Names & Information
Knowledge of BnaA05G0374500GG:
| Gene Name | BnaA05G0374500GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:3675 nt ATGCCGTCGTCAATATCGGAATTCTCCAAATCGTGGCCGCGGAAAGGATCCCTGCGAACCACAGTGGTGACTGATTCATG TTTTATGGATGAGAAACAATACGAAACTCCACCGGATTGCTGTTTACAACGTATAACGAGATTGGTTTTTCTGAAATACA TTTTCAGATCTGCTCGTCTGATGACTCTCTCTCGCAATTGTAAACACCATGTCTTTCCTAGCTTCCACGGGCCAGATGTT CGTAGAGGCTTTCTCACCTACTTACTGAAGGAGTTCAGAGAGAAAGCAATCGACGTCTTCATAGACAATGATATAGAGAG GAGCAAGTTGATTGGTCCCGAGCTCACAGAAGCTATAAGAGGATCGTTAATTGCAGTTGTCTTGATCTCGCGGAACTACG CTTCATCAACATGGTGTCTGAACGAGTTGGTGCAGATCATGAAGTGTTGGGAAGAAGATAAGCAGACGGTGGAGGTGATT TTCTATGAAGTGGATCCATCTGACGTGAAAAAGCAGAAGGGCGACTTCGGAGCTGTCTTTGATAGAACTTGTGCAGAGAA ATCAACGGAGGAAGTTGAGAGATGGAGAAAAGCTTTGCATATTGTGGCTCAAATCGCTGGTTACCATACAAGCAACTATG ATGATGATGCAGTCATGATTGCAAAAATTGTTACCGATGTTTCGAACAAGTTCATTGATTCTACAACATCAAATGATTCC GACAGCTTAGTTGGGATTGAAACTCATATACGGGAGATACAGACATTGTTGTCCTTAGAATCCGATGAAGTCCGGATGGT TGGTATCTGGGGTCCTGCTGGAATTGGTAAGACGACCATCGCCAGAGCTTTATACGGAGAGCTCTCTAGTAAGTTTACAC ATGCTGCTTTTATTGAGAGTATCCAAGGGAAGTTTGAGCAAAATTATCGTGACGAGCACGCCTTCATGTTGCATTTACAA GAAAAACTTTTGTCTGAGACCTTAAATCAGAAAGATTTTAAAATAGGTCATTTGGGTGTGGCAAAAGCAAGACTGAAGGA CAAGAAAGTGCTTGTCGTTCTTGATGATGTGGATGACTTAAAGCAGCTAGAAGCCATGACTGACCAAACTTGCTGGTTTG GGCCTCAAAGTAGGATTATCATCACAACAAAGGATAAAAAGCTTTTTGTAGCACATGAGATCAACCATATTTACCAAGTG GATTTTCCATCTACATCTGAAGCTCTTGAAATTCTCTGTCTGTCTGCTTTTCGTCAACATTCACCTTCATCAGGGTTTGA GGACATGGCCATAGAAGTTACACGGCTCGCCGGTCGTCTTCCTTTGGGTCTATGTGTTTTTGGCGCTTATCTGCGAGGAA TGTCCAGGGATCGGTGGATACATGCATTACCTAGACTTAGGACGAGTCTTGATGGGAAGATTGAGAAAGTGTTAAGTTTC AGCTATGATGCTTTATGCAAGGAAGATCAAGAATTGTTTCTTCATATAGCATGTTTTCTCAAAGGTGAATGGATTACTGA CGTGGTGGAGTGTCTTGCGGAGAGTCGTTTGAACGTCAACCACGGGCTCCAAGTGTTGTTGGATAAATGTTTCATATCTA TACGCAAATGGGGACGGTTGGCGGTGCATAATTTGCTTGAGCAATTGGCTAAAGATATTGTCCGTAAACAGTCTGATAAT CCTGGGAAACGTCAGTTCTTGGTGGATGCTCAGGACATTTGTGATGTGCTCGAGGAAAATGCTGGCACTGAAACCATTAG AGGAATAGATTTTGACTTATCGGAGGTCAGGGGAGACTTAGTTATTGACGAGCGAGCCTTTGAAGGGATGTCTAGGCTCC AGTTCTTAAGATTTCAGAAACGGGGTTTGTATAACAACACCAAACTTCTCCTACCCCAGGATCTGAAGTTTAGAGCTAGT AAACTTAGATTTCTTGAATGGGATCAGTTTCCGCTGGCATGTTTTCCTCGTGAGTTTCAACCGCGGCGTCTTGTCAAACT TATGATGGAGCACAGCAAGCTTGAAAAGCTGTGGGAAGGACCTATTCCTCTCCCTTGTCTGAAGTTGATAGAGCTGTCTA GTTCCGACTACCTCAAAGAACTTCCGGATCTGTCCAATGCCACTAGTCTCAAGGTACTGAGGGCTGGTTTTTGCTCAAGT CTGTCGGAGATCTCCTCTATTGGGAAGTCCACTAGTCTCGAGGAGTTACATCTCGCTGGTTGCTTTGAGTTGATTGTGAT CCCCTCGTCCATTGGGAATGCTATTAATCTCAAGACGTTGAATGTCCAGGTGTGCCAGGGTCTGGTTGAACTCCCCTCCT CTATTTGGAGCCTTAAGAAGTTAAAGAAACTGTTAATTGCAGGATGCCCAAACCTTAACCATTTGGGGTCACAGTTGAGA AGCTTTCCTGATATTTCCGGAAACATTACAGAATTAGATATGAGTAATACAGCGATAGAAGAGTTTCCTTCGTCAATCAT GGCTTTTTCGTGTCTTCGTAAACTCACAACAATGACTGCTGAAAGTCTCAGGGTGTTTCCAGATGTTCCTGACACCATCG AAGTGTTAAAATTGCACAATGCGGGAATAGAAGAAATTCCTCCGACGATTAAGAATCTCTCACGTCTCACTACACTAAGC ATGCCTCGCTGCAAGAAGCTAAAGGTCCTTCCAACCAACGTCAACCTGCAATCGCTCTCTTCACTTGATCTCAGTTCCTG CACACAATTGAGAACTTTTCCAGAGATATCTGTAGGCATTAGATCTCTTAATCTGAGCAATACTGGTATAGAAGAAGTCC CTTCATCCATATGGTCTTGGTCCAGTCTTCTTAAATTGAACTTGGAAGATTGCCACAGCCTTCGGGTGTTCCATTGCGTT CCTGACAACATCGAAGAGTTGGACTTGAGAAATACGGGAACAGATTTCTCAGGTGGGGATTTACGTATAAACCTCAAAGG GTGCAAGAATCTTGTGTCACTGCCCCACATTCCGTATCGCGTCTCATACCTTGATGCATCTAACTGTGAGTCGCTGAAGA GAATAGATGGCTTAGTTAGCAATCCAGAGAGATGTCTCAGTTTTGCTAACTGTTTCAAGCTGAGTGAAGCAGCGAGAGAA CTCATCGAGGAATCGGATTACAAGTTTGCGCTCTTACCTGGTGGAGAACTGCCTGCAGAATTTGATCACCGAGCAAGAGA GGGTTTACTAACTGTCAATTTGGATCAGAGCCCTCTACCTTTATTCTTACGATTTAAAGCTTGCCTTTTGCTGCTTCATG GACACTATATAGAGGACGAGGATGCCAGTGAGGATGATAAGGACGATGAATGGATGGGTGCCAAGAGGCTTTTCTGTGAC ATCTGGTACGTTCAGAATGGCCTCTATGTTGGACATGGATCCTGCAAGTACCAGCTACCAGCAGTACTTGGATTTAAGGA GCATGTGTATTTCTTGGAATCTTCCATTTCACTAAACCTTCCTGAAACAGATGAGAATGTCAGCCAGCTTCATTTTGAGT TCAAGATCACTGGTAAATACTGGGATGTAAAAGACTTTGGTCTACAGCTCTTCGAAGACCCTGATGTTCGTGATGACCAT GTATGCTGTGGTGATACTTACAAAGAAACTGCGGACATCAATATTAGAGAAAACTTACATGCAGGAACAATGTGA |
| AA seq | Len:1225 aa MPSSISEFSKSWPRKGSLRTTVVTDSCFMDEKQYETPPDCCLQRITRLVFLKYIFRSARLMTLSRNCKHHVFPSFHGPDV RRGFLTYLLKEFREKAIDVFIDNDIERSKLIGPELTEAIRGSLIAVVLISRNYASSTWCLNELVQIMKCWEEDKQTVEVI FYEVDPSDVKKQKGDFGAVFDRTCAEKSTEEVERWRKALHIVAQIAGYHTSNYDDDAVMIAKIVTDVSNKFIDSTTSNDS DSLVGIETHIREIQTLLSLESDEVRMVGIWGPAGIGKTTIARALYGELSSKFTHAAFIESIQGKFEQNYRDEHAFMLHLQ EKLLSETLNQKDFKIGHLGVAKARLKDKKVLVVLDDVDDLKQLEAMTDQTCWFGPQSRIIITTKDKKLFVAHEINHIYQV DFPSTSEALEILCLSAFRQHSPSSGFEDMAIEVTRLAGRLPLGLCVFGAYLRGMSRDRWIHALPRLRTSLDGKIEKVLSF SYDALCKEDQELFLHIACFLKGEWITDVVECLAESRLNVNHGLQVLLDKCFISIRKWGRLAVHNLLEQLAKDIVRKQSDN PGKRQFLVDAQDICDVLEENAGTETIRGIDFDLSEVRGDLVIDERAFEGMSRLQFLRFQKRGLYNNTKLLLPQDLKFRAS KLRFLEWDQFPLACFPREFQPRRLVKLMMEHSKLEKLWEGPIPLPCLKLIELSSSDYLKELPDLSNATSLKVLRAGFCSS LSEISSIGKSTSLEELHLAGCFELIVIPSSIGNAINLKTLNVQVCQGLVELPSSIWSLKKLKKLLIAGCPNLNHLGSQLR SFPDISGNITELDMSNTAIEEFPSSIMAFSCLRKLTTMTAESLRVFPDVPDTIEVLKLHNAGIEEIPPTIKNLSRLTTLS MPRCKKLKVLPTNVNLQSLSSLDLSSCTQLRTFPEISVGIRSLNLSNTGIEEVPSSIWSWSSLLKLNLEDCHSLRVFHCV PDNIEELDLRNTGTDFSGGDLRINLKGCKNLVSLPHIPYRVSYLDASNCESLKRIDGLVSNPERCLSFANCFKLSEAARE LIEESDYKFALLPGGELPAEFDHRAREGLLTVNLDQSPLPLFLRFKACLLLLHGHYIEDEDASEDDKDDEWMGAKRLFCD IWYVQNGLYVGHGSCKYQLPAVLGFKEHVYFLESSISLNLPETDENVSQLHFEFKITGKYWDVKDFGLQLFEDPDVRDDH VCCGDTYKETADINIRENLHAGTM* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |