Names & Information
Knowledge of BnaA05G0309100QU:
| Gene Name | BnaA05G0309100QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance RPP13-like protein 1 isoform X2 [Brassica rapa] |
| Best Hit (SwissProt) | Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=3 SV=1 |
| NT seq | Len:3129 nt ATGACTGGAGGAGAGTTAATTCTCTCGGCTTTTCTACAAGCTCTCTTTCAGACGTTAATGTCTGGTCCTTTCAAGTCCTT CTTCAAGAGGCGAGAACTGAACGAGTGTGTACTAGAGAGGCTCAACACTGCGTTGTTGACAATAAGCGCGGTGCTGATTG ATGCGGAGGAGAAACAGATTACAAACCCAGCGGTGGAAAAATGGGTCAACGAACTGAGGGATGTTGTTTACCATGCTGAG GATGCTCTTGATGATATTGCTACAGAAGCTCTGCGTCTCAACATAGGAGCTGAATCGTCTTCCAATATGCTGAGACAGCT TCGTATCAGAACCCTGGGAGATCTTTTGGATGGGAGCAGTGATCATTTGGAGACCAGGCTCGCGAAGGTCACGATAAGGC TTGAGCGTTTAGCCTCACAAAGAAATGTTTTGGGTTTGAAAGAGATAACTGCAATGACACCCAAACAAAGGTTGCCAACG ACATCTCTTGTGGATGAATCTGAAGTGTTTGGTAGAGATGATGATAAAGATGAGATCATGAGACTCTTGATTCCTGAGAA CGGGGAGGATAGCGGGACAGCCGTTGTAGCTATTGTTGGAATTGGTGGGGTTGGCAAAACCACACTTTCACAACTCCTAT ACAACGATCAGCGTGTTCAGAGTCATTTTGGAACTAGGGTCTGGGCTCATGTCTCAGAGGAGTTTGACGTTTTCAAGATC ACCAAGAAGGTTTATGAATCTGTTACTTCCCGGCCTTGCGAGTTCACCGATCTGGATGTACTTCAAGTCAAATTGAAGGA GAGGTTAATAGGACCGTTTCTGCTTGTTCTAGATGATCTGTGGAATGAAAATTTTGCGGATTGGGATCTTCTACGCCAAC CCTTCACATCTGCTGCTCGAGGGAGCCGGATTATTGTGACAACAAGAAGCCAACGCGTTGCAACCATTATGTGTTCTGTC CATGTACACAACCTTAAGCCATTATCTGATGGAGATTGCTGGTCGTTGTTTATGAGAACCGTTTTTCCTAATCAAGATCC GTGCTTAGATCAAGAAATTGGAGATCTTGCGGAGAGGATAGTGTACAAGTGCCACGGCTTGCCCTTGGCTGCGAAAACAC TTGGTGGTGTTTTACGGTTTGAAGGTAACGTCGTAGAATGGGAGAGAGTTCTAAGCAGCAGGATTTGGGATCTTCCAGCT GATAAGAGCAATCTACTTCCAGTTTTACGGGTAAGCTACTATTACCTTCCAGCTCACTTGAAACGATGTTTTGCGTATTG TTCGATATTTCCCAAAGGGCATGCGTTTGAGAAGGAAAAGGTAGTTCTTCTGTGGATGGCAGAAGGTTTCTTGCAGCAGA CGAGAAGCAGTAAGAACCTAGAAGAGCTTGGGGATGAGTACTTTTCAGAACTAGAATCAAGGTCGCTTTTCCAAAAGACC AAGACGAGTTACATGATGCATGACTTTATCAATGAGCTTTCTCAATTTGCTTCAGGAGAGTTCAGCTCCAAGTTTGAAAA CGGTTGGAAACTTCATGTTTCAGAAAAGACTAGGTATCTATCCTACCTACGAGATAATTATGGTGAACCTATGAGGTTTG AAGCTCTTCGTGAGGTCAAGTTTCTCAGAACTTTTCTACCACTCAGCCTCACAAATTCTTCGCGGTCATGCTGCTTAGAT ACAATGGTCAGCGAGAAGCTACTTCCAACGCTTACCCGCTTGCGTGTTTTGTCTTTGTCACATTACAAGATCTCAAGGCT GCCTCCAGACTTTTTCAGGAACTTGAGCCATGCCCGGTTCTTGGATCTCTCTCGCACTGAACTCGAGAAGCTTCCGAAGT CCCTTTGTTATATGTATAACCTCCAGACACTTCTTTTGGCCTACTGTTCCAGTCTGAAGGACCTACCTACAGACATCTGC AACCTCATCAATCTGCGGTATCTTGATCTGATTGGGACGAAGCTAAAACGAATGCCGAAAAGATTTGGTAGATTGAAGAG CCTCCAGACTCTAACAACTTTTTTCGTGAGTGCTAGTGATGGGGCAAGGATTTGTGAACTTGGAGAACTCGATGAACTCC ATGGCAAACTCAGAATAGTCGAGCTACAGCGAGTTGTGGATGTTGCTGATGCTGCAGGAGCAAATTTAGACAGCAAGAAA CATCTAAAAGAGATTGATTTTATCTGGAGAACTGGATCTAGTAGCTCAGAGAGCAATACAAATCCTCACCGGACGCAGAA CGAAGCTGAAGTCTTTGAGAAGTTACGCCCACATCGTCGTATCGAGAAGCTCGCCATTGAGAGATACAACGGAAAAAAGT TTCCAGATTGGCTATGTGATTCCTCGTTCTCAAGAGTTGTGTGCATACGCCTCAGAGAATGTCGAAACCGTTCCTCGTTG CCATCTTTTGGTCAACTCCCAGGTCTCAAAGAGCTTTACATTTCAGGAATGGTCGGGCTCAGAAGCATAGGTTCCGAGTT CTACTTAAGTCCATCACTGCGCGATCGAGACCAACAGCCGTTTAAATCACTTGAAACGCTGCGGTTTGATAATCTGCCGG ATTTGGAAGACTGGTCAGACATAAGGGTCACCAAAGGAGACTTATTCCCTTCTCTCAAGAAACTTTCCATACTGAGATGT CCGGAGCTAACCGGGAATCTACCGACTTTTCTTCCTTCTCTGATATCTCTTCATATCCATAAATGTGGGGTCTTAGATTT CCAGCCAGACCACAACGAGTACAGCTACAGGAATCTTCAAAGGCTAAGCATAAAAAGCAGCTGTGACTCTCTCGTTACAT TTCCTTTAGGCCATTTCGCCAGCCTCCACGCGCTTGAGTTTGATAACTGCATATCTCTGCAGTCTTTGCAGCTCTCAAAG GAGCATTCGTATGGTCCGAACGCTCTAAGAAATCTGAGAATCAATGACTGTCAGAATCTGCAGCGTCTTCCAGAGCTGAA CTTACAGGTCACGGTCTCGGTCACAAACTGCAGGAATCTCAGACAGCCGATGGAACCACAGCCTCAATATCATCAGTTTC ATCTTCCAAGACTAAACGTTTCAGGCTCACAGAGGTCTCATGGTTCACACAGGTCATATGATTCACGTTCACCTTCAAGA TATGATTAA |
| AA seq | Len:1043 aa MTGGELILSAFLQALFQTLMSGPFKSFFKRRELNECVLERLNTALLTISAVLIDAEEKQITNPAVEKWVNELRDVVYHAE DALDDIATEALRLNIGAESSSNMLRQLRIRTLGDLLDGSSDHLETRLAKVTIRLERLASQRNVLGLKEITAMTPKQRLPT TSLVDESEVFGRDDDKDEIMRLLIPENGEDSGTAVVAIVGIGGVGKTTLSQLLYNDQRVQSHFGTRVWAHVSEEFDVFKI TKKVYESVTSRPCEFTDLDVLQVKLKERLIGPFLLVLDDLWNENFADWDLLRQPFTSAARGSRIIVTTRSQRVATIMCSV HVHNLKPLSDGDCWSLFMRTVFPNQDPCLDQEIGDLAERIVYKCHGLPLAAKTLGGVLRFEGNVVEWERVLSSRIWDLPA DKSNLLPVLRVSYYYLPAHLKRCFAYCSIFPKGHAFEKEKVVLLWMAEGFLQQTRSSKNLEELGDEYFSELESRSLFQKT KTSYMMHDFINELSQFASGEFSSKFENGWKLHVSEKTRYLSYLRDNYGEPMRFEALREVKFLRTFLPLSLTNSSRSCCLD TMVSEKLLPTLTRLRVLSLSHYKISRLPPDFFRNLSHARFLDLSRTELEKLPKSLCYMYNLQTLLLAYCSSLKDLPTDIC NLINLRYLDLIGTKLKRMPKRFGRLKSLQTLTTFFVSASDGARICELGELDELHGKLRIVELQRVVDVADAAGANLDSKK HLKEIDFIWRTGSSSSESNTNPHRTQNEAEVFEKLRPHRRIEKLAIERYNGKKFPDWLCDSSFSRVVCIRLRECRNRSSL PSFGQLPGLKELYISGMVGLRSIGSEFYLSPSLRDRDQQPFKSLETLRFDNLPDLEDWSDIRVTKGDLFPSLKKLSILRC PELTGNLPTFLPSLISLHIHKCGVLDFQPDHNEYSYRNLQRLSIKSSCDSLVTFPLGHFASLHALEFDNCISLQSLQLSK EHSYGPNALRNLRINDCQNLQRLPELNLQVTVSVTNCRNLRQPMEPQPQYHQFHLPRLNVSGSQRSHGSHRSYDSRSPSR YD* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Leucine rich repeat |
| KEGG | putative disease resistance RPP13-like protein 1; K19613 leucine-rich repeat protein SHOC2 (A) |