Names & Information
Knowledge of BnaA05G0406600ZS:
| Gene Name | BnaA05G0406600ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance RPP13-like protein 1 isoform X1 [Brassica rapa] |
| Best Hit (SwissProt) | Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=3 SV=1 |
| NT seq | Len:3129 nt ATGATTGTAGGAGAGATGGTTCTCTCGGCTTTTTTACAAGCTCTCTTCCAGACACTGATGTCCGGTCCTTTCAAGTCCTT CTTCAAGAGGCGAGAACTGAACGAGTGTGTACTAGAGAGGCTCAACATTGCTTTGTTGACAATAAGTGCGGTGCTGATTG ATGCGGAGGAGAAACAGATTACAAACCCGTCGGTGGAAAAATGGGTCAACGAGCTGAGAGATGTTGTTTACCATGCTGAG GATGCTCTTGATGATATTGCTACAGAAGCTCTGCGTCTCAACATAGGAGCTGAATCTTCTTCCAATAGGCTGAGACAGCT TCGTGTCAGAACCCTGGCAGATTTTTTGGAAGGGAACAGTGATCATTTGGAGACCAGGCTCGAGAAGGTCACGATGAGGC TCGAGCGTTTAGCCTCGCAAAGAAATATCTTGGGTTTGAAAGAGATAACTGCAATGACACCCAAACAAAGGTTGCCAACT ACATCTCTTGTGGATGAATCTGAAGTGGTTGGTAGAGATGATGATAAAGATGAGATCATGAGATTCTTGATTCCTGAGAA CGGGGAGGATAGTGGGACAACCGTGGTAGCTATTGTTGGAATTGGTGGGGTTGGCAAAACTACACTTTCACAACTCCTAT ACAATGATCATCGTGTTCAGAATCATTTTGGAACTAGGGTCTGGGCTCATGTCTCAGAGGAGTTTGACGTTTTCACGATC ACCAAGAAGGTTTATGAATCCGTTACTTCCCGGCCTTGCGAGTTCACGGATCTGGATGTACTTCAAGTCAAATTGAAGGA GAGGTTAATAGGACCGTTTCTGCTTGTTCTAGATGATCTGTGGAATGAAAATTTTGCGGATTGGGATCTTCTACGCCAAC CCTTCACATCTGCTGCTCGAGGGAGCCGGATTATTGTGACAACACGAAGCCAACGCGTTGCAACCATTATGTGTTCTGTC CATGTACACAACCTTAAGCCATTATCTGATGGAGATTGTTGGTCGTTGTTTATGAGAACCGTTTTTCCTAATCAAGATCC GTGCTTAGATCAAGAAATTGGAGATCTTGCGGAGAGGATAGTGTACAAGTGCCACGGCTTGCCCTTGGCTGCGAAAACAC TTGGTGGTGTTTTACGGTTTGAAGGTAACGTCGTAGAATGGGAGAGAGTTCTAAGCAGCAGGATTTGGGATCTTCCAGCT GATAAGAGCAATCTACTTCCAGTTTTACGGGTAAGCTACTATTACCTTCCAGCTCACTTGAAACGATGTTTTGCCTATTG TTCGATATTTCCCAAAGGGCATGCGTTTGAGAAGGAAAAGGTAGTTCTTCTGTGGATGGCAGAAGGTTTCTTGCAGCAGA CGAGAAGCAGTAAGAACCTAGAAGAGCTTGGGGATGAGTACTTTTCAGAACTAGAATCAAGGTCGCTTTTCCAAAAGACC AAGACGAGTTACATGATGCATGACTTTATCAATGAGCTTTCTCAATTTGCTTCAGGAGAGTTCAGCTCCAAGTTTGAAAA CGGTTGCAAACTTCATGTTTCAGAAAAGACTAGGTATCTATCCTACCTACGAGATAATTATGGTGAACCTATGAGGTTTG AAGCTCTTCGTGAGGTCAAGTTTCTCAGAACTTTTCTACCACTCAGCCTCACAAATTCTTCGCGGTCATGCTGCTTAGAT ACAATGGTCAGCGAGAAGCTACTTCCAACGCTTACCCGCTTGCGTGTTTTGTCTTTGTCACATTACAAGATCTCAAGGCT GCCTCCAGACTTTTTCAGGAACTTGAGCCATGCCCGGTTCTTGGATCTCTCTCGCACTGAACTCGAGAAGCTTCCGAAGT CCCTTTGTTATATGTATAACCTCCAGACACTTCTTTTGGCCTACTGTTCCAGTCTGAAGGACCTACCTACAGACATCTGC AACCTCATCAATCTGCGGTATCTTGATCTGATTGGGACGAAGCTAAAACGAATGCCGAAAAGATTTGGTAGATTGAAGAG CCTCCAGACTCTAACAACTTTTTTCGTGAGTGCTAGTGATGGGGCAAGGATTTGTGAACTTGGAGAACTCGATGAACTCC ATGGAAAACTCAGAATAGTCGAGCTACAACGAGTTGTGGATGCTGCTGATGCTGCAGGAGCAAATTTAGACAGCAAGAAA CATCTGAAGGAGATAGATTTTGTCTGGAGAACTGGATCTAGTAGCTCAGAGAACTACACAAATCCTCACCGGACGCAGAA TGAAGCTGAGGTCTTTGAGAAGTTACGCCCACATCGTCGTATCGAGAAGCTCGCCATTGAGAGATACAACGGAAAAAAGT TTCCAGATTGGCTTTGTGATTCCTCGTTCTCAAGAGTTGTGTGCATACGCCTCAGAGAATGTCGAAACCGTTCCTCGTTG CCATCTTTTGGTCAACTCCCAGGTCTCAAAGAGCTTTACATTTCAGGAATGGTCGGACTCAGAAGCATAGGTTCCGAGTT CTACTTAAGTCCATCACTGCGCGATCGAGACCAACAGCCGTTTAAGTCACTTGAAACGCTGCGGTTTGATAACCTGCCGG ATTTGGAAGACTGGTCAGACATAAGGGTCACCAAAGGAGACTTATTCCCTTCTCTAAAGAGACTTTCCATACTAAGATGT CCGGAGCTAACCGGGAATCTACCGACTTTTCTTCCTTCTCTGATATCTCTTCATATCCATAAATGTGGGGTCTTAGATTT CCAGCCAGACCACCACGAGTACAGCTACAGGAATCTTCAAAGGCTAAGCATAAAAAGCAGCTGTGACTCTCTCGTTACAT TTCCTTTAGGCCATTTCGCCAACCTCCACACGCTTGAGTTTGATAACTGCATATCTCTGCAGTCTTTGCAGCTATCGAAG GAGCATTCGTATGGTCCGAACGCTCTAAGAAACCTGAGAATCAATGACTGTCAGAATCTGCAGCGTCTTCCAGAGCTGAA CTTACAGGTCACGGTCTCGGTCACGAACTGCAGGAATCTCAGACAGCCGATGGAACCACAGCCTCAATATCATCAGTTTC ATCTTCCAAGACTAAACGTTTCAGGTTCACAAAGGTCTCATGGTTCACACAGGTCATATGATTCACGTTCACCTTCAAGA TATGATTAA |
| AA seq | Len:1043 aa MIVGEMVLSAFLQALFQTLMSGPFKSFFKRRELNECVLERLNIALLTISAVLIDAEEKQITNPSVEKWVNELRDVVYHAE DALDDIATEALRLNIGAESSSNRLRQLRVRTLADFLEGNSDHLETRLEKVTMRLERLASQRNILGLKEITAMTPKQRLPT TSLVDESEVVGRDDDKDEIMRFLIPENGEDSGTTVVAIVGIGGVGKTTLSQLLYNDHRVQNHFGTRVWAHVSEEFDVFTI TKKVYESVTSRPCEFTDLDVLQVKLKERLIGPFLLVLDDLWNENFADWDLLRQPFTSAARGSRIIVTTRSQRVATIMCSV HVHNLKPLSDGDCWSLFMRTVFPNQDPCLDQEIGDLAERIVYKCHGLPLAAKTLGGVLRFEGNVVEWERVLSSRIWDLPA DKSNLLPVLRVSYYYLPAHLKRCFAYCSIFPKGHAFEKEKVVLLWMAEGFLQQTRSSKNLEELGDEYFSELESRSLFQKT KTSYMMHDFINELSQFASGEFSSKFENGCKLHVSEKTRYLSYLRDNYGEPMRFEALREVKFLRTFLPLSLTNSSRSCCLD TMVSEKLLPTLTRLRVLSLSHYKISRLPPDFFRNLSHARFLDLSRTELEKLPKSLCYMYNLQTLLLAYCSSLKDLPTDIC NLINLRYLDLIGTKLKRMPKRFGRLKSLQTLTTFFVSASDGARICELGELDELHGKLRIVELQRVVDAADAAGANLDSKK HLKEIDFVWRTGSSSSENYTNPHRTQNEAEVFEKLRPHRRIEKLAIERYNGKKFPDWLCDSSFSRVVCIRLRECRNRSSL PSFGQLPGLKELYISGMVGLRSIGSEFYLSPSLRDRDQQPFKSLETLRFDNLPDLEDWSDIRVTKGDLFPSLKRLSILRC PELTGNLPTFLPSLISLHIHKCGVLDFQPDHHEYSYRNLQRLSIKSSCDSLVTFPLGHFANLHTLEFDNCISLQSLQLSK EHSYGPNALRNLRINDCQNLQRLPELNLQVTVSVTNCRNLRQPMEPQPQYHQFHLPRLNVSGSQRSHGSHRSYDSRSPSR YD* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Leucine rich repeat |
| KEGG | putative disease resistance RPP13-like protein 1; K19613 leucine-rich repeat protein SHOC2 (A) |