Names & Information
Knowledge of BnaA05G0132800ZS:
| Gene Name | BnaA05G0132800ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA05g12020D [Brassica napus] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1 |
| NT seq | Len:3144 nt ATGCTCGAGACCGGCCCTGTAAGGAAGAAACCATCTTCGGTTTCAGAAGATATCAAGAGCATGAACCCTCCTAGGGATTT AGTCGGGCCTCCAGTACTGAAGCTTCGTTTCATAAACTCGCCGCCACCGACGATATTCACGGATTCAAGGATCATGGGGG AGGACGGTACTCCATTAAAAATCGAGCTCGTTGACGCCTCCACGAACACGCGAATCCACAGTTTCTTTCCGCTCGATATC GTACTGCTGAACGCCGATATTAGGGAAGAAGGCTGGAGCAAGGAGGAATTTTACCGGAATATACTCCGGCCACGCAAAGG GAAACGAGCGTTGCTCGTCGGAGATCTGACCGTGACACTTGAACACGGGTTAGGAATGATCAGCGGCAACGTTGCTTTCA CAGGTAACTCGAGGAGCCGGAAGTTCCGATTAGGGGCTAAATTGACTCAAGGAGGAAATGTTCAAGGGGCCATAACCAAA ACGTTTTCGTGCATAGATAAACGAGGAAAATCTTCTCACAAACAATATTCTGCTTCTAAGGTCTCGAAGCTAGCCCGTGG AAGTGTGGTGGATATGCAGCAGGACGGGTTACATAACTCTGTTTACAATGGCGTGAATCTGCTGCAAGAAGACGAATTAA GCATTATTGGATTTAACGAGTTTCAGAGTGGACCAGTTTCTGATGCAAGTGACACATCTGCTACCTTTCCTGCATCTAAA GATTATGATGTTGTAATCAGACATGGAGGAAACAATGATTTTATCAGCCATCTTCGTGCTGCCCTCTCCCGGAGAGGGAT CTCTGTCCATGAAGACGTTGAAGAAACGACGGATGCTGCAGTTCCGGAATGCAGGGTTTTGATCATATTCTTAACGACCA CATACGTCCCTTCCAACCTCTTAAACATTCTTCAACACCAACGACAAGAGTCTCTGATGGTTTATCCTATTTTTTATGGA ATATCGCCCTCTGATTTGATCACTAACAGCAACTACTATGAGAATTTTTTCCCCCAAGACGAGTCGGAACGGTGTCAAGC TGCTTTGAAGGAAATAACTCAGATGCCTCGCTACATATTGATAGACAAGTACGAGTCCGAACTTATTGATGAGATTGTCA GAGATGCATTGAAGGTGATATATTCCACTGAACATGAGAAAATGATTGGGATGGATATGCAGATAAAGGAGATTGTATCA CTACTATGCATTGAATCCCCAGATGTTCGCAGCGTAGGTATATGGGGTGCCGTTGGTATAGGAAAGACAGCCCTTGCTGA AGAAATCTTTTGCAGAATCTCAGTCCAGTTTGTGACTTGTGTCTTCCTCAAGGACCTTCATAAAGAAGTACAAGTAAAAG GTCAGGATGCTCTTAGAGAGGACTTCTTGTCTAAAGTTCTAGAAGTAGAACCACATGTTATTCGGGTTTCTGGCATGGAA ACAAGTTTCTTGAGGAGTAGGGTTCAACGTAAAAAGGTCCTCGTAGTTCTCGACGATGTGAATGATTTCAGAGATGTTGA AATCTTTCTGGAGGAGCTTAGCTATTTGGGTCCTGGAAGCAGAATAATCATAACCTCGAGGGACAAACGCGTTTTCGTGC TATGTAAAACTGATCATGTCTACGAGGTCAAGCCATTAGACTTTTCTAAGTCTCTACAAATACTAGATCGTAGAATATAT TCACCTGAGCTTGTCAAATTCTCAAATGGGAATCCACAGGTTCTTCAGTTCTTAAGCAGATCGAACAGAGAATGGAAACG GTTGTCACAAGAAATTCAGAGTTCCTCTCCCATTTACATTCAAGGTATATTCGAAAGAAGCTGTTGTGGGCTTGATGACA TCGAAAGAAGTATTTTTTTGGACATTGCATGTTTCTTCAAAAGAATGAATAAAAACGATGTTGCACTGTTGCTTGATGGA CGTGATTTCTCTCCGCATGTTGGATTTAGAAGCCTTGTTGACAAATCACTGTTAACCATATCACACAATATGGTGGACAT GCCCGTTTTTCTCCAGGCAACGGGTCGAGAAATTGTTCGCCAAGAATCAGTTGACAGGCCAGGAGACCGCAGCAGGTTGT GGAATGCCGAAGATATTAGGGACGTGTTCATAGATAACACTGGCACATCAGCTATTGAAGGCATTTTTTTGGACATGTCG CAGCTGAAATTCGATGCAAGACCTATTGTGTTTATGAAAATGTGTAACCTTAGACTTTTAAAGCTTTGTTTCTCCAAAGT GAAAGAGAACAATGGAGTGTGTTTACCTCAAGGTCTTGAATACTTGCCGAGGAAGCTAAGGCTTCTGCACTGGGAATATT ATCCTCTAAGCTCATTACCGCAAACTTTTGATCCAAAGAACCTCGTAGAGCTCAACTTGCCAAATAGTTGCGCGAAGAAA CTTTGGAAAGGGAAAAAGAGTCTGGAAAAGCTTAAAAAGTTGAGACTAAGCCACTCCTACCATTTAACAAAAATCCCAAG ACTTTCAAGTGCGCCGAATCTTGAACTTCTTGATTTGGAAGGTTGCAACAGTTTGGTGAGTATTAGCCAGTCTATATGCC ATCTTAAAAAGCTTGTTTTTCTGAATCTGAAGGATTGCTCCAATCTGGAGAGTGTACCATCTACGGTTGATTTAGAGTCT CTTGAGGTTTTGAATCTTTCTGGCTGCTCGAAGCTTGAGAATTTCCCAGAGATCTCACCAAATGTAAAAGAACTGTACTT GGGTGGGACTATGATACAAGAAATGCCATCATCTATCAAGAACCTTGTATTGCTTGAGAAGCTGGATCTAGAAAACAGCA AATACCTTAAGGTTCTTCCAACCAGCATCTGCAAGTTGAAGCATCTTGAAACACTGAATCTGTCAGACTGCTCAAGGCTT GAGCGGTTTCCAGACTTGAATAGAAAGATGAAATGCTTTAAGTGTCTGGATTTAAGCAGGACGACCATTAAAGAGCTACC CTCTTCCATTTCATATCTGACTGCTCTTGAAGAACTGAGGCTTGTGGAGTGCAAGAGCCTCGTTAGATTGCCTGATAACG CGTGGAGCCTAAGATTCAAGGTTGAATTTCGCCAGATTGACACAGACAAGTTTTCAAAACTGTGGAATAGATTTGCGTGG CTCAAGAAAGTTCAGATCTCTTAG |
| AA seq | Len:1048 aa MLETGPVRKKPSSVSEDIKSMNPPRDLVGPPVLKLRFINSPPPTIFTDSRIMGEDGTPLKIELVDASTNTRIHSFFPLDI VLLNADIREEGWSKEEFYRNILRPRKGKRALLVGDLTVTLEHGLGMISGNVAFTGNSRSRKFRLGAKLTQGGNVQGAITK TFSCIDKRGKSSHKQYSASKVSKLARGSVVDMQQDGLHNSVYNGVNLLQEDELSIIGFNEFQSGPVSDASDTSATFPASK DYDVVIRHGGNNDFISHLRAALSRRGISVHEDVEETTDAAVPECRVLIIFLTTTYVPSNLLNILQHQRQESLMVYPIFYG ISPSDLITNSNYYENFFPQDESERCQAALKEITQMPRYILIDKYESELIDEIVRDALKVIYSTEHEKMIGMDMQIKEIVS LLCIESPDVRSVGIWGAVGIGKTALAEEIFCRISVQFVTCVFLKDLHKEVQVKGQDALREDFLSKVLEVEPHVIRVSGME TSFLRSRVQRKKVLVVLDDVNDFRDVEIFLEELSYLGPGSRIIITSRDKRVFVLCKTDHVYEVKPLDFSKSLQILDRRIY SPELVKFSNGNPQVLQFLSRSNREWKRLSQEIQSSSPIYIQGIFERSCCGLDDIERSIFLDIACFFKRMNKNDVALLLDG RDFSPHVGFRSLVDKSLLTISHNMVDMPVFLQATGREIVRQESVDRPGDRSRLWNAEDIRDVFIDNTGTSAIEGIFLDMS QLKFDARPIVFMKMCNLRLLKLCFSKVKENNGVCLPQGLEYLPRKLRLLHWEYYPLSSLPQTFDPKNLVELNLPNSCAKK LWKGKKSLEKLKKLRLSHSYHLTKIPRLSSAPNLELLDLEGCNSLVSISQSICHLKKLVFLNLKDCSNLESVPSTVDLES LEVLNLSGCSKLENFPEISPNVKELYLGGTMIQEMPSSIKNLVLLEKLDLENSKYLKVLPTSICKLKHLETLNLSDCSRL ERFPDLNRKMKCFKCLDLSRTTIKELPSSISYLTALEELRLVECKSLVRLPDNAWSLRFKVEFRQIDTDKFSKLWNRFAW LKKVQIS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A) |