Gene Name | BnaA03G0453900ZS |
Gene Location | |
Gene Structure | |
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Protein Name | |
Alternative splicing | |
Homology | |
Best Hit (NR) | PREDICTED: TMV resistance protein N-like [Brassica rapa] |
Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
NT seq | Len:3681 nt
ATGGCTGCCGCATCTTCCTGCAAATCAGATCCTTCCCGCCGGCAGTACGACGTCTTTCTCAGCTTCCGAGGCGCAGACAC
GCGCCACTCCTTCACGTGCTATCTCCTCGATTTTCTTCGCCGGAAAGGGATCGACGCTTTCATCGACGAGGAACTCCGGC
GAGGCAACGATCTCTCGGGGCTTCTCGAACGAATCGAGCAATCGAAGATCTCAATCGTCGTTTTCTCCGAGAATTACGCG
AATTCCGCGTGGTGCTTAGAGGAACTCGCGAAGATCATGGACTGCAAGAGGACTTTCGATCAGGTGGTTTTGCCGGTCTT
CTACAAAGTTCCGGCGTCGGACGTGAGGTACCAAACTGGGAAATTCGGAGCTCCGTTCGAAAGATCTGAAGAGGTCTTCC
AGGGATCTGAACACAGAGTCCCGGCGTGGAAAGAAGCTCTAAGAGCTGCATCTGACATCGCCGGCTATGTGCTCCCGGAG
AGAAGCCCGGAGTGTGACTTTGTTGACAAAATTGCCAAGGAAACGTTCAAGGTGCTAAACAAGCTGTCTCCATCAGAATT
TCGAGGTCTTCCGGGGATCGAATCTCGTATGATGGAGCTAGAAAAGTTAATTGACTTTGAAGAGACAAGTTGTGTGCGGA
TCGTCGGAGTTCTTGGCATGGCTGGGATTGGCAAGACAACTGTTGCAGACTGTGTCTATAAGCAGAACTACAATCGCTTC
GATGGTTACTGCTTTCTTGCAAACGTTCAGAACGAGTCAAAGCTCCATGGATTAGATCATTTGCAGCGGAAACTCCTCCG
TAAGTTATTAGATGAAGACAATCTTGATGTTGGAGCTCCTGAAGGTGCGCATGACGCCTTTAAAGATAGACTTGGGAACA
AGAAACTATTTATTGTGCTTGATGATGTGGCTAACGAAAATCAACTAAGAAATCTTATTGGTGGAGCGGGAAAGGAGCTG
TACCGAGAAGGAACACGGATTGTTATAACAACAAGTAACAAGAAACTCCTAGAGAAGGTTGTGAATGAAACATACGTGGT
TCCGAGGTTGAGTGGAAGAGAGAGTCTAGAGCTTTTCTGCTTGAGTGCGTTTTCTAGTAATCTCTGCGCCACTCCGGAGC
TAATGGACTTATCAAACAAGTTTGTGGATTATTCTAAAGGGCATCCACTAGCTCTGAAGCTGTTAGGTTCTGATCTATGT
CAAAGAGATAAGTCTTACTGGAAGCTGAAATGGGAGAGGTTGCAGAGAAGACCAGATGGGAAGATCCATGACGTGCTGAA
AGTGTGCTATGAGGAACTATGCGAGGAAGAACAGAGCATTTTTCTGGATGTTGCTTGCTTCTTTAGATCAGAGAAGTTGG
ATTTTGTTTCGAGTGTTCTGAGCACTCACCATACCGATGCTTCTACTCTGATTAGTGACCTTATTGACAAGTGCTTGATA
ACAGTCTCGGATAACCGGCTTGAGATGCATGACTTACTGCTTACAATGGGGAGGGAGGTTGGTTATGAATCATCCATCAA
AGAGGCTGGTAACCGCGGGCGGTTATGGAACCAAGAAGACATTTGTCGCGTTTTAAAGTACAAAACGGGTACTGCAGAGA
TCAGAGGCATCTTCTTAGATATGTCTAATGTAGATAGCATGAAGCTAAGTGCTGATATTTTCGCGAGGATGTGGAATCTT
AAGTTCCTCAAGTTCTACAATTCTCATTGTTCCAAGTGGTGTGAGAATGATTGTCGATTACGTTTTCCCAAGGGTCTTGA
TTGCTTTCCAGATGAGCTGGTTTATCTCCACTGGCAAGGGTACCCTCTGGAGTATCTACCATCCAACTTCAACCCGAAGA
AACTCGTTTATCTTAATCTGCGTTATAGCAACATTATGCAACTGTGTGAAGATGAGAAGAACACAGGAGAGTTAAGGTGG
GTCGATCTCAGTTATTCAAAAGAGTTGATGAATCTAACTGGCTTGTTGGAAGCTCGTAAACTCGAGAGACTGAATCTTGA
AAACTGTACAAGTTTAACCAAGTGTTCAGCGATCCGGCAGATGGACAGTCTTGTTTCACTGAATCTCAGAGATTGCATAA
ACCTCAAGAGTCTTCCAAAGAGAATCAGTTTGAAGTCTCTGAAGTTTGTTATCCTCAGTGGATGTTCAAAACTCAAGAAA
TTTCCAACAATCTCGGAAAACATAGAATCTCTGTATTTGGATGGCACAGCGGTTAAAAGAGTTCCTGAATCCATAGAAAA
TCTCCAGAAACTTACCGTGTTGAATTTGAAGAAGTGTTCCAGGTTGATGCATCTCCCTACCACTCTTTGCAAGCTGAAGT
CTCTTAAAGAGCTGCTTCTCTCTGGATGTTCAAAGCTAGAGAGTTTCCCGGACATCAACGAAGACATGGAAAGCTTAGAG
ATTCTGCTCATGGATGATACAGCCATCAAACAAACTCCCAGAAAAATGGATATGAGCAATCTCAAGCTGTTCTCATTTGG
TGGATCTAAAGTCCATGATCTCACGTGTTTGGAGCTGCTGCCTTTCTCTGGCTGCTCGCGGTTATCAGACATGTATCTCA
CAGATTGTAATCTGTACAAGTTGCCAGACAGCTTTAGCTGCTTATCCTTGCTGCAGACTTTATGCTTGAGCAGAAACAAT
ATCAAAAATCTACCTGGAAGCATCAAGAAACTTCATCATCTCAAATCTCTTTACTTGAAGCATTGTCAACAGCTCGTTTC
TCTTCCAGTGCTTCCATCAAATCTGCAGTATCTGGATGCTCATGGCTGTATCTCACTCGAAACAGTGGCTAAACCCATGA
CGCTTCTTGTGGTAGCTGAAAGGAACCAGTCTACTTTCGTCTTCACTGATTGTTTCAAGCTAAACAGAGATGCGCAAGAA
AGTATTGTGGCTCATACTCAACTCAAGAGTCAAATACTAGGGAATGGATCTCTTCAACGTAACCATAAGGGACTTGTTTC
GGAGCCTTTAGCTAGTGCAAGTTTTCCAGGAAACGATTTGCCATTATGGTTCCGCCATCAGAGAATGGGATCTTCAATGG
AAACCCACCTGCCTCCACACTGGTGCGACGATAAGTTCATCGGACTTTCTCTCTGCGTAGTTGTCTCATTCAAGGACTAT
GTAGATAAAACCAACCGATTTTCAGTGATATGCAAGTGCAAGTTCAGAAACGAGGACGGTGATTGCATCAGCTTTACTTG
TAATCTCGGAGGATGGAAAGAGCAATGTGGATCATCATCTAGCCGCGAAGAAGAACCAAGAAAGCTTACCTCTGATCACG
TCTTCATCAGCTACAACAACTGCTTCCACGCCAAGAAAAGCCATGATCTCAACCGATGCTGCAACACCACAGCCTCGTTC
AAGTTCTTTGTTACTGATGGTGTATCCAAAAGAAAGCTAGATTGCTGTGAGGTGGTGAAATGTGGGATGAGCTTGTTATA
TGCACCTGATGAGAATGATTGTAGATTGCAGGGACTACATGAGAGTAGCCTCGAGAAAGCGGTATCTGGAAAAGAAACTG
AAACCGCAATGGATGAAGCTGTTGTGTCCAAGAGAGGCCGTTTCTGTATACAAGAAGAAGAGCTAATAAACGGGAAAAGA
ATAAAGGAAGAACTCTCTTTTGCTGAGTATGAGTGTTCTGTTCATCGTTACATAGAGCCAGCAAAGCCTAATATCTGGTA
A |
AA seq | Len:1227 aa
MAAASSCKSDPSRRQYDVFLSFRGADTRHSFTCYLLDFLRRKGIDAFIDEELRRGNDLSGLLERIEQSKISIVVFSENYA
NSAWCLEELAKIMDCKRTFDQVVLPVFYKVPASDVRYQTGKFGAPFERSEEVFQGSEHRVPAWKEALRAASDIAGYVLPE
RSPECDFVDKIAKETFKVLNKLSPSEFRGLPGIESRMMELEKLIDFEETSCVRIVGVLGMAGIGKTTVADCVYKQNYNRF
DGYCFLANVQNESKLHGLDHLQRKLLRKLLDEDNLDVGAPEGAHDAFKDRLGNKKLFIVLDDVANENQLRNLIGGAGKEL
YREGTRIVITTSNKKLLEKVVNETYVVPRLSGRESLELFCLSAFSSNLCATPELMDLSNKFVDYSKGHPLALKLLGSDLC
QRDKSYWKLKWERLQRRPDGKIHDVLKVCYEELCEEEQSIFLDVACFFRSEKLDFVSSVLSTHHTDASTLISDLIDKCLI
TVSDNRLEMHDLLLTMGREVGYESSIKEAGNRGRLWNQEDICRVLKYKTGTAEIRGIFLDMSNVDSMKLSADIFARMWNL
KFLKFYNSHCSKWCENDCRLRFPKGLDCFPDELVYLHWQGYPLEYLPSNFNPKKLVYLNLRYSNIMQLCEDEKNTGELRW
VDLSYSKELMNLTGLLEARKLERLNLENCTSLTKCSAIRQMDSLVSLNLRDCINLKSLPKRISLKSLKFVILSGCSKLKK
FPTISENIESLYLDGTAVKRVPESIENLQKLTVLNLKKCSRLMHLPTTLCKLKSLKELLLSGCSKLESFPDINEDMESLE
ILLMDDTAIKQTPRKMDMSNLKLFSFGGSKVHDLTCLELLPFSGCSRLSDMYLTDCNLYKLPDSFSCLSLLQTLCLSRNN
IKNLPGSIKKLHHLKSLYLKHCQQLVSLPVLPSNLQYLDAHGCISLETVAKPMTLLVVAERNQSTFVFTDCFKLNRDAQE
SIVAHTQLKSQILGNGSLQRNHKGLVSEPLASASFPGNDLPLWFRHQRMGSSMETHLPPHWCDDKFIGLSLCVVVSFKDY
VDKTNRFSVICKCKFRNEDGDCISFTCNLGGWKEQCGSSSSREEEPRKLTSDHVFISYNNCFHAKKSHDLNRCCNTTASF
KFFVTDGVSKRKLDCCEVVKCGMSLLYAPDENDCRLQGLHESSLEKAVSGKETETAMDEAVVSKRGRFCIQEEELINGKR
IKEELSFAEYECSVHRYIEPAKPNIW* |
Expression(FPKM) | |
Classification(Core/Distributed) | |
Function classfication (GO) | GO:0005515 |
Pfam | Leucine Rich repeats (2 copies) |
KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |
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