Names & Information
Knowledge of BnaA04G0116700QU:
| Gene Name | BnaA04G0116700QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA04g11170D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RML1B OS=Arabidopsis thaliana GN=RLM1B PE=2 SV=1 |
| NT seq | Len:4077 nt ATGGCGTCTTCTTCTTCTGCCGTAAATATATTCCATGTCTTCACCAGCTTTCACGGCCCAGATGTCCGTCGAGGATTTCT CAGTCACTTACAGTATTACTTTGAAACCAAAGGGATCAAAATGTTCAAAGACCAGAAGATCGACAGAGGCTATTCCATCA AACCTGAACTCTTTAAAGCAATTGGAGAATCCAGGGTCTGCCTCGTTCTCCTCTCCAAGAACTACGCTTCTTCGGGCTGG TGTTTAGACGAATTGGCTGAAATCATGAGATGCAGAGAGACTTCAGGGAAGATTGTGATGACGATATTTTACGAAGTTGA TCCGTCCAGTGTTCGAAAACAGAAGGGAGACTTCGGGAGCACTTTCATGAAAACTTGTCAAGGGAAAGATGAGGAAGTGA AGGAGAGATGGAGCAAAGCCTTGACTGATGTGGCAAACATTGAAGGAGAACATTCTGACAATTGGCCAACCGAAGCAGAG ATGATCCAGCAGATTGCTATAGATGTTTCAAACAAACTGAATCTTACTCCTTCAAGGGATTTTGATGGGATGGTTGGACT TGAAGCTCACTTGACAAGTCTGAAGTCTTTGTTATGCCTGGAGTGTGACGATGTGAAGATGATTGGAATCTGGGGTCCTG CTGGAATTGGTAAGACTACCATTGCTCGAGCTTTATACGAACAACCCTCTAGCAGTTTTAGTTTTAAATGTTTTATGGAG GATCTTAAGGGAATTTATAAGAGCAATGGTAACTATGATTCCAAATTGGGTTTGCAAAGACTACTTCTGTCTAGGATTTT GAACGATAGTGATATAAAGGTACATCATCTAGGTGCAATAAAACATTGGCTACATAATCAAAGAGTGCTTATCATTCTTG ATGATGTAGATGATCTAGAGATACTAGATGTGTTGGCCAAAGAACTTTCTTGGTTTGGTCCTGGGAGTAGGATCATTGTT ACCACAGAAGATAGACAGATTTTGAGAGCACATGGGATCGATGATATCTACAGTGTGGATTTTCCATCGGAAGAAGAAGC TCGTGAGATCTTATGTTTATCTGCTTTCAAGGGAGCCTCTGTACGAGATGGTTTTGAAGAGCTTGTAGATAAGGTAGCAG GGTTTTGTAGTAATCTTCCATTAGGCCTTGCTGTTGTGGGTTCGTCTTTGCGTGGGGAGAGCAAGACCGACTGGGAACGT CAGTTATCTAAGATCGAAACTGGTCTCGATAGAAAAATTGAAGATGTGTTAAGAGTGGGTTATGACAGATTGTCCAAGAA AGATCAAGCTCTGTTTCTCCACATTGCATGCTTCTTTTTCTTCCACGAGGATGTTGATCGTTTGACAACCATGCTCGCTC ACAGTAACTTGAATGTTGGAAATGGGCTTAAGACCTTAGAGGAGAAGTCTATGGTGCATCGATCTTTTTATAGAGAGATA GTGATGCACTCTCTACTTCAAAATTTGGGTAGACAAATAGTTGTCGAACAGTCTGAGGAGCCCGGGAAACGTCAGTTTTT AATAGAGCCCAAAGATATTTCTAATGTACTGGCGAATAACACAGGTACTGAATCTCTTATAGGTATAAAATTTGATATGA GTAACATGGAGAAGTTTAGTATAAGTGAGGGAGCCTTTGAAGGAATGAGCAGTCTCCAGTTCTTACAGATTTACTCACAA CTGGGCCAGCAAAACGAAAATGTTAGCTGCCTACGCATACAGGAGGACTTGAAATATCTACCTCGTCTAAGGTTACTAAA TTGGGATTTTTACCCGGGAAAACGTCTTCCTCCAACATTTCAGCCGGAACGTCTTGTTGAACTCGGTCTGCAATTTAGCA ATCTCGAGAAGCTCTGGGATGGAATACAGCCACTTGCAAATCTCAAGAAGATGGATTTGAACTTCTCCTATAGGTTGAAA GAAATCCCAAATCTTTCAAAGGCTACTAATCTTGAGACGCTGTTACTTTCTTCTTGCTCAAGTTTGGTGGAGCTTCCCTC CTCTATCAAGAATCTACACAAACTGAAAAAGTTGAAGATGAAGAGCTGCAAAAAGCTACGACTTATTCCCACAAACATCA ACTTAATATCGCTTAAGGGAGTCGACATGGATTATTGCTCGCAATTGGAAACTTTTCCAGATATCTCGCGGAACATCAAG ACTCTCAGCGCAAGAGACACAAAGATAAAAGACGTCCCTGCATCAGTTGTTGGACGTTGGTCTCGTTGTCGGAAGCTTGA GATAAGCCTCGAGAGATTAACACATGTCCCACAAGGTGTAACGAAGCTAGACCTAATCAACAGTGCCATAAAGAGGATTC CAGAGTGCATCACTGGTCTCTCGCATCTAGTGGATCTCATCGTCGAAAACTGCACAAACCTCGGGTCAATTCCGGCTCTT CCCCCTTCGCTCAAGTCCCTGAATGCAAACAGTTGTGTATCACTCAAGACAGTAGATTGCTCTTTCCACAACCCAGTCAA TGTCCTCACGTTCTACAACTGTGTGGAACTGGATGAAGATGCAAGAAGAGGAATCATACAACAATCGGTTCAGGAGTATC TATGCTTACCAGGTAAAGAAGTCCCTGCAGAGTTCACTTACAAAGCCACAGGAAAGTCCATAACCATCCCTCTGGCTCCC GGTGGTGAGGGAGCTTTCTCAGCTTCCTCAAGATTTAAGGCTTGCTTCCTGCTTTCACCAATCAAGAACCACCGATTTCT TTCTATAAGTTGTCGTCTAAGAGGCAAAGGAGGTGTCGAAATTAACAGCTTTTCCAGTGGTGCACGGCTTGGCGATCTGT CTCCTCTATCAGAGCATCTGTTTATATTTCATGGTGACTTGTTTGATCGACCAAACAGGCACCATGAAGTCGAAGTGGCA GCAAGCGAAATTTCATTTGAGTTCAGCTGCAGGTCCAACGATGACAAGATTATTGAGTGTGGTGTACAAATCTTGACGGA GGAAGCTGAGGGTAGCAGCAGCGAAAGAGAATTAGAGAACTTTGAAACTGAGACTAACATCACCGATGGTGGCTATGGCA GCGACGATGGTGGCTATGAATTAGTATCGATGCTTCTCTCTGTATGTAAAGGCACTAAAATGCAGAAGGCTGAGGGTATT CTCGCTCTATGTAAATACGTTAAAATGCAGGATGGTGATGAGGGCAGCAGCAGCAGCAGCGAAGTGGAAAACTTTGAAGA GGAAAAAGAGATGATTAACTCAATATTTGAATACCTTAAAAAGAAGGAAGTGGAAAACATTCAAAATGAGGGTAACAGTT TCGACGCGAGCGATGAATTAGTACTATCGTTGACTTTCTCTGTATGTCAATACATTGAAAAGAAGGAAGCTGAGGGTAGC AGCGAAGTGAACAGCAGCAACGCCAGCAAGGAATTAGTACTAGCTATGCTTTACTTGGTAGGTAAATACATTGAAAAGAA GGAAGCTGAGGGTAGCAGCAGCGAAGTGAACAACGGCCACGAGAGCAATGAAATAGTACTAAAAAGGATTGTTTTCTCTC TACTTATATACATTAAAGTGAAGGAGGTTGACGGTAGCAGCAGCATCAACAGGGGCGATGCGAGCAAGGAATTAGTACTA CCGGTTTTTCTCTATCTATGTGAATACATTAAAAAGAAGGAAGCTGAGGGTAACAGTAGCAACAACCAAGTGAACAATGG CGATGCGAGCAATGAATTACTACTAGCGATGATTCTCTCTGCAAGTGAAAAAATTGAAACGCAGGAAGCTGAGGTTATTC TCTCTCAGTGTGAAGACATTATAAAGGAGGATGCTGAAGGTAGCAGCAGCAGCAACAGCGAAGTGAATAGCGACCATGCG AGCAATAAATTAGTACTATCGATTATTCTCCGTGTATTTCAATACATTATAAAGAAGGAAGCAGAAGGTACCAGTAGCAA AAGAGAAGAGGAAAACCAGAGTGACGGAGCCTTTAAAGTCTCTATAGACGAAAACGTCGTCAAAACCAATAAGCATACAA ATTGGTTGAGTGGACTTAAGAAGCTAGTTGGTCTGAAGAAGAAGAAGAATAAGCCGGAAGAACTTTTAGATCCATAA |
| AA seq | Len:1359 aa MASSSSAVNIFHVFTSFHGPDVRRGFLSHLQYYFETKGIKMFKDQKIDRGYSIKPELFKAIGESRVCLVLLSKNYASSGW CLDELAEIMRCRETSGKIVMTIFYEVDPSSVRKQKGDFGSTFMKTCQGKDEEVKERWSKALTDVANIEGEHSDNWPTEAE MIQQIAIDVSNKLNLTPSRDFDGMVGLEAHLTSLKSLLCLECDDVKMIGIWGPAGIGKTTIARALYEQPSSSFSFKCFME DLKGIYKSNGNYDSKLGLQRLLLSRILNDSDIKVHHLGAIKHWLHNQRVLIILDDVDDLEILDVLAKELSWFGPGSRIIV TTEDRQILRAHGIDDIYSVDFPSEEEAREILCLSAFKGASVRDGFEELVDKVAGFCSNLPLGLAVVGSSLRGESKTDWER QLSKIETGLDRKIEDVLRVGYDRLSKKDQALFLHIACFFFFHEDVDRLTTMLAHSNLNVGNGLKTLEEKSMVHRSFYREI VMHSLLQNLGRQIVVEQSEEPGKRQFLIEPKDISNVLANNTGTESLIGIKFDMSNMEKFSISEGAFEGMSSLQFLQIYSQ LGQQNENVSCLRIQEDLKYLPRLRLLNWDFYPGKRLPPTFQPERLVELGLQFSNLEKLWDGIQPLANLKKMDLNFSYRLK EIPNLSKATNLETLLLSSCSSLVELPSSIKNLHKLKKLKMKSCKKLRLIPTNINLISLKGVDMDYCSQLETFPDISRNIK TLSARDTKIKDVPASVVGRWSRCRKLEISLERLTHVPQGVTKLDLINSAIKRIPECITGLSHLVDLIVENCTNLGSIPAL PPSLKSLNANSCVSLKTVDCSFHNPVNVLTFYNCVELDEDARRGIIQQSVQEYLCLPGKEVPAEFTYKATGKSITIPLAP GGEGAFSASSRFKACFLLSPIKNHRFLSISCRLRGKGGVEINSFSSGARLGDLSPLSEHLFIFHGDLFDRPNRHHEVEVA ASEISFEFSCRSNDDKIIECGVQILTEEAEGSSSERELENFETETNITDGGYGSDDGGYELVSMLLSVCKGTKMQKAEGI LALCKYVKMQDGDEGSSSSSEVENFEEEKEMINSIFEYLKKKEVENIQNEGNSFDASDELVLSLTFSVCQYIEKKEAEGS SEVNSSNASKELVLAMLYLVGKYIEKKEAEGSSSEVNNGHESNEIVLKRIVFSLLIYIKVKEVDGSSSINRGDASKELVL PVFLYLCEYIKKKEAEGNSSNNQVNNGDASNELLLAMILSASEKIETQEAEVILSQCEDIIKEDAEGSSSSNSEVNSDHA SNKLVLSIILRVFQYIIKKEAEGTSSKREEENQSDGAFKVSIDENVVKTNKHTNWLSGLKKLVGLKKKKNKPEELLDP* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |