Names & Information
Knowledge of BnaA03G0418700GG:
| Gene Name | BnaA03G0418700GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA03g45970D [Brassica napus] |
| Best Hit (SwissProt) | -- |
| NT seq | Len:2730 nt ATGGATCCTCGAGGTGACAGTTCCAGGCTCGGACAGTATCCGACAATGTCTTCTAGGAACATGTCTTCTTCATCTTCCTC AACTGCTTTCTTCTCAGCTAACCAATCTCCTTCAAGATCTCCCAAAATCCACCAAGAACTATCCGAATCAACTCGGTCTG ATGCTCATTGTGACAGCTTCGATCCTCTTACCTCCAGCTCTGGCTTTCAAGACCCTCAGCTCGAGTTACAGCCTCCTCAA TCTCAGAATCTTGAACCTGATCATAACGCTTACACACCTTCTAGGTATACTCAGACATCTTCTGCGTCGGTTTCTTACAA CAGGGTGAGATGTTGCGACGTGTTCTTGGGGTTGCACGGTCAAAAACCTTCTCTGCTACGTTTCGCGGACTGGCTCAGAG CTGAGCTAGAGCTTCAAGGGATGAGCTGCTTCATGTCGGACAGAGCAAAATGCAGAAGCTCTCGGAAACAGAGGATAATC GAGAAAGCCATGGACGGTGCTTCCTTCGGAGTCATCATCCTAACGAGAAAGTCCTTCAAGAACCCTCACACGATCGAGGA GCTCCGGTTTTTCGCCAACAAGAAGAATCTAGTTCCAGTTTTCTTCGATCTTTCTCGAGAGGACTGTCTCGTGAGGGACA TAGTGGAGAAGAGAGGAGACTTGTGGGAGAAGCACGGAGGCGAGCTGTGGGAGTGCTACGGAGGGATTGAGAAAGAGTGG AAAGAGGCGGTTAACGGGCTATCGCGTGTTGATGACTGGAAGATTGAGGCTCATGAAGGTAACTGGAGAGACTGTGTGTT CAGAACGGTTGAGTTGTTGGCTACGAGGTTGGTTGGGAGGAGAAGTGTAGTCGAGAGGCTGGCGAAATGGCGAGATAAAG CGGCGAAAGAGGAGTTTCCGTATCTGCGGAACGAGGGGTTCGTTGGGAGGAAGAAGGAGCTCTCGGAGCTGGAGTTTGTT TTGTTTGGAGATGGAGAGGATTACTTCGAGTTACCGACGAATAAAAGGAAGAACAAAGGGAAAGAGAAAGAGAAAGTTGT GTGGAAGGAGTTAGAGAAAGAGATTGAGTTAGTTAAGAAGACGAGGAAGAAGAAGAAGAAAAAGAGATCGATGAAAATCA TCTGCGGGAAAGGCGTGGCGTGCGTCTCGGGAGAAGCAGGGATCGGCAAAACCGAGCTGCTTCTCGAGTTTGCTTACAGG CATCACCAGAGGTACAAGATGGTTCTCTGGATAGGCGGCGAGAGCCGTTACATCAGGCAGAACTACCTGAATCTTTATCG GTACTTGGACGTCGACGTTGGGGTGGAGAATTTCTCCGATAGAGCGCGGTTCAAGAGCTTCGAAGAGCAGGAAGATACCG CGGTTTCGAGGATCAGGAGAGAGCTGATGAGGGACATACCCTTCTTGCTTGTTATCGATAACTTGGAGAGCGAAAAGGAC TGGTGGGACTCGAAGCTTGTGATGGATCTTCTCCCCAGGTTCGGAGGAGAGACGCACATTTTGATATCTACGCGTCTCTC CAGAGTTATGTACATGGAGCCGTTGAGACTCCCTTACCTCTCTGCCGCTGAAGCGATGGCATTGATGCAGGGGAACGTTA AAGAGTATCCGGTTCAGGAGATGGATGCGTTGAGAGTGATTGAAGAGAAGCTAGGGAGGTTAACGCTGGGACTAGGTATC GTGGGAGCTATATTGTCAGAGCTTCCTATAAACCCGACCCGGCTTTTGGATACTATAAACAGAATGCCGTTGAGAGAGAT GTCCTCATGTAGTAGTGCGTTGAGAAGAAGAGTGTTTCTGTTGCAGCTGTTTGAAGTGTGTTTTTCGATCTTCGACCACG CGGATGGACCGAGGGGTTTAGCTACCAGAATGGTTGTTGCGAGCGGGTGGTTAGCTCCGGGGCCTGTTCCAGCCTCTCTA TTAGCTTTGGCTGCTTATAAACTCCCTGAGAAGCACAGAGGATGTCTGTGGAGAAGACTGAGACGAGCTATAAGCTGTGG TTTTGCGTCTTCGAATTCGAAAAGATCAGGAGCTGAAGCTGCTTCCATGTTGCTTAGGTTCAACATCGCTAGAGCTAGTA ACGTCAAGCTAGGGTTTGTACAGATACACGAGCTTGTGAGACTCTATGCGAGAAATAGACTGATGGTGAACGAGACTGCT CCTGCGATGGTTCGGGCTGTGATAAACAAAGGCTGGAGCGTTGAAACCGCGGATCAGATATGGGCGGTTTGTTTCTTGCT CTTCGGTTTCAGCAACGAAGCTCCGAGTATTCAGCTGAAGATAACAGAGCTGCTGTTTCTTGTGAAACAAGTAATCTTGC CTCTAGCGATTAGAACCTTCGTGACGTTTTCGCGGTGCGGTGCGGCCGTGGAGCTGCTCAGGGTCTGCACAAACGCGCTA GAAGCGGCTGACCAAACGCTGGTTAAGCCGGTGGAGAAGTGGTTGGACAAGTCGCTTTGTTGGAGATCTGTTCAGACAAG TGCTCAGCTAAACCCTGTTCTATGGGAAGAACTTGCTTTAGCTCGAGCCACCGTGCTAGAGACGCGAGCTAAGTTGTCTC TACGTGGAGGGCAGTTTGGTGTGGCTGATGATCTAATAAGAAAAGCAATCTTCATCAGAACTTCTATCTCGGGTGAGGAT CATCCTGGGACTGTGTCGGCTAGAGAGACATTGAGTAAGTTAACGAGGCTTTCATCTAATGTTCATCAGAGTCACAACAC TTCACCGTAA |
| AA seq | Len:910 aa MDPRGDSSRLGQYPTMSSRNMSSSSSSTAFFSANQSPSRSPKIHQELSESTRSDAHCDSFDPLTSSSGFQDPQLELQPPQ SQNLEPDHNAYTPSRYTQTSSASVSYNRVRCCDVFLGLHGQKPSLLRFADWLRAELELQGMSCFMSDRAKCRSSRKQRII EKAMDGASFGVIILTRKSFKNPHTIEELRFFANKKNLVPVFFDLSREDCLVRDIVEKRGDLWEKHGGELWECYGGIEKEW KEAVNGLSRVDDWKIEAHEGNWRDCVFRTVELLATRLVGRRSVVERLAKWRDKAAKEEFPYLRNEGFVGRKKELSELEFV LFGDGEDYFELPTNKRKNKGKEKEKVVWKELEKEIELVKKTRKKKKKKRSMKIICGKGVACVSGEAGIGKTELLLEFAYR HHQRYKMVLWIGGESRYIRQNYLNLYRYLDVDVGVENFSDRARFKSFEEQEDTAVSRIRRELMRDIPFLLVIDNLESEKD WWDSKLVMDLLPRFGGETHILISTRLSRVMYMEPLRLPYLSAAEAMALMQGNVKEYPVQEMDALRVIEEKLGRLTLGLGI VGAILSELPINPTRLLDTINRMPLREMSSCSSALRRRVFLLQLFEVCFSIFDHADGPRGLATRMVVASGWLAPGPVPASL LALAAYKLPEKHRGCLWRRLRRAISCGFASSNSKRSGAEAASMLLRFNIARASNVKLGFVQIHELVRLYARNRLMVNETA PAMVRAVINKGWSVETADQIWAVCFLLFGFSNEAPSIQLKITELLFLVKQVILPLAIRTFVTFSRCGAAVELLRVCTNAL EAADQTLVKPVEKWLDKSLCWRSVQTSAQLNPVLWEELALARATVLETRAKLSLRGGQFGVADDLIRKAIFIRTSISGED HPGTVSARETLSKLTRLSSNVHQSHNTSP* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | TIR domain |
| KEGG | -- |