Names & Information
Knowledge of BnaA04G0116500QU:
| Gene Name | BnaA04G0116500QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA04g11150D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RML1A OS=Arabidopsis thaliana GN=RLM1A PE=3 SV=1 |
| NT seq | Len:3666 nt ATGGCTTCATCTTCTTCTTCTTCATCTTGCATCAAGAGATACCATGTCTTTCCGAGTTTCCACGGTCCAGATGTCCGTAG AGGATTTCTCAGTCATTTACGCCATCAGTTTGCAAGCAAAGGGATCACGACATTCAAAGATCATGAGATCGAGAGAGGCC ACACGATTGGACCTGAACTTGTACAAGCCATTAGAGAATCCAGAGTCTCGGTTGTTCTGCTCTCCAAGAATTATGCTTCT TCAAGCTGGTGTTTAGATGAACTGGTTGAAATCTTGAACTGCAAAAGAGTTTCAGAGCATATTGTGATGACCATCTTTTA CCAAGTTGATCCGTCCGATGTACGGAAACAGACTGGAGATTTTGGAATAGCCTTCAAGAAAACATGTGAAAAGAAAACTG AGGAAGATAAGAAGAGATGGATGGAAGCTTTGGCATATGTAGCAAACATTGCTGGAGAGCACTCTCTTAACTGGACTGAT GAAGCGGCCATGGTGGAGAAGTTTGCCACGGATGTTTCAAACAAACTGCATGTTACACGATCAAGGGACTTTGAGGAGAT TGTGGGACTGCAAGCTCACTTGAGAAAACTGATCACTTTGTTATGCTTCGAGTGTGATGAAGCAAAGATGATTGGGATTT GGGGTCCGGCGGGAATCGGTAAGTCCACCATTGCTAGAGCTTTATTCAATCACCTTTCGAGCGATTTTCGACTTACATGC TTTATGGGGAACCTCAAGGGTAGTTATAAGAGCATAATGGGTGTTGATGATTATGATTCCAAGTTAGGTTTGCAAAGCCA ACTTCTGTCTAAGGTTTTGAACCAAAATGATATGAGGGTACATCATCTAGGTGCTGTAAAAGAATGGCTACATGATCAAA GAGTGCTTATCATTCTTGATGATGTAGATGATCTAGAGGAACTAGATGTTTTGGCTAGAGAACTTTCTTGGTTTGGTTTA GGAAGTAGGATCATTGTTACAACAGAAGACAAAAAGATTTTGAAAGCACATGGAATTCAAGATGTCTACCATGTGGGTTT TCCATCTGAAAAAGAAGCTCTTGAGATCTTATGTCTATCTGCTTTCAAACAGAGATATGTACAAGATGATTTTGAAAAGG TTGCAAATAGAGTAGCATATCTTTGTGGTTATCTTCCATTAGGTCTTTGTGTTGTGGGTTCATCATTACGTGGGGAGAGC AAGGAAGAGTGGGAGCTTCAGTTATCTAGGATCGAAAATAATCTTGATAGAAAAATCGAAGACATATTAAGAGTGGGATA TGACAGATTGTCAAAGAAAGATCAAGCTCTGTTTCTCCACATCGCATGCATCTTCAACAATGGTAGAGTTGATCGTGTGA CAAGCATGCTCGCTGATAGTAATATGGATGTCGAAAATGGGCTGAAGACCCTAGCCATCAGATCTCTTGTGCAACTTGAT ATAATGTATTGTAAGATGCACTCTTTACTCCAACAGTTGGGTAGACAAGTAGTACATGAGCAGTCAGATGAGCCTGGGAA ACGTCAGTTTTTAGTGGAGGCCGAAGAGATTCGTGATGTTCTAACAAAAGAAACGGGCACTGGATCGGTCATAGGTATAT CATTTGGTATGTTCATGATGGGTGAGTTCTCAATAAGTGGACGAGCTTTCGAAGGAATGCGTAATCTTACATTTTTAGAG ATGTATAGCTCTGGGGGATTGAGGATAGCAGGGGACATGGAATATCTACCTCATCTAAGGTTACTACATTGGGATGTATA CCCTGGAAAAATTCTTCCTCCAACATTTCAGCCCCAATTTCTAGTCGAGCTATGTATGAAATTCAGCAATCTTGAGAAGC TCTGGGGAGGAATCCAGCTGCTTCCAAATCTCAAGACGTTAAATCTGGACAATTCCTATTGGTTGAAAGAAATCCCAAAT CTTTCGGAGGCTACAAATCTTGAAACAGTATCATTTACTTACTGCACAAATCTGGTGGAGCTTCCCTCCTCTATCAGGAA CCTACACAAGTTGGTTGAGTTAAACATGAGGGGCTGCGAAAAGCTACGGATTATTCCCACCAACATCAATTTAGCATCTC TTGAGTATGTTACGATGAATGGTTGCTTGCGATTGAGAACATTTCCAGATATCTCGAGGAACATCATTCGTCTTGATGTA AGGAACACAAAGATAGAAGATGTTCCTGCATCCGTAGCTGAAAGCTGGCTTTGTCTTTTCAGGTTTTATATAGGTAGCAA AAGCCTCAAAAGATTAACACACGTCCCAGAATGTGTAAGTTATTTGGATCTAAGCAACAGTGATATAAAGAAGATTCCTG ATTGCGTCATAGGTCTCCCGCATCTACTGGATCTCGCCATAAAAAACTGCAGAAAGCTGGTGTCACTGCAGGGTCTTCCG CCTTCGCTTTTGAGTCTCGATGCAACTGATTGTGTATCGCTCAAAAGCGTCTGTTTCTCCTTCTATAAACCAAAATCTGA CTATATTACTCTGGACGACTGCAAGTGTGTTAAATCAGAAAAAGATGCGATAAGAGTATCTTCCCTTTTCTACAACCCAG TGAGAGGAATCAATTTGGTCAACTGTTTATCACTAGAGGAAGAAGCAAGAAGAGTAATCATTCAACAATGTGATTACAAG AGTGTATGTTTACCAGGCAAAGAAATCCCTCCAGAGTTCACCCACAGAGCCAAAGGAAACTCCATAACCATCTCTTCAGG GACTTTCTCTGCTTCCTCAAGATTTAAGGCTTGCCTCCTGATTTCTCCAGATGCAGCCAAATTCCGGAGAGGAATTGTTT GTCGTCTAATAAGCAAAGGTGTTGTCATCAATGAACTTGAATGCAATCCGATTCATCATCATCCACTTCTATCTGAACAC CTGTTAGTCTTTTCTGGGGCCCTGTTTAAAGAGCACATATGTTGTGAACTTGACGCTACTACGAGTGAAATTCGGTTTGA ATTCAACTGCAAACATATTATTGAGTGTGGTGTCCAGATGTTGGCGGATGAAGGTGAGATAAAACTAGCTTCCTCTTTCC ACGATCCTAACAGAGAAGTGAGGTTCATCAACTGTATGAAATTAGATGAAGAAGCACGAAGAGCAATCGTACAACGATGG GCTTACAAATATGTATATTTTCCTGGTAAAGAAATCCCTGCAGAGTTCACTCACAAAGCCACAGGAAACTTGGTAACCAT CACTAAGGGGACTCTCTCTGCCTCCACAAGTTTCAGGGCTTGCATCCTGCTTTCACCACACCTACAACACCCTCCAAAGT ACTGCTATTATATCGGTTGTCGTCTAAGAAGCAAAGGTGTTCTCATCAGTGAACTTGACTGCTATCTGGATTCTCCACTC CTAACAGAACACCTATTTGTATTTCGTGGGGCTCTGCTTAAAGAACGCAGATGCGTTGATGTGGACTCGGATATTCACTT TGAATTCAGCTGCGACGAAGAACTTTTGAAGATTGTTGAGTGCGGCTTACAGATCATGGAGTACGAAGGTGAAAGTAGCA GCAGAGAATGGAAAAAGCAGAGTGATGGAGCCGTTAAGGTCTCTAAAGATAAATACGTCTTTAAAACCAATACGCATACA TGTCGGTGGAGTGGGCTTAAGAAGCTAGTTGGTCCGAGGAAGAAGAAGAAAAATAAGAGAGAGTGA |
| AA seq | Len:1222 aa MASSSSSSSCIKRYHVFPSFHGPDVRRGFLSHLRHQFASKGITTFKDHEIERGHTIGPELVQAIRESRVSVVLLSKNYAS SSWCLDELVEILNCKRVSEHIVMTIFYQVDPSDVRKQTGDFGIAFKKTCEKKTEEDKKRWMEALAYVANIAGEHSLNWTD EAAMVEKFATDVSNKLHVTRSRDFEEIVGLQAHLRKLITLLCFECDEAKMIGIWGPAGIGKSTIARALFNHLSSDFRLTC FMGNLKGSYKSIMGVDDYDSKLGLQSQLLSKVLNQNDMRVHHLGAVKEWLHDQRVLIILDDVDDLEELDVLARELSWFGL GSRIIVTTEDKKILKAHGIQDVYHVGFPSEKEALEILCLSAFKQRYVQDDFEKVANRVAYLCGYLPLGLCVVGSSLRGES KEEWELQLSRIENNLDRKIEDILRVGYDRLSKKDQALFLHIACIFNNGRVDRVTSMLADSNMDVENGLKTLAIRSLVQLD IMYCKMHSLLQQLGRQVVHEQSDEPGKRQFLVEAEEIRDVLTKETGTGSVIGISFGMFMMGEFSISGRAFEGMRNLTFLE MYSSGGLRIAGDMEYLPHLRLLHWDVYPGKILPPTFQPQFLVELCMKFSNLEKLWGGIQLLPNLKTLNLDNSYWLKEIPN LSEATNLETVSFTYCTNLVELPSSIRNLHKLVELNMRGCEKLRIIPTNINLASLEYVTMNGCLRLRTFPDISRNIIRLDV RNTKIEDVPASVAESWLCLFRFYIGSKSLKRLTHVPECVSYLDLSNSDIKKIPDCVIGLPHLLDLAIKNCRKLVSLQGLP PSLLSLDATDCVSLKSVCFSFYKPKSDYITLDDCKCVKSEKDAIRVSSLFYNPVRGINLVNCLSLEEEARRVIIQQCDYK SVCLPGKEIPPEFTHRAKGNSITISSGTFSASSRFKACLLISPDAAKFRRGIVCRLISKGVVINELECNPIHHHPLLSEH LLVFSGALFKEHICCELDATTSEIRFEFNCKHIIECGVQMLADEGEIKLASSFHDPNREVRFINCMKLDEEARRAIVQRW AYKYVYFPGKEIPAEFTHKATGNLVTITKGTLSASTSFRACILLSPHLQHPPKYCYYIGCRLRSKGVLISELDCYLDSPL LTEHLFVFRGALLKERRCVDVDSDIHFEFSCDEELLKIVECGLQIMEYEGESSSREWKKQSDGAVKVSKDKYVFKTNTHT CRWSGLKKLVGPRKKKKNKRE* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |