Names & Information
Knowledge of BnaA04G0101300QU:
| Gene Name | BnaA04G0101300QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA04g27840D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS6 OS=Arabidopsis thaliana GN=RPS6 PE=1 SV=1 |
| NT seq | Len:3042 nt ATGATTGAGAAAATCGTCAATGATGTTTCCAACAAACTGTGTTCAACAGCATGCAATGATTTTGACGACTTTGTTGGAAT CGAAGCTCACATGAAAAACATGAATTCGTTGTTGGAGTTGGAGTCAGAGAGGGTGGTAATGGTAGGGATTTGGGGTCCAT CTGGTGTTGGTAAGACTAGCATAGGACGAGCTCTCTTTAGTCAACTCTCCTGTCAGTTCCAAGGAAGCATTTTTATTGAC AAGACTAAGGAGATTTATACTAGGGCCAACTCTTACGACTACAACACCAAGTTGGACTTACAAGCACAGTTTCTGTCTGA AATTTTGGACCAGGAGGACATAAAGGTACATAGTTTACATACGATGATATATAGGTTAGGGCAGAAGAAAGTTCTTGTTG TGTTTGATGATATGGATGACCAGGTCCTCTTAGATGCCGTGTTGGGGAAAACTAGATGGGTTGGTCCTAGAAGTAGAATT GTAGTGATTTCGAAGGACAGGGAGCTTCTTAGGGCCTGCGGAATTGAATCTGATCGTATCTATGAGGTGGATTACCCATC TAAAGAGCTAGCTTCCCAGATGTTCTGCCGATGTGCGTTCGGACAAGACTCTCCACCTGATGGTTTTACGGAGCTTGCTA GTGATGCTGTAGAGCTCACCGGGAATCTTCCACTGGCTCTCAACGTTTTGGGTTCATCCCTCGCTGGGTTGAGGAAGGAG GAGTTGGAAGAGAGGATGCCTAAGCTCGTAAGTCGTATGGCTGGACAGGTTGATAAAACATTAAAAGACAGCTATGACAG GCTAAAAGAAGAAGATAAAGCTATATTCCGTCACATAGCATGCTTATTTAATCATAAACCATGTGACTACGTGAAAGGAT TGCTTGAAGATAGTAAGTTGGATGTGGATGTTGGACTTGTTACTCTAGCTGAACGGTGCCTCATTCAGATATCAGAGGAT AAGATCATAAGGATGCACGATTTCCTGCAAAAAATGGGTAGAGAAATCGTTCGGCAACCATGTATTCAGGACCCTGGAGA ACGTGAATTCTTATTGGATTCTAAGGAGATCTATGATGTACTTGTTGATGGAACTGGAACTAAAAGTGTTTTAGGCATAT TTTTGAACTTACGTGAAATCGAGGATGAATTATCTATTAGCGAGGAAGCATTCAGTGGGATGAAAAACCTTCGGTTTCTA AGAATCTACGGGGTCTCAGAGGAGGATAAAGAAACCATTTTGCAATTACGGGGAGGCAAAAACCGTAGGAGGCGCCAACT TGGATTACGAAAATGGTACTGGTGGGGGTCCATGCATTTACAAGAAGGCAAAAACCATATTTGGCGCCAACTTAGATTAC TGGAATGGTGGGGGTGCTCAATGACAAGCATGCCTTTGAACTTTCGTGCAGAAAATCTTGTTGAGCTCAGAATGCCGGAT AGTCAACTTCACAAATTGTGGGAAGGAGTTGAGGTGCTTAAAAGCCTCAAGACGATGGATTTGCGGAGATCTAAAAACCT GAAAGTATTCCCAGATCTTTCAAAGGCTACCAGTCTTGAGGAACTGTATCTTGAAGATTGCTGTAGTCTGGTGACGATTC CTTCCTCTATTCGTAGTCTCAAGAAACTGAGGAAGCTAGACATGAAAAGATGCACAAAACTGCGGGATCTTCCAGCCAAC ATTGACTTGGAGTCTCTCCATTCCCTCAACTTCAGTGGATGCTCACAGTTAAGAAGTTTTCCTCATATCTCAAGGAATAT TTCACATCTCTTTCTAGATGAAACCAAGATTGAAGAAGTTCCTGAGCGGATAGAAGACATCTCTAGACTCAGTTACGTAT CGATGAAAGGTTGCAAAAGTTTAAAAAGAATATCCCCAAACATTTCGAAACTGGAGGTGATATTCTTTTCAGACTCTTAT TCTTTGGATGAACAGAGTCACTATACACAAGAATGTGCACACAAGATTAACATTCCAGTATCAAGTGGGTCTTCTTCTCG CAGTTGGAAGAATGACGTCTTCCTAAGCTTCTATGGGAAGGATGTTCGCAAAACTTTAATCAGTCACGTGTACAAGGAGT TAAGTATCAGAAAGGTCACTGCATGTACTGATGATATGCTTGTGCCAGGCAATGAGCAGCAACATGGGAGAAGAGAATCA AGAATATCTGTAGTTGTGCTTTCAAATAACTACGTGTCTTCGAGCTGGTGCTTGGATGGGTTGGTGGAGATCATAAAGTG CGGCAAAGAGATTGGTCAAGAAGTGATACCCGTTTATTACGGTGTGGAACCTGCTCATATCAGAACTCAGATCCTAGACC TTGGAAAGGCCTCCAAGAAAGGGTATACAGTAGACAATCACAAGCAACAGAAATGGGTGGAAGCTTTGACTGTATTAAAC CAACTTAAGGGATATTATTTCCCAGACTGCGACTCTGAAGCAGAGATAATTCAAAAAATGGCGGACGATATTTCTTTTGC ACTAAATATTACACCAAAAGAATATTTAGATGTGGTGGGAGCAACAATGCCTAGTAGTCTAAACCAGGAAACTGGGGAAG CACTGTACGATAGGTTAGATTGGAACGAGAAGGTTCTGTTTCGTCATATTGCTTGTTTTCTCAATAATAAGACATATGAG AATGTGATGCGGTTGCTGGAAGACAGTGAGTTGGATGTTGGAAGTGGTCTTAATATTTTGTTGCATACGTCTCTGATACG AATATCAGAAAAGAGAGTCATACGTATGAAACCTGTGCTGCAAAAATTAGGCAGAAATATAGTTCTTAGACCATTCATTA ACCAGCCTGCAAAGCGTCAATTCTTGATGGATACTAGCAAGGGTTGCGACGTTCTTATTGATCAAACTGGTAATGAGAGG ATGTTTGTCATTTCTTTTAAAGTATCAGAGACATCGAAAAGGGATGAAAGATTCAAAGGAATGAAAAAATTGCAGTTTCT GAGAATGTTCAAGAAGAGTTTGTACGGTAAACAAGTCAGAGTTCATTTAGTAAAAGGCCTCTTCTTTGTGGGAATGACTT GA |
| AA seq | Len:1014 aa MIEKIVNDVSNKLCSTACNDFDDFVGIEAHMKNMNSLLELESERVVMVGIWGPSGVGKTSIGRALFSQLSCQFQGSIFID KTKEIYTRANSYDYNTKLDLQAQFLSEILDQEDIKVHSLHTMIYRLGQKKVLVVFDDMDDQVLLDAVLGKTRWVGPRSRI VVISKDRELLRACGIESDRIYEVDYPSKELASQMFCRCAFGQDSPPDGFTELASDAVELTGNLPLALNVLGSSLAGLRKE ELEERMPKLVSRMAGQVDKTLKDSYDRLKEEDKAIFRHIACLFNHKPCDYVKGLLEDSKLDVDVGLVTLAERCLIQISED KIIRMHDFLQKMGREIVRQPCIQDPGEREFLLDSKEIYDVLVDGTGTKSVLGIFLNLREIEDELSISEEAFSGMKNLRFL RIYGVSEEDKETILQLRGGKNRRRRQLGLRKWYWWGSMHLQEGKNHIWRQLRLLEWWGCSMTSMPLNFRAENLVELRMPD SQLHKLWEGVEVLKSLKTMDLRRSKNLKVFPDLSKATSLEELYLEDCCSLVTIPSSIRSLKKLRKLDMKRCTKLRDLPAN IDLESLHSLNFSGCSQLRSFPHISRNISHLFLDETKIEEVPERIEDISRLSYVSMKGCKSLKRISPNISKLEVIFFSDSY SLDEQSHYTQECAHKINIPVSSGSSSRSWKNDVFLSFYGKDVRKTLISHVYKELSIRKVTACTDDMLVPGNEQQHGRRES RISVVVLSNNYVSSSWCLDGLVEIIKCGKEIGQEVIPVYYGVEPAHIRTQILDLGKASKKGYTVDNHKQQKWVEALTVLN QLKGYYFPDCDSEAEIIQKMADDISFALNITPKEYLDVVGATMPSSLNQETGEALYDRLDWNEKVLFRHIACFLNNKTYE NVMRLLEDSELDVGSGLNILLHTSLIRISEKRVIRMKPVLQKLGRNIVLRPFINQPAKRQFLMDTSKGCDVLIDQTGNER MFVISFKVSETSKRDERFKGMKKLQFLRMFKKSLYGKQVRVHLVKGLFFVGMT* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |