Names & Information
Knowledge of BnaA05G0483300ZS:
| Gene Name | BnaA05G0483300ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:3774 nt ATGCCCAAAATTAAATCTAAATTCAAAATCTCCGAAAACACCTCCTTCTCTCGTCGTCACCATCTCCGCCGTCGATCCGC TGCCGTCATGCCGTCGTCAATATCGGAATTCTCCAAATCGTGGCCGCGGAAAGGATCCCTGCGAACCACATTGGTGACTG ATTCATGTTTTATGGATGAGAAACAATCACATCATCAGTATGAAACTCCACCAGGTTGCTGTTTACAACGTGTAACGAGA TTGGTTTTTCTGAAATACATTTTCAGATCTGCTCGTCTGATGACTCTCTCTCGCAATTGTAAACACCATGTCTTTCCTAG CTTCCACGGGCCAGATGTCCGTAGAGGCTTTCTCAGCTACTTACTGAAGGAGTTAAGAGAGAAAGCAATCGACGTCTTCA TAGACAATGATATAGAGAGGAGCAAGTTGATTGGTCCCGAGCTCACAGAAGCTATAAGAGGATCGTTAATTGCAGTTGTC TTGATCTCGCGGAACTACGCTTCATCAACATGGTGTCTGAACGAGTTGGTGCAGATCATGAAGTGTTGGGAAGAAGATAA GCAGACGGTGGAGGTGATTTTCTATGAAGTGGATCCATCTGACGTGAAAAAGCAGAAGGGCGACTTCGGAGCTGTCTTTG ATAGAACTTGTGCAGAGAAATCAACGGAGGAAGTTGAGAGATGGAGAAAAGCTTTGCATATTGTGGCTCAAATCGCTGGT TACCATACAAGCAACTATGATGATGATGCAGTCATGATTGCAAAAATTGTTACCGATGTTTCGAACAAGTTCATTGATTC TACAACATCAAATGATTCCGACAGCTTAGTTGGGATTGAAACTCATATACGGGAGATACAGACATTGTTGTCCTTAGAAT CCGATGAAGTCCGGATGGTTGGTATCTGGGGTCCTGCTGGAATTGGTAAGACGACCATCGCCAGAGCTTTATACGGAGAG CTCTCTAGTAAGTTTACACATGCTGCTTTTATTGAGAGTATCCAAGGGAAGTTTGAGCAAAATTATCGTGACGAGCACGC CTTCATGTTGCATTTACAAGAAAAACTTTTGTCTGAGACCTTAAATCAGAAAGATTTTAAAATAGGTCATTTGGGTGTGG CAAAAGCAAGACTGAAGGACAAGAAAGTGCTTGTCGTTCTTGATGATGTGGATGACTTAAAGCAGCTAGAAGCCATGACT GACAAAACTTGCTGGTTTGGGCCTCAAAGTAGGATTATCATCACAACAAAGGATAAAAAGCTTTTTGTAGCACATGAGAT CAACCATATTTACCAAGTGGATTTTCCATCTACATCTGAAGCTCTTGAAATTCTCTGTCTGTCTGCTTTTCGTCAACATT CACCTTCATCAGGGTTTGAGGACATGGCCATAGAAGTTACACGGCTCGCCGGTCGTCTTCCTTTGGGTCTGTGTGTTTTT GGCGCTTATCTGCGAGGAATGTCCAGGGATCGGTGGATACATGCATTACCTAGACTTAGGACGAGTCTTGATGGGAAGAT TGAGAAAGTGTTAAGGTTCAGCTATGATGCTTTATGCAAGGAAGATCAAGAATTGTTTCTTCATATAGCATGTTTTCTCA AAGGTGAATGGATTACTGACGTGGTGGAGTGTCTTGCGGAGAGTCGTTTGAACGTCAACCACGGGCTCCAAGTGTTGTTG GATAAATGTTTCATATCTATACGCAAATGGGGACGGTTGGCGGTGCATAATTTGCTTGAGCAATTGGCTAAAGATATTGT CCGTAAACAGTCTGATAATCCTGGGAAACGTCAGTTCTTGGTGGATGCTCAGGACATTTGTGATGTGCTCGAGGAAAATG CTGGCACTGAAACCATTAGAGGAATAGATTTTGACTTATCGGAGGTCAGGGGAGACTTAGTTATTGACGAGCGAGCCTTT GAAGGGATGTCTAGGCTCCAGTTCTTAAGATTTCAGAAACGGGGTTTGTATAACAACACCAAACTTCTCCTACCCCAGGA TCTGAAGTTTAGAGCTAGTAAACTTAGATTTCTTGAATGGGATCAGTTTCCGCTGGCATGTTTTCCTCGTGAGTTTCAAC CGCGGCGTCTTGTCAAACTTATGATGGAGCACAGCAAGCTTGAAAAGCTGTGGGAAGGACCTATTCCTCTCCCTTGTCTG AAGTTGATAGAGCTGTCTAGTTCCGACTACCTCAAAGAACTTCCGGATCTGTCCAATGCCACTAGTCTCAAGGTACTGAG GGCTGGTTTTTGCTCAAGTCTGTCGGAGATCTCCTCTATTGGGAAGTCCACTAGTCTCGAGGAGTTACATCTCGCTGGTT GCTTTGAGTTGATTGTGATCCCCTCGTCCATTGGGAATGCTATTAATCTCAAGACGTTGAATGTCCAGGTGTGCCAGGGT CTGGTTGAACTCCCCTCCTCTATTTGGAGCCTTAAGAAGTTAAAGAAACTGTTAATTGCAGGATGCCCAAACCTTAACCA TTTGGGGTCACAGTTGAGAAGCTTTCCTGATATTTCCGGAAACATTACAGAATTAGATATGAGTAATACAGCGATAGAAG AGTTTCCTTCGTCAATCATGGCTTTTTCGTGTCTTCGTAAACTCACAACAATGACTGCTGAAAGTCTCAGGGTGTTTCCA GATGTTCCTGACACCATCGAAGTGTTAAAATTGCACAATGCGGGAATAGAAGAAATTCCTCCGTCGATTAAGAATCTCTC AGGTCTCACTACACTAAGCATGCCTCGCTGCAAGAAGCTAAAGGTCCTTCCAACCAACGTCAACCTGCAATCGCTCTCTT CACTTGATCTCAGTTCCTGCACACAATTGAGAACTTTTCCAGAGATATCTGTAGGCATTAGATCTCTTAATCTGAGCAAT ACTGGTATAGAAGAAGTCCATTCATCCATATGGTCTTGGTCCAGTCTTCTTAAATTGAACTTGGAAGATTGCCACAGCCT TCGGGTGTTCCATTGCGTTCCTGACAACATCGAAGAGTTGGACTTGAGAAATACGGGAACAGATTTCTCAGGTGGGGATT TACGTATAAACCTCAAAGGGTGCAAGAATCTTGTGTCACTGCCCCACATTCCGTATCGCGTCTCATACCTTGATGCATCT AACTGTGAGTCGCTGAAGAGAATAGATGGCTTAGTTAGCAATCCAGAGAGATGTCTCAGTTTTGCTAACTGTTTCAAGCT GAGTGAAGCAGCGAGAGAACTCATCGAGGAATCGGATTACAAGTTTGCGCTCTTACCTGGTGGAGAACTGCCTGCAGAAT TTGATCACCGAGCAAGAGAGGGTTTACTAACTGTCAATTTGGATCAGAGCCCTCTACCTTTATTCTTACGATTTAAAGCT TGCCTTTTGCTGCTTCATGGACACTATATAGAGGACGAGGATGCCAGTGAGGATGATAAGGACGATGAATGGATGGGTGC CAAGAGGCTTTTCTGTGACATCTGGTACGTTCAGAATGGCCTCTATGTTGGACATGGATCCTGCAAGTACCAGCTACCAG CAGTACTTGGATTTAAGGAGCATGTGTATTTCTTGGAATCTTCCATTTCACTAAACCTTCCTGAAACAGATGAGAATGTC AGCCAGCTTCATTTTGAGTTCAAGATCACTGGTAAATACTGGGATGTAAAAGACTTTGGTCTACAGCTCTTCGAAGACCC TGATGTTCGTGATGACCATGTATGCTGTGGTGATACTTACAAAGAAACTGCGGACATCAATATTAGAGAAAACTTACATG CAGGAACAATGTGA |
| AA seq | Len:1258 aa MPKIKSKFKISENTSFSRRHHLRRRSAAVMPSSISEFSKSWPRKGSLRTTLVTDSCFMDEKQSHHQYETPPGCCLQRVTR LVFLKYIFRSARLMTLSRNCKHHVFPSFHGPDVRRGFLSYLLKELREKAIDVFIDNDIERSKLIGPELTEAIRGSLIAVV LISRNYASSTWCLNELVQIMKCWEEDKQTVEVIFYEVDPSDVKKQKGDFGAVFDRTCAEKSTEEVERWRKALHIVAQIAG YHTSNYDDDAVMIAKIVTDVSNKFIDSTTSNDSDSLVGIETHIREIQTLLSLESDEVRMVGIWGPAGIGKTTIARALYGE LSSKFTHAAFIESIQGKFEQNYRDEHAFMLHLQEKLLSETLNQKDFKIGHLGVAKARLKDKKVLVVLDDVDDLKQLEAMT DKTCWFGPQSRIIITTKDKKLFVAHEINHIYQVDFPSTSEALEILCLSAFRQHSPSSGFEDMAIEVTRLAGRLPLGLCVF GAYLRGMSRDRWIHALPRLRTSLDGKIEKVLRFSYDALCKEDQELFLHIACFLKGEWITDVVECLAESRLNVNHGLQVLL DKCFISIRKWGRLAVHNLLEQLAKDIVRKQSDNPGKRQFLVDAQDICDVLEENAGTETIRGIDFDLSEVRGDLVIDERAF EGMSRLQFLRFQKRGLYNNTKLLLPQDLKFRASKLRFLEWDQFPLACFPREFQPRRLVKLMMEHSKLEKLWEGPIPLPCL KLIELSSSDYLKELPDLSNATSLKVLRAGFCSSLSEISSIGKSTSLEELHLAGCFELIVIPSSIGNAINLKTLNVQVCQG LVELPSSIWSLKKLKKLLIAGCPNLNHLGSQLRSFPDISGNITELDMSNTAIEEFPSSIMAFSCLRKLTTMTAESLRVFP DVPDTIEVLKLHNAGIEEIPPSIKNLSGLTTLSMPRCKKLKVLPTNVNLQSLSSLDLSSCTQLRTFPEISVGIRSLNLSN TGIEEVHSSIWSWSSLLKLNLEDCHSLRVFHCVPDNIEELDLRNTGTDFSGGDLRINLKGCKNLVSLPHIPYRVSYLDAS NCESLKRIDGLVSNPERCLSFANCFKLSEAARELIEESDYKFALLPGGELPAEFDHRAREGLLTVNLDQSPLPLFLRFKA CLLLLHGHYIEDEDASEDDKDDEWMGAKRLFCDIWYVQNGLYVGHGSCKYQLPAVLGFKEHVYFLESSISLNLPETDENV SQLHFEFKITGKYWDVKDFGLQLFEDPDVRDDHVCCGDTYKETADINIRENLHAGTM* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |