Names & Information
Knowledge of BnaA05G0128100QU:
| Gene Name | BnaA05G0128100QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA05g12030D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
| NT seq | Len:2316 nt ATGTTATCTCCCATGGCAATGGTGCCTTCTTCCTCTGAAGAGTACGATGTATTTCTAAGTTTCAGAGGCGTTGACACACG CTATAACTTTACCAGCCATCTCGATAAAGCCCTCCGCCTGAGAGGAATCAAGTCCTTCATCGACGACGAACTCCATCGAG GGGACAATATCACTGCGCTTTTCCCCATAATCAAGCAATCCAAGATTGCAATCATCGTCTTCTCCGAAAACTACTCCAAC TCCAGGTGGTGTCTCCGAGAGCTTGTGGAGATCCTCGAGTGCAGGGACAGAAACCAACAGGTGGTGCTCCCTATCTTCTA CAAAGTCGACAAATCAGAGTTGAAGAAGGTCCTGAGAGAGAGCTTTAGGGAGGAGGAGAAGATTTCGTCGTGGGAAGCTG CACTGACCACAGCATTCAACATCTCCGGCTATGTAGTCAATGAATCTAGCACCTCTGAGGCCACACTTGTGGATGAGATT GCTGTTGACACATTAAAGAAGCTGGATGGCTTGGCTCCCATCGGGAACAACGAAGGTCTCGTGGGAGTAGAATCCAGACT AAAGATTCTAGAAAAACTTTTATCTTGCGATGAGTTGGATTCTGTTCATATCATAGGCATTATTGGAATGGGTGGGATTG GTAAAACTACTCTTGCTGATTGTTTGTATAGACGGATGCGACGTCATTTCGACGGCAGCTGCTTTCTTACAAACATCCGT GAGAATTCAAGTAGAAATGGGTTAGAATCTCTGCTGCAGAAACTCTTCTCTACGTTACTGAATGATAGAGAGATAGAGAT TGGAGCTCCTGGAAATGCACATGAGAGATTTGGCCGCAGGCTTAAGACCAAGAGGCTTCTTATTGTCCTTGATGATGTCA GTGATGAAAAGCAGATACGGTATCTTATGGGGCACTCCAAATGGTGTCAAGGGGGAAGTAGGATCATCATAACCACAAGA GACAGTAAGCTGATCCAAGGCCGGAAATATGTGCTCCCTAAATTGAATGATAGAGAAGCTTTGAAGCTCTTTAGCATGAA AGCCTTTAATAAATCTTGCCCTTCCGCCGAGTTTGAGAGCTTGGCAAATATGGTCCTGGACTATGCTAAAGGCAACCCTT TGGCTCTTAAGATGTTAGGATCTGATCTTTACAATAGGGATGCTCTGTACTGGGAAGATAAATTGGATAAACTGACAAGT AGATCGCATAAATATATCTACGAAGTTCTGGAAACAAGCTATGAGGAGCTTACCACTGAGCAGAAGAATGTTTTTCTGGA TATTGCATGTTTCTTCAGATCAGAGAAGGTTGATTACGTGAAAAGCCTTCTCAACAATCATGGTGTGGATGTGTCTAGAG TGATAGATGATCTACTTGACAAATGTCTGATTACTCTTTCTGGTAACCGCATCGAGATGCATGACATGTTACAGACTATG GGCAAGGAGATTAGCCTATATCAGTCGCATATCAGACTATTGGACAGTGACGCTATTTGTGACCGTCTTACCAACGGCAT AGGAACTGGCAATATAAGAGGCATTTTCCTGGACACATCAAAACTAGGAGCAATGCGTCTAAGGGCCAAAGCTTTCAAAG GAATGTACAACCTCAAATACCTGAAAATTTATGATTCTCGTTGTTCTCGTGGATGTGAATCGGAGGTTAAACTGCACTTC CGGGAAGGGCTTGACTTCCTTCCTAATGGGCTTAAGTATCTACACTGGCATGGATACCCGCTACAGAGTATCCCTGACAT CGACCTCAAGAACCTTGTAGACCTTAAATTGCCACATAGTAAACTAGAAGAAATATGGGATGGAGACAAGTGCTCTGGCA AATTCGAGAACCAAGACAGTTCATCTACAGTATTTGATTTCACTCTCGCAGGCTGGAACGAACCGTGTAAAACGCTTAGC CATGAACCAAGAAAACTCACTTCTGACCATGTTTTCATGGGATACAACAGTTTTTTCCACGTCGAGCAACTCCATGAAGA GAGTAACAGTTGCTGTCACACAAAGGCTTCTTTCGAATTCTATGCGACGGATAATGAAACGAAGAAGAAGCTGGAGACTT GTAAGGTGATAAAATGTGGGATGAGTTTAGTGTATGTTCCTGATGATGAGGATGGTATGTTGTTGAAGAAGACAAATGTT GCTCAGTTGAGTTCGCAGACCGAACAAAGCTGTTCCAACGGTCTTGATGATGTTAGACTCAAGAGAGGACGATGCAATTT CGGTGGTGGTGGTGGTGGTGGTGATGAAGAATCAGAGTGTAAGAAAACAAAGGAGGACAAGATTTTGGTGTTATAA |
| AA seq | Len:772 aa MLSPMAMVPSSSEEYDVFLSFRGVDTRYNFTSHLDKALRLRGIKSFIDDELHRGDNITALFPIIKQSKIAIIVFSENYSN SRWCLRELVEILECRDRNQQVVLPIFYKVDKSELKKVLRESFREEEKISSWEAALTTAFNISGYVVNESSTSEATLVDEI AVDTLKKLDGLAPIGNNEGLVGVESRLKILEKLLSCDELDSVHIIGIIGMGGIGKTTLADCLYRRMRRHFDGSCFLTNIR ENSSRNGLESLLQKLFSTLLNDREIEIGAPGNAHERFGRRLKTKRLLIVLDDVSDEKQIRYLMGHSKWCQGGSRIIITTR DSKLIQGRKYVLPKLNDREALKLFSMKAFNKSCPSAEFESLANMVLDYAKGNPLALKMLGSDLYNRDALYWEDKLDKLTS RSHKYIYEVLETSYEELTTEQKNVFLDIACFFRSEKVDYVKSLLNNHGVDVSRVIDDLLDKCLITLSGNRIEMHDMLQTM GKEISLYQSHIRLLDSDAICDRLTNGIGTGNIRGIFLDTSKLGAMRLRAKAFKGMYNLKYLKIYDSRCSRGCESEVKLHF REGLDFLPNGLKYLHWHGYPLQSIPDIDLKNLVDLKLPHSKLEEIWDGDKCSGKFENQDSSSTVFDFTLAGWNEPCKTLS HEPRKLTSDHVFMGYNSFFHVEQLHEESNSCCHTKASFEFYATDNETKKKLETCKVIKCGMSLVYVPDDEDGMLLKKTNV AQLSSQTEQSCSNGLDDVRLKRGRCNFGGGGGGGDEESECKKTKEDKILVL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A) |