTVSEITHTNVGRNPSDSW DDEEDSQFWLHL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0003677 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16225 probable WRKY transcription factor 52 (A) |