Names & Information
Knowledge of BnaA05G0299800GG:
| Gene Name | BnaA05G0299800GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At3g14460 [Brassica rapa] |
| Best Hit (SwissProt) | Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=3 SV=1 |
| NT seq | Len:4191 nt ATGGCGAGGTCCTATTCATCAAATAGCGCGAACGTAATGATTGAACGGATTAACAGTTCCCAAGAATTGGTCGAATTATG CAAAGGAAAGTCCTCCAGTGCATTGCTGAAGAGATTGAAGGTCGCTTTGGCCACCGTCCACCCGGTGATTGCGGACGCTG ATCAGAAAGCAGATCATGTCCGAGAAGTAAAACATTGGCTTACAGGACTCACAGATGCTTTCTTCCAGGCAGAGGATGTT CTTGATGAGTTACTAACAGAGGCTTTGAGAAGAAGAGTAGTAGCTGAAATGGGAGGATTCGGAGGACTATTCCAGAATCT TATGGGTGGTAACGAAGCCAACAAGAATAAGATAGAACGAAAGATGGAAAACGTAGTAAGACTGCTGGAACATCATGTGA GACACATAGAAATTATTGGATTAAAAGAATATAGCGAGACTCGGGAACCACAGTGGAGGCAAGCGTCACGGTCCAGACCT GATGATCTTCCACAAGGCAGAGTGGTTGGGCGAGCAGAAGATAAAGTAGCATTACTCAACTTGCTGCTTTCTGATGATGA AACAGGCATTAGGAGACCAGCTCTGGTTTCCACTGTGGGTATGCCTGGGGTTGGAAAGACAACCTTGACGCAGATAGTTT TCAAGGACGACAGTGTGACCAACCACTTTGATGTTAAAATGTGGGTTTCTGTTGGGCTAAACTTTAATGTCTTCACGGTT ACAAAAGCCTTTCTGCAGGAGATCACTTCAAGTGCAGTTAATACTGAGGATCTACCTTCACTTCAACTTCAGCTGAAGCA AGAACTATCAGGGAAGAGATTTTTACTCGTTATGGATGATATTTGGTCTGAAAGTGGCACAGAGTGGGAAAGCTTCAAGG TCGCCTTTACTGATGCAGAGGAAGGAAGCAAGATTGTTATAACCACACGAAGTGAAATTGTCTCCACAGCCGCACAGGCT GACAAAGTCTACCGAGTGAAGCTGATGACCAATGAAGAATGCTGGGAGCTGATCTCTAGATCTGCTTTTGGAAATATCTC AGTCGGTTCTATCAACCAAGAACTTGAAGGGATTGGCAAAAAGATTGCAGAGCAGTGTAAGGGCTTGCCTTTAACTGCAA GAGCCATCGCATCTCATCTCCGGTCAAAGCCAAATCCGGACGACTGGTATGATGTATCAAAGAATTTCTCGACTTACACC AACAGTATCCTTCCAGTTCTCAAACTGAGCTTTGACACTCTCCCTCCTGTACTCAAGCGATGTTTTTCTCTCTGCTCGAT ATTCCCCAAGGGTTATGTGTTCAATAGAGAGGAATTGGTGCTTCTATGGATGGCAATCGACCTCTTATACCAGCCAAGAA GCAACAAAAGATTAGAAGAGATTGGTTACGATCACATTGATGATTTAGTTGATCGATCTTTTTTCCTGAGGTTGGACATC ACCACGAAAAGCTTCGTGATGCATGATCTCATGAATGATTTGGCTAAAGCTGTTTCTGGAGATTTTTGCTTCAGAATGGA AGATGACAATATTGCGGAGGCACCAAGCATGGCTCGACATTTTTCTTTTTCCAGAAGCCATTGTGATGCTTCCATGGCTT TCAGGTCCGTCTCTGGAGCTAAGTTTCTTAGAAGCATTCTTCCGTTCAATGTTCCAACCGGTCTTGAATCTCTCCAACTC ACAGAGAAAATGTTGAATCCATTGCTTCAGGCATTGAGCAGCCTGAGAATTCTCAGCTTGTCTCATTATCAGATAACTCG CTTGCCTAAATCATTAAAGGGTTTGAAGCAGTTACGGTATCTAGATCTGTCAAGCACCAAAATAAAAGACCTCCCAGAGT TTGTGTGTACACTCTGTAATTTGCAGACACTGTTACTGTCAAATTGCCGTTACCTGACTAGCCTGCCAACAAGCATAGCC GAACTCATCAACTTGCGCCTCCTCGACCTTGTTGGCACTCCCTTGGTAGAGATGCCACTAGGAATAAGAAAGCTGAGAAG CTTGCAGAAGTTATCAAATTTTGTTGTTGGAAGGCTGAGCGGTGCCGGACTGCATGAGCTCAAAGAACTTTCTAATCTCC GAGGGACTCTTCGCATTTCTGAGCTACAAAATGTGGCCTTCGCCTCAGAAGCAAAAGACGCTGGTTTGAAAAGGAAGCAA TTCCTTGATGGGTTAATCCTGAAGTGGACTGTGAATGCTTCTAGCTTCGTGCCTGGTAGTCTTAGTGCATTGGCCTGTGA CCAGAAAGAGGTCTTGAAGATGCTAGAACCTAACACAAACTTGAAAACGTTCCGCATTGAGTCTTATCAGGGTTCAGAAT TTCCTAAATGGTTGGGTGATTCTTCATTCAGTGGAATTACAAACGTCACTCTCAGTAGCTGCAACCTCTGCATATCACTA CCTCCACTTGGGCAGCTGCCTTCACTCAAGTACCTCAGCATTGAGAAATTTAACATTCTGCTGAAGGTCGGTCTAGACTT CTTCGGTGAGAACACCTCTACCTTTGTACCGTTTCAGTCCTTGCTAACTCTGAAATTCTATGCCATGCCGAGATGGGAAG AATGGACTTGTCCAGAACTAGAAGGTGGGATCTTTCCTTGTCTCCAGAAACTCATGATAGAAAAATGCCCCCGCTTAAGG AAAACGTTTCCAGACGGACTCCCTCCTTCAACTGAAGTCGCCATCTCTGATTGCCCCCTAAGAGCAGTTGGTGGAGGAGA AGGTTCCTCCCCAGGGAATACGAGCATAACGGACCCACCACCTTCGAATCCAAGTTCTCAATCAGATATAGGTACAAGTA GTCAGAGTAATAATGACACTGAAGTAACTTCAACATCAAGCATGTCTTCTTTGCCAAAGAACCATCCACTATCAGAAGAG ATGGACCAGTATATAACTCAGCTTGAAAGCTCACATCAGCATATTGAAGAACCTGCTGTGATATCCGCAAGGTTCTCAGA ACTCATCTCCTCCGCTGATCTCAGCTCTATACTGTCACAATCACCACTTCGTCCAGATCTCAAAAATAGCGGCTTTGGAG ACCCTGGAAGTAGTAGCAACCAGAACCAGCAACAAGAACAGCTGCTTGTTCCAAGTGGACCATCTAGTGATAACGGTATA ACCAGGCCTTCGCAATCCATTGATGAAACAGACATTGAATACTTAAAAGTCACAGATATCTCCCACCTCATGGAGCTTCC CCAGAATCTACAGTCACTCCACATCGACACCTGCGACGGCCTAACTTCTTTACCGGAAAGCCTCTCCGAAAGCCACCCAA ATCTCCACGAGCTCCTCCTCGTCGCCTGTCACTCACTAGAATCCTTCCCTCCAACCACATTAAAAACACTCTACATAAGA GACTGCAAGAAACTCAACTTCCAAGAAAGCCTACAACCAACGCGCAGCTACTCACAGCTAGAGCACCTCTCCATCGAAAC CAGCTGCAGCAACAACCTCATCACCTTCCCTCTATCCCTCTTCCCAAAGCTCAAATCCCTCTCAATCACAGCCTGCGAAA GCTTCAGAACCTTCTCCATCCACGCCGGACTCGGAGACGACCGAATCGCACTCAAATCCCTAGAAATCAGAGATTGCCCA AACCTAACAACCTTCCCGCCCGGAGGCCTCCCAACGCCGAAGCTCTCTTCGATCCTCCTCTCAAACTGCGAGAACCTCCG AGCGTTACCGGAGAAGCTCTTCGGCCTCACGTCTCTCCAATCGCTCTTCGTAATCAAATGCCCAAAGCTCGATTCCATCC CCGGCGGAGGGTTCCCGAGCAATCTCCGAACGCTCTGCATCAACCTCTGCCCCAAGCTGACGCCGCGGATCGAATGGGGG TTGCGAGATCTAGAGAATCTTCGGAATCTCGAGATCGAAGGAGGTAACGAAGACATCGAATCGTTTCCGGACGAAGGATT GCTGCCGAGAGGGCTATTTTCTCTGAGGATAAGCCGATTCGAGAATCTCGCCGCGCTGAATCGGTTAGGGTTTCGAGATA CGAAGGGCTTGGAGACGATGGAGATCGACGGCTGTGATAAGCTGAGGATATTGGAGGAGGATCTCCCTCCTTCCTTGTCG TGTTTGCGGATAAGCTCTTGTTCGTTGTTGAGTGAGAAACTTGCTGAGGAAGGAACAGAGTGCGTCTTTAGTATTCCGCA TCTGGAAATAGACGGCGAGATCTTCTCTTGA |
| AA seq | Len:1397 aa MARSYSSNSANVMIERINSSQELVELCKGKSSSALLKRLKVALATVHPVIADADQKADHVREVKHWLTGLTDAFFQAEDV LDELLTEALRRRVVAEMGGFGGLFQNLMGGNEANKNKIERKMENVVRLLEHHVRHIEIIGLKEYSETREPQWRQASRSRP DDLPQGRVVGRAEDKVALLNLLLSDDETGIRRPALVSTVGMPGVGKTTLTQIVFKDDSVTNHFDVKMWVSVGLNFNVFTV TKAFLQEITSSAVNTEDLPSLQLQLKQELSGKRFLLVMDDIWSESGTEWESFKVAFTDAEEGSKIVITTRSEIVSTAAQA DKVYRVKLMTNEECWELISRSAFGNISVGSINQELEGIGKKIAEQCKGLPLTARAIASHLRSKPNPDDWYDVSKNFSTYT NSILPVLKLSFDTLPPVLKRCFSLCSIFPKGYVFNREELVLLWMAIDLLYQPRSNKRLEEIGYDHIDDLVDRSFFLRLDI TTKSFVMHDLMNDLAKAVSGDFCFRMEDDNIAEAPSMARHFSFSRSHCDASMAFRSVSGAKFLRSILPFNVPTGLESLQL TEKMLNPLLQALSSLRILSLSHYQITRLPKSLKGLKQLRYLDLSSTKIKDLPEFVCTLCNLQTLLLSNCRYLTSLPTSIA ELINLRLLDLVGTPLVEMPLGIRKLRSLQKLSNFVVGRLSGAGLHELKELSNLRGTLRISELQNVAFASEAKDAGLKRKQ FLDGLILKWTVNASSFVPGSLSALACDQKEVLKMLEPNTNLKTFRIESYQGSEFPKWLGDSSFSGITNVTLSSCNLCISL PPLGQLPSLKYLSIEKFNILLKVGLDFFGENTSTFVPFQSLLTLKFYAMPRWEEWTCPELEGGIFPCLQKLMIEKCPRLR KTFPDGLPPSTEVAISDCPLRAVGGGEGSSPGNTSITDPPPSNPSSQSDIGTSSQSNNDTEVTSTSSMSSLPKNHPLSEE MDQYITQLESSHQHIEEPAVISARFSELISSADLSSILSQSPLRPDLKNSGFGDPGSSSNQNQQQEQLLVPSGPSSDNGI TRPSQSIDETDIEYLKVTDISHLMELPQNLQSLHIDTCDGLTSLPESLSESHPNLHELLLVACHSLESFPPTTLKTLYIR DCKKLNFQESLQPTRSYSQLEHLSIETSCSNNLITFPLSLFPKLKSLSITACESFRTFSIHAGLGDDRIALKSLEIRDCP NLTTFPPGGLPTPKLSSILLSNCENLRALPEKLFGLTSLQSLFVIKCPKLDSIPGGGFPSNLRTLCINLCPKLTPRIEWG LRDLENLRNLEIEGGNEDIESFPDEGLLPRGLFSLRISRFENLAALNRLGFRDTKGLETMEIDGCDKLRILEEDLPPSLS CLRISSCSLLSEKLAEEGTECVFSIPHLEIDGEIFS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein (CC-NBS-LRR class) family protein; K19613 leucine-rich repeat protein SHOC2 (A) |