Names & Information
Knowledge of BnaA05G0128000QU:
| Gene Name | BnaA05G0128000QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA05g12020D [Brassica napus] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1 |
| NT seq | Len:3111 nt ATGAACCCTCCTAGGGATTTAGTCGGGCCTCCAGTACTGAAGCTTCGTTTCATAAACTCGCCGCCACCGACGATATTCAC GGATTCAAGGATCATGGGGGAGGACGGTACTCCATTAAAAATCGAGCTCGTTGACGCCTCCACGAACACGCGAATCCACA GTTTCTTTCCGCTCGATATCGTACTGCTGAACGCCGATATTAGGGAAGAAGGCTGGAGCAAGGAGGAATTTTACCGGAAT ATACTCCGGCCACGCAAAGGGAAACGAGCGTTGCTCGTCGGAGATCTGACCGTGACACTTGAACACGGGTTAGGAATGAT CAGCGGCAACGTTGCTTTCACAGGTAACTCGAGGAGCCGGAAGTTCCGATTAGGGGCTAAATTGACTCAAGGAGGAAATG TTCAAGGGGCCATAACCAAAACGTTTTCGTGCATAGATAAACGAGGAAAATCTTCTCACAAACAATATTCTGCTTCTAAG GTCTCGAAGCTAGCCCGTGGAAGTGTGGTGGATATGCAGCAGGACGGGTTACATAACTCTGTTTACAATGGCGTGAATCT GCTGCAAGAAGACGAATTAAGCATTATTGGATTTAACGAGTTTCAGAGTGGACCAGTTTCTGATGCAAGTGACACATCTG CTACCTTTCCTGCATCTAAAGATTATGATGTTGTAATCAGACATGGAGGAAACAATGATTTTATCAGCCATCTTCGTGCT GCCCTCTCCCGGAGAGGGATCTCTGTCCATGAAGACGTTGAAGAAACGACGGATGCTGCAGTTCCGGAATGCAGGGTTTT GATCATATTCTTAACGACCACATACGTCCCTTCCAACCTCTTAAACATTCTTCAACACCAACGACAAGAGTCTCTGATGG TTTATCCTATTTTTTATGGAATATCGCCCTCTGATTTGATCACTAACAGCAACTACTATGAGAATTTTTTCCCCCAAGAC GAGTCGGAACGGTGTCAAGCTGCTTTGAAGGAAATAACTCAGATGCCTCGCTACATATTGATAGACAAGTACGAGTCCGA ACTTATTGATGAGATTGTCAGAGATGCATTGAAGGTGATATATTCCACTGAACATGAGAAAATGATTGGGATGGATATGC AGATAAAGGAGATTGTATCACTACTATGCATTGAATCCCCAGATGTTCGCAGCGTAGGTATATGGGGTGCCGTTGGTATA GGAAAGACAGCCCTTGCTGAAGAAATCTTTTGCAGAATCTCAGTCCAGTTTGTGACTTGTGTCTTCCTCAAGGACCTTCA TAAAGAAGTACAAGTAAAAGGTCAGGATGCTCTTAGAGAGGACTTCTTGTCTAAAGTTCTAGAAGTAGAACCACATGTTA TTCGGGTTTCTGGCATGGAAACAAGTTTCTTGAGGAGTAGGGTTCAACGTAAAAAGGTCCTCGTAGTTCTCGACGATGTG AATGATTTCAGAGATGTTGAAATCTTTCTGGAGGAGCTTAGCTATTTGGGTCCTGGAAGCAGAATAATCATAACCTCGAG GGACAAACGCGTTTTCGTGCTATGTAAAACTGATCATGTCTACGAGGGCACATCAGCTATTGAAGGCATTTTTTTGGACA TGTCGCAGCTGAAATTCGATGCAAGACCTATTGTGTTTATGAAAATGTGTAACCTTAGACTTTTAAAGCTTTGTTTCTCC AAAGTGAAAGAGAACAATGGAGTGTGTTTACCTCAAGGTCTTGAATACTTGCCGAGGAAGCTAAGGCTTCTGCACTGGGA ATATTATCCTCTAAGCTCATTACCGCAAACTTTTGATCCAAAGAACCTCGTAGAGCTCAACTTGCCAAATAGTTGCGCGA AGAAACTTTGGAAAGGGAAAAAGGTAATGTTCAAGATTAATAGTCTGGAAAAGCTTAAAAAGTTGAGACTAAGCCACTCC TACCATTTAACAAAAATCCCAAGACTTTCAAGTGCGCCGAATCTTGAACTTCTTGATTTGGAAGGTTGCAACAGTTTGCT CGATCTAGAAAACAGCAAATACCTTAAGGTTCTTCCAACCAGCATCTGCAAGTTGAAGCATCTTGAAACACTGAATCTGT CAGACTGCTCAAGGCTTGAGCGGTTTCCAGACTTGAATAGAAAGATGAAATGCTTTAAGTGTCTGGATTTAAGCAGGACG ACCATTAAAGAGCTACCCTCTTCCATTTCATATCTGACTGCTCTTGAAGAACTGAGGCTTGTGGAGTGCAAGAGCCTCGT TAGATTGCCTGATAACGCGTGGAGCCTAAGATTCAAGCGGATTATGTTTCGAAACCCTCAAAAAGCAAATATGCAATCAA ACGAAGAAGAATTCGTAAGGTTTCTAGGAGAAGGCTCCTTTGGTTGCGTTAATCTCGTCCGATACTCTAATTCCAACGAC GACGGCTCTTCGTACCTCTCCGCCGACAAGAACTCTTACGAAGAAGACTACGACAGTCTCAAAAGCTCGAGTAGTTTAAG CGCTTTCATGGACAAATACGCCGACCGAAAGTTGCCGGAACCGTTGATCAAAGATTTCACGTGGATGGTTCTCGAAGGTT ACGAGATCAAGATTTCCGATTTCGGTAGCGCGTTAGATGTGGGAGAGGTTCCCAAGTTCTGGGAAACTAATATGCCGTGG ATGGGGACTCCGATCTACATGTCGCCGGAGTCGATCCGTGACGGCGTGGCCGACATGTCTCTAGACTTGTGGTCGGTGGG ATGTTTGGTACTGGAGATGTACACGGTCGTGATTCCATGGGAAGGTGTTAATCTCGATCTTCTAGCTACTCTTCTCCGTT GTGGTGCTGCTCCTGAGATCCCAGAGAGTTTACCTTCCGATGCAAAGGAATTTATCCAAACAGATGCTGATCAATTCCGA CAGTGGAAAGCTTCTCAAGAAAAGGAATTATTGCAGGTTCTTCATAGAAAAACAGAGGAAGCAACAATGGCTACCAAGAA ACTTAAGGAGCTGCTGGAATCTCGCAAGTCATCAGTGGCTGGCAATGGTCAACCACCAACTAAAAAGGTGATAAAATCTC CTAATTTAGATATGGGTCCCACCATCCAGCACAAGTGTCAACTCTTTCCTTTTCATACTCTTTGCGGGTGA |
| AA seq | Len:1037 aa MNPPRDLVGPPVLKLRFINSPPPTIFTDSRIMGEDGTPLKIELVDASTNTRIHSFFPLDIVLLNADIREEGWSKEEFYRN ILRPRKGKRALLVGDLTVTLEHGLGMISGNVAFTGNSRSRKFRLGAKLTQGGNVQGAITKTFSCIDKRGKSSHKQYSASK VSKLARGSVVDMQQDGLHNSVYNGVNLLQEDELSIIGFNEFQSGPVSDASDTSATFPASKDYDVVIRHGGNNDFISHLRA ALSRRGISVHEDVEETTDAAVPECRVLIIFLTTTYVPSNLLNILQHQRQESLMVYPIFYGISPSDLITNSNYYENFFPQD ESERCQAALKEITQMPRYILIDKYESELIDEIVRDALKVIYSTEHEKMIGMDMQIKEIVSLLCIESPDVRSVGIWGAVGI GKTALAEEIFCRISVQFVTCVFLKDLHKEVQVKGQDALREDFLSKVLEVEPHVIRVSGMETSFLRSRVQRKKVLVVLDDV NDFRDVEIFLEELSYLGPGSRIIITSRDKRVFVLCKTDHVYEGTSAIEGIFLDMSQLKFDARPIVFMKMCNLRLLKLCFS KVKENNGVCLPQGLEYLPRKLRLLHWEYYPLSSLPQTFDPKNLVELNLPNSCAKKLWKGKKVMFKINSLEKLKKLRLSHS YHLTKIPRLSSAPNLELLDLEGCNSLLDLENSKYLKVLPTSICKLKHLETLNLSDCSRLERFPDLNRKMKCFKCLDLSRT TIKELPSSISYLTALEELRLVECKSLVRLPDNAWSLRFKRIMFRNPQKANMQSNEEEFVRFLGEGSFGCVNLVRYSNSND DGSSYLSADKNSYEEDYDSLKSSSSLSAFMDKYADRKLPEPLIKDFTWMVLEGYEIKISDFGSALDVGEVPKFWETNMPW MGTPIYMSPESIRDGVADMSLDLWSVGCLVLEMYTVVIPWEGVNLDLLATLLRCGAAPEIPESLPSDAKEFIQTDADQFR QWKASQEKELLQVLHRKTEEATMATKKLKELLESRKSSVAGNGQPPTKKVIKSPNLDMGPTIQHKCQLFPFHTLCG* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0004672 |
| Pfam | Leucine Rich Repeat |
| KEGG | probable WRKY transcription factor 19-like; K19613 leucine-rich repeat protein SHOC2 (A) |