Names & Information
Knowledge of BnaA06G0028600ZS:
| Gene Name | BnaA06G0028600ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable disease resistance protein At1g15890 [Brassica rapa] |
| Best Hit (SwissProt) | Probable disease resistance protein At1g15890 OS=Arabidopsis thaliana GN=At1g15890 PE=3 SV=2 |
| NT seq | Len:2568 nt ATGGGGATCGGTGTATCACTAGACAGAACATGTGATCAAGCGCTGGATCAAACCGGTAGCTGCTTATTTGGTGATAGAAA CTACATTCACATGATGAAGGCTAATCTTGATGCTCTGGAGACAGCTATGCAAGAACTTAGAGAAAAGCGAGATGATATTG CAAGAAAAGTTTCCATAGAAGAAGACAAAGGTTTGGAGCAGCTTACTCAAGTAAAAGGATGGCGTTCAAGGGTGGACAGT GTTGACTCTCAGGTCAGTGATCTGCTTAAGAGTAGAGAAACTGAAACTAAAAGATTGTGTCTTTTTAGATATTTCTCCAA AAATTGCATATCAAGCTGTAAGTATGGTAAAGACGTATCGAAGAAGTTAATAGAAGTTAAAGAGCTTCTATCTAAAGGAG TTTTTGAAGAGTTGGCCGGAAAAAAGCTTGCAGCAAAGGTGGAGAAGAAACGTATCCAAACAACAGTAGGTTTGGATTCG ATGGTTGGAAAGGCATGGGACAGCATCATGAAACCTGAAGGAAGAACGTTAGGTATCTATGGCATGGGGGGAGTTGGAAA AACAACCCTCTTAACTCATATCAACAACAAATTGGACAAAGAGGTGAATGGATTTGATGTTGTGATATGGGTTGTGGTCT CTAAAGATTTGCAGTACAAGGGCATTCAGGATCAGATTCTACGAAGATTACGTGTTGACAAGGAATGGGAAAATCAAACA GAGGAGGAGAAAGCGTTTTCCATAGACGATATCCTAGGAAGAAAGAAATTTGTTCTGCTGTTAGATGATCTGTGGAGCGA GGTAGAGTTGAGCAAGATTGGAGTTCCACGTCCAACTCAAGAAAATGGATCGAAGATAGTTTTCACCACTCGTTCAAAGA AGGTTTGCAGTGACATGGAAGCTGATGATAAGTTGCAAATTGATTGTTTGTCAAGGAATGAAGCGTGGGAACTGTTTCAA AATGCAGTTGGAGAAGACCCATTAAAGCGGCATCAGGATATTCCCGCACTTGCAAAACAAATTTGTGAAAAATGTTATGG ATTGCCACTTGCACTCAATGTGATTGGCAAAGCCATGTCATGTAAAGAGGATGTACACGAATGGCGTGATGCAATTCATG TTCTCAGTACGTCGAGCCACGAGTTTCCAGGTATGGAAGAAAAGATTCTTTCAGTTTTGAAGTTCAGCTATGATGGTTTA GAGGATGAAAAGGTGAAATCATGCTTCCTGTACTGTTCTTTGTTCCCGGAAGATTTTGAAATTGAGGAGGAGGAGTTGAT AGAGTGTTGGATCAGCGAAGGATTTATAAAGGGAGAGAGAGATGAAGATGGAAGTAACAACAAAGGTCATGTTATAATTG GTTCGTTAGTTCGTGCACATCTACTGATGGAGTGCGAAAAAGAATACACTATTTACGAAACTGGATTCAAACCTGCGGTG AAAATGCATGATGTGTTACGTGAAATGGCTCTTTGGATAGGAAAAGAGGAAGCAAAACAGTGCGTCAAATCCGGGGGGAA GCTAAGCCGTATACCAGATGACATCAACTGGTCAGTTTGGAGAAGGATCTCGTTGATGAGTAATCAAATTAAAAAGATAT CTTGCTGTCCCAATTGCCCCAACCTTTCCACTCTGTTTCTCGGGTTTAACAGATTGAAGGTTATACGGGGTGAATTCTTT CAGTTTATGCCGTCCCTTGTCGTCTTGGATCTTTCGGATAACCGTGATCTTAGTGAATTGCCGGAAGAAATTTGCAGATT GACTTCCTTGCAGTACCTCAATTTATCACGCACAGAAATAAGTTGGTTATCAGTTGGTTTGAAGGGGTTGAGGAAACTAA TAAGCCTGGACCTGGAGTACTGTCTCAAGCTTAAAAGCATTGATGGGATAGGAACAAGCTTACCAAATCTTCAGGTGTTG AAACTATATTTTTCTAGTGTTTATATTGATGCAATATCAATTGAGGAGCTACAACTTTTAGAGCACTTGAAGATTTTCAC AGGAAACGTGAAAGATGCTTTAATTTTGGAAAGTATCCAAAGAGTTGAGCGATTGGCGAGTTGTGTTCAACGCCTTTTGA TTTCTGAAATGTCCGCAGAGGTATTAACATTAAACACGGCAGCTCTGGGTGGTCTTCAAAAACTTGTTATTGGGATGTCC AAAAACTCAGAGATAAAGATAGATTGGAAAAGCAAAGAGAAAGAAGATCTTCCTTCTCCATTCTTCAAGCACCTCTCCAG TATTGCTATATTAGATTTGGAAGGTCCAAAAAAATTGAGCTGGTTATTGTTTGCTCCATATCTCAAGCATCTGGAGGTGA GACGTTCAAAAACCCTAGAAGAAATAATAAATAAGGAGAAGGGAATGAGTATTAGCAATCTGCATCCTGATATGGCGGTT CCCTTTGAGAAGCTACAATCCCTCACTTTAGGGAGTTTGCCTAAATTAAAGAGAATATGCTCAAGTCCTCCTCCTGCTCT TCCATCCCTGAGAAAATTTGTTGTCGAAGACTGCCCAAAGCTACCCAAAGCTGCCATTAGAGAGTTTCAGAGACACGAAC AGGAGTAA |
| AA seq | Len:856 aa MGIGVSLDRTCDQALDQTGSCLFGDRNYIHMMKANLDALETAMQELREKRDDIARKVSIEEDKGLEQLTQVKGWRSRVDS VDSQVSDLLKSRETETKRLCLFRYFSKNCISSCKYGKDVSKKLIEVKELLSKGVFEELAGKKLAAKVEKKRIQTTVGLDS MVGKAWDSIMKPEGRTLGIYGMGGVGKTTLLTHINNKLDKEVNGFDVVIWVVVSKDLQYKGIQDQILRRLRVDKEWENQT EEEKAFSIDDILGRKKFVLLLDDLWSEVELSKIGVPRPTQENGSKIVFTTRSKKVCSDMEADDKLQIDCLSRNEAWELFQ NAVGEDPLKRHQDIPALAKQICEKCYGLPLALNVIGKAMSCKEDVHEWRDAIHVLSTSSHEFPGMEEKILSVLKFSYDGL EDEKVKSCFLYCSLFPEDFEIEEEELIECWISEGFIKGERDEDGSNNKGHVIIGSLVRAHLLMECEKEYTIYETGFKPAV KMHDVLREMALWIGKEEAKQCVKSGGKLSRIPDDINWSVWRRISLMSNQIKKISCCPNCPNLSTLFLGFNRLKVIRGEFF QFMPSLVVLDLSDNRDLSELPEEICRLTSLQYLNLSRTEISWLSVGLKGLRKLISLDLEYCLKLKSIDGIGTSLPNLQVL KLYFSSVYIDAISIEELQLLEHLKIFTGNVKDALILESIQRVERLASCVQRLLISEMSAEVLTLNTAALGGLQKLVIGMS KNSEIKIDWKSKEKEDLPSPFFKHLSSIAILDLEGPKKLSWLLFAPYLKHLEVRRSKTLEEIINKEKGMSISNLHPDMAV PFEKLQSLTLGSLPKLKRICSSPPPALPSLRKFVVEDCPKLPKAAIREFQRHEQE* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine rich repeat |
| KEGG | probable disease resistance protein At1g15890; K13459 disease resistance protein RPS2 (A) |