Names & Information
Knowledge of BnaA05G0309200QU:
| Gene Name | BnaA05G0309200QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At3g14460 [Brassica rapa] |
| Best Hit (SwissProt) | Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=3 SV=1 |
| NT seq | Len:4203 nt ATGGCGAAGTTCTATTCCTCAAATGGCGCGAACGTGATGATTGAACGGATTAACAATTCTCAAGAATTGGTCGAATTATG CAAAGGAAAGTCCTCCGGTGCATTGCTGAAGAGATTGAAGGTCGCTTTGGCCACTGTCCACCCGGTGATTGCGGACGCTG ATCAGAAAGCAGATCATGTCCGAGAAGTAAAACATTGGCTTATAGGACTCACAGATGCTTTCTTCCAGGCAGAGGATGTT CTTGATGAGTTACTAACAGAGGCTTTGAGAAGAAGAGTAGTAGCTGAAGTGGGAGGATTCGGGGGACTATTCCAGAATCT TATGGGTGGTAACGAAGCCAACAAGAATAAGATAGAACGAAAGATGGAAAACGTAGTAAGACTGCTGGAACATCATGTGA GACACATAGAAATTATTGGATTAAAAGAATATAGCGAGACTCGGGAACCACAGTGGAGGCAAGCGTCACGGTCCAGACCT GATGATCTTCCACAAGGCAGAGTGGTTGGGCGAGCAGAAGATAAAGTAGCATTACTCAACTTGCTGCTTTCTGATGATGA AACAGGCATTAGGAGACCAGCTCTGGTTTCCACTGTAGGTATGCCTGGGGTTGGAAAGACAACCTTGACGCAGATAGTTT TCAAGGACGACAGTGTGACCAACCACTTTGATGTTAAAATGTGGGTTTCTGTTGGGCTAAACTTTAATGTCTTCACGGTT ACAAAAGCCGTTCTGCAGGAGATCACTTCAAGTGCAGTTAATACTGAGGATCTACCTTCACTTCAACTTCAGCTGAAGCA AGAACTATCAGGGAAGAGATTTTTACTCGTTCTGGATGATATTTGGTCTGAAAGTAGCACAGAGTGGGAAAGCTTCAAGG TCGCCTTTACTGATGTAGAGGAAGGAAGTAAGATTGTTATAACAACACGAAATGACATTGTCTCCACAGCCGCACAGGCT GACAAAGTCTACCGAGTGAAGCTGATGACCAATGAAGAATGCTGGGAGCTGATCTCTAGATCTGCTTTTGGAAATATCTC AGTCGGTTCTATCAACCAAGAACTTGACGGGATTGGCAAAAGGATTGCAGAACAATGTAAGGGCTTACCGTTAACTGCAA GAGCCATCGCATCTCATCTCCGGTCAAAGCCAAATCCTGACGACTGGTATGATGTATCAAAGAATTTCTCGACATACACT AACAGCATCCTTCCAGTTCTTAAACTGAGCTTTGACACTCTCCCTCCTGTACTCAAGCGATGTTTTTCACTCTGCTCGAT ATTCCCCAAGGGTTATGTGTTCAAAAGAGAGGAGTTGGTGCTTCTATGGATGGCAATAGACCTCTTATACCAGCCAAGGA GTAACAAAAGATTAGAAGAGATTGGTTACGATTACATTGATGATTTAGTTGGTCGATCTTTCTTCCTGAGGTTGGACATC ACCATGAAAAGCTTCGTGATGCATGATCTCATGAATGATTTGGCTAAAGCTACTTCAGGAGATTTTTGCTTCAGACGGGA AGATGACAATATTGCGGAGGTGCCAAGCAAGGTTCGACATTTTTCCTTTTCCAGAAGCCAGTGTGATGCTTCCATGGCTT TCAAGTCCATCTCTGGAGTTGAGTTTCTTAGAACCATTCTTCCCTTCAATGTTCCAACCGGTCTTGAATCTCTCCAACTC ACAGAGAAAATTTTGAATCCATTGCTTCAGGCATTGAGCAGCCTGAGAATTCTCAGCTTGTCTCATTATCAGATAACTCG CTTGCCTAAATCATTAAAGGGTTTGAAGCAGTTACGGTATCTAGATCTGTCAAGCACCAAAATAAAAGACCTCCCAGAGT TTGTGTGTACACTCTGTAATTTGCAGACACTGTTACTATCAAACTGCCGTTACCTGACTAGCCTGCCAACAAACATAGCC GAACTCATCAACTTGCGCCTCCTCGACCTTGTTGGCACTCCCTTGGTAGAGATGCCACTAGGAATAAGAAAGCTGAGAAG CTTGCAGAAGTTATCTAATTTTGTTGTAGGAAGGCTGAGCGGAGCCGGACTGCACGAGCTCAAAGAACTTTCTGATCTCC GGGGGACTCTTCGCATCTCTGAGCTGCAAAATGTGGCCTTCTCCTCAGAAGCAAAAGACGCTGGTTTGAAAAGGAAGCAA TTGCTTGATGGGTTAATCCTGAGGTGGACTGTGAAAGCTTCTAGCTTCGCCCCTGGTAGTCTTAGTACATTGTCTTGTGA CCAGAAAGAGGTCCTCAAGATGCTAGAACCTAACCAAAACTTGAAAACGTTCTGCATTGAGTCTTATCAGGGTTCAGAAT TTCCTAAATGGTTGGGTGATTCTTCATTCAATAGTATTGCATCTGTCACTCTCAGTAGCTGCAACCTCTGCATATCACTA CCTCCACTTGGGCAACTGCCTTCACTCAAGTACCTCAGCATTGAGAAATTTAACATTCTGCTGAAGGTCGGTCAAGACTT CTTCGGTGAGAACACCTCTACCTTTGTACCGTTTCAGTCCTTGCAAACTCTGAAATTCTATGCCATGCCGAGATGGGAAG AATGGACTTGTCCAGAACGAGAAGATGGGATCTTTCCTTGTCTCCAGAAACTCATGATAGAAAAATGCCCCCGCTTAAGG AAAACGTTTCCAGAAGGACTCCCTCCTTCAACTGAAGTCGCCATCTCTGATTGCCCCCTAAGAGCAGTTGGTGGAGGAGA AGGTTCCTCCCCAGGGAATACGAGCATAACGGACCCACCACCTTCCCCTGCAGAGAATCCACCGGCGAATCCAAGTTCTC AATCAGATATAGGTACAAGTAGTCAGAGTAATAATGACACTGAAGTAACTTCAACATCAAGCATGTCTTCTTTGCCAAAG AACCAAGAGGTGGAGCAATATATAACTCAACTTGAAATCCCACATCAGCATAATGAAGAAGAACCTGCTGTGATATCGGC AAGGTTCTCAGAATTCATCTCCACTGATCCCGGCTCCCTAAGTCCATATCAGTCAGGATCATTATTTCTTCCAGATCTCA GAGGTTTTGGAGACCCTGGAAGTAGTAGCAACCAGAACCAGCAACAAGGGAAGGCGGTTACTCCAAGTGGACAGTCTAGT GACAACGGTCTAACCGGACCTCCGCAATCCAATGATGACACAGATATGGAATACTTAAAAGTCACAGATATCTCTCACCT CCTGGAGCTTCCCCAGAACCTGCAGTCCCTCCACATCGACACCTGCGACGGCCTAACTTCTTTACCAGAAAGCCTCTCCG AAAGCCACCCAAATCTCCACGAACTCCTCCTCGTCGCCTGTCACTCACTAGAATCCTTCCCTCCAACCACATTAAAAACA CTCTACATAAGAGACTGCAAGAAACTCAACTTCCAAGAAAGCCTACAACCAACACGCAGCTACTCACAGCTAGAGTACCT CTCCATCGAAACCAGCTGCAGCAACAACCTCATCACCTTCCCTCTATCCCTCTTCCCAAAGCTCAAATCTCTTTCAATCA CAGCCTGCGAAAGCTTCAGAACCTTCTCCATCCACGCCGGACTCGGAGACGACCGAATCGCACTCAAATCCCTAGAAATC AGAGATTGCCCAAACCTAACAACCTTCCCACACGGAGGCCTCCCGACGCCGAAGCTCTCTTCGATCCTCCTCTCAAACTG CGAGAACCTCCGAGCGTTACCGGAGAAGCTCTTCGGCCTCACGTCTCTCCAATCGCTCTTCGTAATCAAATGCCCAAAGC TCGATTCCATCCCCGGCGGAGGGTTCCCGAGCAATCTCCGAACGCTCTGCATCAACCTCTGCCCCAAGCTGACGCCGCGG ATCGAATGGGGGTTGCGAGATCTGGAGAATCTTCGGAATCTCGAGATCGAAGGAGGTAACGAAGACATCGAATCGTTTCC GGACGAAGGATTGCTGCCGAGAGGGCTATTTTCTCTGAGGATAAGCCGATTCGAGAATCTCGCCGCGCTGAATCGGTTAG GGTTTCGAGATACGAAGGGCTTGGAGACGATGGAGATCAACGGCTGTGATAAGCTGAGGATATTGGAGGAGGATCTTCCT GCTTCCTTGTCGTGTTTGCGGATAAGCTCTTGTTCGTTGTTGAGCGAGAAAATTGCTGAGGAAGGAAGAGAGTGCGTCTT TAGTATTCCGTATGTGGAAATAGACGGCGAGGTCTTCTCTTGA |
| AA seq | Len:1401 aa MAKFYSSNGANVMIERINNSQELVELCKGKSSGALLKRLKVALATVHPVIADADQKADHVREVKHWLIGLTDAFFQAEDV LDELLTEALRRRVVAEVGGFGGLFQNLMGGNEANKNKIERKMENVVRLLEHHVRHIEIIGLKEYSETREPQWRQASRSRP DDLPQGRVVGRAEDKVALLNLLLSDDETGIRRPALVSTVGMPGVGKTTLTQIVFKDDSVTNHFDVKMWVSVGLNFNVFTV TKAVLQEITSSAVNTEDLPSLQLQLKQELSGKRFLLVLDDIWSESSTEWESFKVAFTDVEEGSKIVITTRNDIVSTAAQA DKVYRVKLMTNEECWELISRSAFGNISVGSINQELDGIGKRIAEQCKGLPLTARAIASHLRSKPNPDDWYDVSKNFSTYT NSILPVLKLSFDTLPPVLKRCFSLCSIFPKGYVFKREELVLLWMAIDLLYQPRSNKRLEEIGYDYIDDLVGRSFFLRLDI TMKSFVMHDLMNDLAKATSGDFCFRREDDNIAEVPSKVRHFSFSRSQCDASMAFKSISGVEFLRTILPFNVPTGLESLQL TEKILNPLLQALSSLRILSLSHYQITRLPKSLKGLKQLRYLDLSSTKIKDLPEFVCTLCNLQTLLLSNCRYLTSLPTNIA ELINLRLLDLVGTPLVEMPLGIRKLRSLQKLSNFVVGRLSGAGLHELKELSDLRGTLRISELQNVAFSSEAKDAGLKRKQ LLDGLILRWTVKASSFAPGSLSTLSCDQKEVLKMLEPNQNLKTFCIESYQGSEFPKWLGDSSFNSIASVTLSSCNLCISL PPLGQLPSLKYLSIEKFNILLKVGQDFFGENTSTFVPFQSLQTLKFYAMPRWEEWTCPEREDGIFPCLQKLMIEKCPRLR KTFPEGLPPSTEVAISDCPLRAVGGGEGSSPGNTSITDPPPSPAENPPANPSSQSDIGTSSQSNNDTEVTSTSSMSSLPK NQEVEQYITQLEIPHQHNEEEPAVISARFSEFISTDPGSLSPYQSGSLFLPDLRGFGDPGSSSNQNQQQGKAVTPSGQSS DNGLTGPPQSNDDTDMEYLKVTDISHLLELPQNLQSLHIDTCDGLTSLPESLSESHPNLHELLLVACHSLESFPPTTLKT LYIRDCKKLNFQESLQPTRSYSQLEYLSIETSCSNNLITFPLSLFPKLKSLSITACESFRTFSIHAGLGDDRIALKSLEI RDCPNLTTFPHGGLPTPKLSSILLSNCENLRALPEKLFGLTSLQSLFVIKCPKLDSIPGGGFPSNLRTLCINLCPKLTPR IEWGLRDLENLRNLEIEGGNEDIESFPDEGLLPRGLFSLRISRFENLAALNRLGFRDTKGLETMEINGCDKLRILEEDLP ASLSCLRISSCSLLSEKIAEEGRECVFSIPYVEIDGEVFS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein (CC-NBS-LRR class) family protein; K19613 leucine-rich repeat protein SHOC2 (A) |