Names & Information
Knowledge of BnaA03G0435200QU:
| Gene Name | BnaA03G0435200QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA03g44090D [Brassica napus] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1 |
| NT seq | Len:3630 nt ATGGAAGCATATGAAGCTTTCTGTGAGTTTCTCAGCAACCGCCAACCTCCGTGTTCGCTCTCTGAGTGCACTGCCGATGA CGCCATTGAGTTTCTCCTTACCCTTCCCTCCGACAGAATCAACAAGGTTGCCGACCGCCTCACCGCCGTCGACTTCAGAG GATACCATAAGGAAAATCCATTTGGCAGCTCGATGGTAAGAACATACTTGAAGCTTATGACAGGACAAGCTGATGGGGAA GAATACAAGTCTGACAATACGGGCCAGGACGACAAGGTGGATCTGTTCGAGACATGCTTGACAAGCAGCGATGTCGGTGG CTTGGATCGCCTCGTCCTCACACCCAACCAGGATGCCCAAACTTACTTTGTCTTAGCCACTATCCCTGGAGACCCCGAGA GCTATCTTCGGTTGGAGGACGAGGAAGGCAAGCCGTGGCTGTTCGGTTTCTCATACCCCAAAGTTGCCTGCCAGAGCTTT GTCTTGAGTAAATGCTGGAGGAGCTTCGTTAAGGAGAAGCAACTTGATGCTGGAGACTTTGTCTTCTTCCAACGGCACCT TACAGACAGAAGAAGACTCTTCATTGGCTGCAGAAGGCGTGAAGGCTGCACTGCCTCCAGGGAAGACGCAGCTCTGGATT CAACATCACCAGATACATCCGCCAAAGCGCTAGAATTCAGAGATAAACTCAAGGCAGTTGAAACTGCTTTCCAGCCAAAA TTGTCTGAGCGTAATAGCATTACGGGCTCTGACCCTGTCTTTGTCATTTATTGTGGTGACAACCAGGACTCCGAGGAGGT ATACCTCATCAGCTACATCTTCAACGAGTTGCGTCTACGTGGCTTCATCCCTTTGAGATATGATCTAACCAGTGGCTTAG GGACTAGGAACCCGGAGATGCTATACAAATCACGGGTTTGCGTTATCATTTTCTCGATGAACTATGCTCATTCTCGAGAG TGCATGGATGAATTCGTGGAAAATATGGGGCATCTGAATAAAAAGAACGTTGTGAAAATTCCTGTGTTTTTTAAAGTAAG CTTTTCGGAAGTCAGGGGTCAAAGTGGCTCTTTTGAAGAAGCATTCACACGACTTGGGAATTTAGTCGAGGCAGCCCAAG TTCTGAAATGGAGGGAGGCTTTACTCGAATTACCTTCCATCAATAAATATCAGTATACGAAGGGGGATGAGGTTATACTG GCCAAGAAAATTGTCGGAGATGTATGTTTGATGGTCAAATATGAAATGGACGATAAGCGACGAGGAACAAGGTCTCAATT GGATAGTGTAATGTCTTTGCTAAACTTTTCTCAATCCTCAGCCCCACGTATTGTTGGACTTTGGGGTATGGCTGGCATAG GGAAGACCACCATCACAGGAGACATCGTCAGAACACAAGCTCAGAGATTTGACGTGTGCTACTTTCAACCAGACTTTCAT CTAATGTGTCAAACAAAAGGGCTGAGTCATTTGCGTGAAGAATTCTTCTCCAAACTTTTTGGTGAAGAAAACGTTTTCAA AGACGCATGTGACACAAAACTAAGTTTCGTAAGGGATAGGCTCCTTGATAAAAGGGTTCTCATCGTTCTTGATGGTGTGA GTAGTGCTCGAGATGTAGAAGCTTTTCTTGGAGGATTTGGCTGGTTTTCGGGTGGACATACAATCATATTTACATCTAGG AATAGGCAAGTTCTTGTACAGTGTAATGCCCAAGAGCTTTACAGTATCCCAAAACTTACCAAGGACGAATCTATTCGCAT TTGCCTACAGTTTGGCTCTAAACAAGTTTGGACGAGAAAGATGTCGGAGCTGGTGAAATACGCTAGTGGCATTCCCTTGG CTCTTAGTGTCCTGGCCTCGCCTGTAGAAGATCAATATATTAAAGCTGAGAAAAATCGCCTGAGAAGACTGCGTCAACAT CCTCCAGTCAAAATTCAGGATGCATTTAGAATAAGTTTTGATGGACGAGATGACAACGAGAAGAGCATATTTTTGGACCT GGCTTGTTTTTTCAGGGGGAAGTATAAAAAGAGTGTGGTGAACATACTTGATGGTTGTGGTTTTTTTACAGATTTAGGTA TACAGGGTCTCATTGATGAGTCTCTAATCAGCCTTGTAGATGACAAGATAGTAATACCCAACATTTTTCAAGACACGGGA AGATTTTTTGTTCGTCAAGAAAACAAAGAAGCAGGCAAGCGCAGCCGATTGTGGGATTCTGATGACATTGTTGATGTGCT GATAAAAAAATCAGGAACCGAAGCAATTGAAGGCATATTTTTGGATCTCTCCGGCTTGACATTTGCGTTGAGTCCTACGG TATTTGAGATGATGTATAGACTTAGATTGCTGAAGCTACACTGTCCAACTCCCGATAACCATTGCAAGGTTTCTCTACCT GAAGGCCTCCACTCTTTACCTGATGAGCTACGGCTACTCCATTGGGAAAGATATCCTATTGAATCCTTACCTCGCAACTT CAACCCTAAAAATCTCGTAGAACTGAACATGCCTTATAGCAATTTGACAAAACTATGGAACGGAACAAAGAATCTTGAGA AGCTAAAGAGGATCAATCTGAGTCACTCCCGACAGTTGACTAAATTCCCAAGGCTTTCAAAGGCCAAGAACCTTGAACAT ATTGATCTTGAAGGATGTACGAGTCTGGTTAAGGTTAACTCATCTATTCTTCATCATCACAAGCTTACTTTCTTGAGTCT GAAAGACTGTTCACATTTGCGAATTATGCCTGCCACGGTTCATTTAGAAGCTCTTGAAGTTCTTAATCTATCTGGCTGCT CAGAACTCGAGGATCTTCAGGATTTCTCACCAAACCTGAGTGAGCTATATCTAGCTGGGACTGCCATTACAGAAATTCCA TCTTCAATAGGGGGTCTCACTAGACTTGTTACGCTAGATCTGGAGAATTGTAATGAACTTCAGCATCTGCCGCCAGGGAT AAGTAACCTGAAAGCTGTGGTCAGTCTTAGCGCAAAACGTCCTGCGTCTTCCAAGGATTCAAGGGATCTTTCTAGCTTTG TGGATATGGCGTCACCATATAGAAGATATCCGTTAAAGAGAGTTATTGAAACTGTTATTCAGAGGTTAAGAAAAAGGAAG CAAGAAAAGAGTGTTTCTATAGCCACAAACCTTTCTGAGGTTAAGCTTGGCTCAGATTCTACCTTGGTAAGTGATCTTTC TTACAACACTTCCTGGGGATTCTTTGGTTTACCGGAAAGACTCGGCCGACCTGAATGCCTATTTTACATGAAGACAGGAG ACTGCAAATTTGGCAATGACTGTAAATTTCACCATTCGAGAGACAGAGAAACCCATGTCCCTGATAGTTCTTTAAGCCAC CCATCACGACCGGGAAATCCTGTGTGTGCCTCGTATTTCTACACTGGAAACTGCCGCTCGGGTGCTACTTGTATGTTTGA TCACCCATCGTTGGTACCAACTCACAGGAACACAGCTTCATATTTGAAGCAGCCAGGATTTTCATCTTCAATTGGAGATT CATCTAGTGAGCTTGTGGAAGCAGTAACTAAGAAACGGAGAATAGACAATAACACAATTCCCATGGTTTCTGAGACATCA GAGGTTTTAAATGACCGCCACCAAGGTTGA |
| AA seq | Len:1210 aa MEAYEAFCEFLSNRQPPCSLSECTADDAIEFLLTLPSDRINKVADRLTAVDFRGYHKENPFGSSMVRTYLKLMTGQADGE EYKSDNTGQDDKVDLFETCLTSSDVGGLDRLVLTPNQDAQTYFVLATIPGDPESYLRLEDEEGKPWLFGFSYPKVACQSF VLSKCWRSFVKEKQLDAGDFVFFQRHLTDRRRLFIGCRRREGCTASREDAALDSTSPDTSAKALEFRDKLKAVETAFQPK LSERNSITGSDPVFVIYCGDNQDSEEVYLISYIFNELRLRGFIPLRYDLTSGLGTRNPEMLYKSRVCVIIFSMNYAHSRE CMDEFVENMGHLNKKNVVKIPVFFKVSFSEVRGQSGSFEEAFTRLGNLVEAAQVLKWREALLELPSINKYQYTKGDEVIL AKKIVGDVCLMVKYEMDDKRRGTRSQLDSVMSLLNFSQSSAPRIVGLWGMAGIGKTTITGDIVRTQAQRFDVCYFQPDFH LMCQTKGLSHLREEFFSKLFGEENVFKDACDTKLSFVRDRLLDKRVLIVLDGVSSARDVEAFLGGFGWFSGGHTIIFTSR NRQVLVQCNAQELYSIPKLTKDESIRICLQFGSKQVWTRKMSELVKYASGIPLALSVLASPVEDQYIKAEKNRLRRLRQH PPVKIQDAFRISFDGRDDNEKSIFLDLACFFRGKYKKSVVNILDGCGFFTDLGIQGLIDESLISLVDDKIVIPNIFQDTG RFFVRQENKEAGKRSRLWDSDDIVDVLIKKSGTEAIEGIFLDLSGLTFALSPTVFEMMYRLRLLKLHCPTPDNHCKVSLP EGLHSLPDELRLLHWERYPIESLPRNFNPKNLVELNMPYSNLTKLWNGTKNLEKLKRINLSHSRQLTKFPRLSKAKNLEH IDLEGCTSLVKVNSSILHHHKLTFLSLKDCSHLRIMPATVHLEALEVLNLSGCSELEDLQDFSPNLSELYLAGTAITEIP SSIGGLTRLVTLDLENCNELQHLPPGISNLKAVVSLSAKRPASSKDSRDLSSFVDMASPYRRYPLKRVIETVIQRLRKRK QEKSVSIATNLSEVKLGSDSTLVSDLSYNTSWGFFGLPERLGRPECLFYMKTGDCKFGNDCKFHHSRDRETHVPDSSLSH PSRPGNPVCASYFYTGNCRSGATCMFDHPSLVPTHRNTASYLKQPGFSSSIGDSSSELVEAVTKKRRIDNNTIPMVSETS EVLNDRHQG* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0003677 |
| Pfam | Leucine Rich Repeat |
| KEGG | TMV resistance protein N-like; K19613 leucine-rich repeat protein SHOC2 (A) |