Names & Information
Knowledge of BnaA05G0483600ZS:
| Gene Name | BnaA05G0483600ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | hypothetical protein EUTSA_v10022404mg, partial [Eutrema salsugineum] |
| Best Hit (SwissProt) | Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1 |
| NT seq | Len:3240 nt ATGGCTCTTTCTGCTTTGTCTCGCCATTGTAAACACCATGTCTTTCCTAGCTTTCACGGGCCAGATGTCCGTAGAGGCTT TCTCAGCTACTTACTGAAGGAGTTAAGAAAGAAAGCAATCGACGTCTTCATAGACAATGACATAGAGAGGAGCAAGTTGA TTGGTCCCGAGCTCACTGAAGCTATAAGAGGATCTTTAACTGCAGTTGTCTTGATCTCGAGGAACTACGCTTCATCAACA TGGTGTCTGAACGAGTTGGTGGAGATCATGAAGTACAGGGATGAAGATAACCAGACGGTGATGGTGATTTTCTATGAAGT GGATCCTTCTGACGTGAAAAAGCAGAAGGGAGACTTCGGAGCTGTCTTTGATAAAACTCGTGCAAAGAAATCAACCGATG AAGTTGAGAGTTGGAGAAAAGCTTTGAAGCTTGTGGCTCAAATCGCTGGTTACCACACAAGCAACTATGATGATGACGCA GTCATGATTGAAACAATTGTAACCGATATTTCGAACAAGTTCAACGATTCTACAACATCAAATGATTCCAACAGCTTGGT TGGGATTGGAACTCATATCAAGGAGATAGAGTCATTGTTGTCCTTAGAATCCGATGAAGTCCGGATGGTTGGTATCTGGG GTCCTTCTGGAATTGGTAAGACGACCATCGCCAGAGCTTTATATGGAGAGCTCTCTAGTAAGTTTACACATGCTGCTTTT ATTGAGAGTACCCAAGGGAAGTTTGAGCAAAACTATCGAGACGAGCACGCGTTCAAGTTGCATTTACAAGAACAACTTTT GTCTAAGACCTTAAATCAGAAAGATGTAAAAATAGGTCATCTGGGTGTGGCAAAAGCAAGGCTGAAGGACAAGAAAGTGC TTGTCGTTCTTGATGATGTGGATGACTTAAAGCAGCTAGAAGCCATGACTGACCAAACTTGCTGGTTTGGGCCTCAAAGT AGGATTATCATCACGACAAAGGATAAAAAGCTGTTGGTAGCACATGCGATCAACCATATTTACCAAGTGGATTTTCCATC TACATCTGAAGCTCTTGAAATTCTCTGTCTGTCTGCTTTTCGTCAAAATTCGCCGTCATTTGGGTTTAAGGACATGGCCA TTGAAGTTACCCGGCTCGCCGGTAACCTTCCTTTGGGTCTACGTGTTTTTGGCGCATATCTGCGAGGAATGTCCAGAGAT CAGTGGATATATGCATTGCCTCGTCTTAGGACTAGTCTTGATGGGGAGATTGGGAAAGTATTAAGGTTCAGCTATGATGC TTTATCCGAGGAAGATCAAGAATTGTTTCTTCATATAGCATGTTTTTTCAATGGTTGGTGGATTGATGACGTTGTGGACT GTCTTTCGGAGAGTCGTTTGAACGTCAACCACGGGCTCCAAGTGTTGTTCGATAGATGTTTCATATCTATACTCGAACGG GGACGGTTGGTGGTTCATAATTTACTGGAGCAATTGGCTTTTGAGTTTGTTCGTAAACAGTCTGTTTCTGATCCTGGGAA ACGTCAGTTCTTGGTGGATGCTCAGGAAATTTGTGAAGTGCTCGAGGAAAATGGTCCGCTCCCATGTCTGAAGTTGATGG ATCTATCTAATTCCGACTACCTCAAAGAACTTCCAGATCTGTCTAATGCCCCTAATCTCAAGAAACTGACAGCTATTTTT TGCCCAATTCTGTCGGAGATCTCCTCTATTGGGAAGTCCACTAGTCTCCAGTATTTGAATCTAGCTGGTTGCTCCAACTT GATAGTGATTCCCTCTTCCATTGGGAATGCCATTAATCTCCAGATGTTGAATCTCCTGATATGCGACGGTCTGGTTGAAC TCCCATCTTCTATTTGGAGCCTCAAGAAGTTAAAGCATCTGTCAATTATAGGATGCCCAAAGATCCGTTTGGGGTCACAG TTGAGAAGCTTTCCTGATATTTCCAGTAACATCACATATCTCCATACGAGTGATGAAGAGATAGAGGAGTTTCCTTCATC AATCATGGCTTTTCCGTGTCTTCGTAAACTCACTGCAACAAATGCCAAAAGTCTCAAGGTGTTTCCAGACGTTCCTGCCA CCATCAAAGTGTTAGAATTTCAGAACGCGGTAATAGAAGAAATTCCTCCATCGATTCAGAGTCTCTCACGTCTCACTGAA CTAACCATGTTTGGCTGCCAGAAGCTAAAGGTCCTTCCAACTAACGTCAACCTGCAATCTCTCTATTCACTTAATTTCAG TTACTGCACACAATTGAGAACGTTTCCAGAGATATCTACAAGCATTGGATATCTTAATCTGAGCGATACTGCTATAGAAG AAGTCCCTTCATCCATATGGTCTTGGTCCCATCTTCTTGAATTGAACTTGGAAGATTGCCGCAGCCTTCGGGTGCTCCAT AGTTTTCCTGACAACATCGAAGAGTTGGACTCGGACTTGAGCGATACGGGAACAGATTTCTCAGGTGGTGATTCGGAGAC TGTTCTACCGTTACGTATAAACCTCAAAGGGTGTAAGAGTCTTGTGTCATTGCCCCACATTCCGTATTTCGTTTCACTCC TTGATGCATCTAACTGTGAGTCGCTGAAGATAATAGATGGCTTCTTTACCAATCCAGAGAGATGTCTCAGCTTTGCTAAT TGTTCCAAGCTAAGTGAAGCAGCGAGAGAACTCATCGAGGTATCGGATTGCAAGTTGGCGCTCTTACCTGGTGGAGAACT GCCTGCAGACTTTGATCACCGAGCAAGGGAGGGTGCACTAACTGTCAATTTGTGTCAGATCCCTCTTCCTTTATTCTTCA GATTTAAAGCTTGCCTTCTGCTGATTCATGGCGACTATATAGATAGGAAGGATTCCAGTAAGAATTATATGTTCGATGAA TGGATGGAAGGCAAGGGGCTTTCCTGTCACATCTCGTGCGTTCAGAATGGCGTCAAAGTTGGACATGGATCCTGCAAGTA CCAGCTACCAGCAGTACTTGGATTTATGGAGCATCTGTATTTCTTGGAATCTTCCATTTCACTAAACCTTCCTGAAACAG ATGAGAATGTCAGCCAGCTTCATTTTGAGTTCAAGATCACTGGTAAATACTGGGATGTAAAAGACTTTGGTCTACAGCTC TTCGTAGACCCTGATGTTCGTGATGACCATGTATGCTGTGGTGATACTTACAAAGAAACTGCGGACATCAATATTAGAGA AAACTTACATGCTGGAACAATGTCAAGAGAAACAATTTAA |
| AA seq | Len:1080 aa MALSALSRHCKHHVFPSFHGPDVRRGFLSYLLKELRKKAIDVFIDNDIERSKLIGPELTEAIRGSLTAVVLISRNYASST WCLNELVEIMKYRDEDNQTVMVIFYEVDPSDVKKQKGDFGAVFDKTRAKKSTDEVESWRKALKLVAQIAGYHTSNYDDDA VMIETIVTDISNKFNDSTTSNDSNSLVGIGTHIKEIESLLSLESDEVRMVGIWGPSGIGKTTIARALYGELSSKFTHAAF IESTQGKFEQNYRDEHAFKLHLQEQLLSKTLNQKDVKIGHLGVAKARLKDKKVLVVLDDVDDLKQLEAMTDQTCWFGPQS RIIITTKDKKLLVAHAINHIYQVDFPSTSEALEILCLSAFRQNSPSFGFKDMAIEVTRLAGNLPLGLRVFGAYLRGMSRD QWIYALPRLRTSLDGEIGKVLRFSYDALSEEDQELFLHIACFFNGWWIDDVVDCLSESRLNVNHGLQVLFDRCFISILER GRLVVHNLLEQLAFEFVRKQSVSDPGKRQFLVDAQEICEVLEENGPLPCLKLMDLSNSDYLKELPDLSNAPNLKKLTAIF CPILSEISSIGKSTSLQYLNLAGCSNLIVIPSSIGNAINLQMLNLLICDGLVELPSSIWSLKKLKHLSIIGCPKIRLGSQ LRSFPDISSNITYLHTSDEEIEEFPSSIMAFPCLRKLTATNAKSLKVFPDVPATIKVLEFQNAVIEEIPPSIQSLSRLTE LTMFGCQKLKVLPTNVNLQSLYSLNFSYCTQLRTFPEISTSIGYLNLSDTAIEEVPSSIWSWSHLLELNLEDCRSLRVLH SFPDNIEELDSDLSDTGTDFSGGDSETVLPLRINLKGCKSLVSLPHIPYFVSLLDASNCESLKIIDGFFTNPERCLSFAN CSKLSEAARELIEVSDCKLALLPGGELPADFDHRAREGALTVNLCQIPLPLFFRFKACLLLIHGDYIDRKDSSKNYMFDE WMEGKGLSCHISCVQNGVKVGHGSCKYQLPAVLGFMEHLYFLESSISLNLPETDENVSQLHFEFKITGKYWDVKDFGLQL FVDPDVRDDHVCCGDTYKETADINIRENLHAGTMSRETI* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | NB-ARC domain |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |