Names & Information
Knowledge of BnaA06G0080300GG:
| Gene Name | BnaA06G0080300GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable disease resistance protein At1g12280 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2 |
| NT seq | Len:2523 nt ATGAAGAAACTGGAGGCAAGGCGAGATGATGTGCTGAGATTCGTGAGGAGCGAGGAAGACGAAGGTCTAGAAAGGCTTAG TGGAGTTGATGTATGGCTTACGGCTGTCGGGAACATTGAAAAGGAGGCCCGTGAAACCCTTATGGCTTGTACAAGTGATG GCTGTTCAAGAAAACTAGTGGCAAGGTTTCGTTTAGGGAAAAAGGTTTTCTCGATGTTGAAAGATGTCAAGGAGCTCACG GATCGCAAATTAACGGAAGATGTTAATGCTCTGGCTGTGCCACCTGTGAGGAAAGTTGTGAGGAAAAGAGATCTAGAACA AAACATTGTTGGTCAGGAAACATTGCTCGAGAGTGCATGGAGCCGCCTCATGGATGAGGGAACCAAGGTTATGGGTCTCT ATGGCATGGGGGGAGTGGGAAAAACAACTCTTCTTGACCAACTCAGCAATAAGTTTTGTGGTGCAAATGATGGGGTTGAC ATAGTGATTTGGGTTGTAGTGTCTAAGGTTAAACGGAACGAGAAGATTCAAGACGAGATCGCTGAGAAACTAGGCATCTT TGAAGGGGAGTCATGGAAACACAAGACGGAGGACCAAAAAGCCTATAGTATACGCAATTCGCTGAAGACCAAACGATTTG TGTTGTTTTTGGATGACATTTGGAGCAAAGTGGAATTAAAAGGTATAGGTGTTCCATTTCCCACAAAGGAAAACAAATGC AAAATTGTATTCACCACTCGTTCAAGGGAAGTGTGTGCACTCATGGGGGATACTAACCCAGTCAAAGTCAGTTGTCTGGA CACCGACAAAGCCTGGGAGTTGTTCAAGGAGAAAGTCGGGGAAAGCATACTAGGAAGCCACATAGGCATTCCCGAACTCG CAAGAAAAGTGGCAGATAAATGCCATGGCCTACCATTGGCACTCAATGTTATTGGTGAGACCATGTCATCCAAGGACACA ATACAAGAATGGCGCCACGCAGTTAAGACTTTGACTTCAAATGCTGCAAAATTTTCTGGAATGGACGAGATTCTTCCAGT TTTGAAGTATAGCTATGACAGCCTCAAGGAGGAGCATGTGAAGCCATGTTTCCTCTATTGCTCTTTGTTTCCCGAAGATT TTGAAATCAGTAGAAATAGGCTAATTGAGTACTGGATCTGTGAGGGTTTCATACAAGAAAATCAGAGTAGAGAAAACGCA TTCGACGAAGGCTATAGTATCATCAGTTCTCTTCTCCGTGCATGTTTGTTGTTGGAAGAACCAGTCTATAAAGTAAAAGT GAAAATGCATGATGTGGTTCGGGAGATGGCTCTGTGGGTAGCATCTGATCTTGGGGAGCATGAAGGGAGATATACTGTGC AAGCCGGTGTTGGGTTACGTGATATACCGGAAGTCGAGAGTTGGGTGCCCGTGAGAAAGATGTCTTTGATGTACAATGAG ATCAAAGAGTTATCTGGCAGTCCGTGCTGCCCTGAACTTACAACTCTGCTTCTCCGGGAAAACAAGCTGATAACTATCTC AAGCAAATTCTTTCGACGTATGCCTAGGCTACTCGTCTTGGATCTCTCGAAAAATAACTTGTTCAATGGATTGCCAGACA AAATGTCATTGGTCGCCTTGAGATACCTTGACTTGTCAGGCACACGAATAAAGCGACTGCCTGTTGGTTTACAAGAGTCT AGAATGCTAATATATCTGGATTTGGAATTCACGAAGAGCCTTGATAATGTTTCGGGGATGATATCCAAATTTTCGAGGTT GAGGAGATTGGGACTATTGCGTTCCAAAATGAAGCTAGACATGAGCTTATTGGAAGAGTTGCAGCTCTTGAAATATCTAC AAGTTGTAACCATAGGTATAAACTCATGTTTGGTTGCGGAGAAATTGTCAAACTATGACAGGGTGGTGAAATGTATTAAG AAGTTAGATTATTCGGACCTTCTGGATGAATCATTCATAGTATTGACTTTACCGACTATGGTTGATCTTTGTAACCTCAT CATAGAAAGCTGTGGAATGATGGAGATAAAGACAGAGGGAGCAACTTCATTGTGGAACAGAAGTCCCATGAGTCCATCCT TCCTCAACCTTTCTACTGTCGGTATAAGTTATTGCAACGGCCTGAAGGATTTGACGTGGCTGTTGTTCGCTCCCAACCTT GCTATGCTTTACGTTGGTGATTTGACGGAAATAGAGTATATAATAAGCCAAGAGAAAGCTACAAATGGTGTGACAGAGAA GGAGGCAGGTAGCATCGTTCCTTTTGCAAGCTTAAAATACTTCACCTTCGATTATCTACCAATGTTGAAGAGCATCTACT GGAGTTCTCTCCCTTTTCAATGTTTGAAAGAAATCAAGGTACAAGAGTGTCCAAACCTGAGAAAGCTTCCATTGGATTCT AAAAGTGTTGCTACGGTTGAAGGATTTGTTATCAAGTCCACAGAGAGTTATTGGAAAGAGAATATTGAATGGGAGGACGA AGCCACTAAACTCCGTTTCCAAGCTTCCTGGAAATCCATTTAG |
| AA seq | Len:841 aa MKKLEARRDDVLRFVRSEEDEGLERLSGVDVWLTAVGNIEKEARETLMACTSDGCSRKLVARFRLGKKVFSMLKDVKELT DRKLTEDVNALAVPPVRKVVRKRDLEQNIVGQETLLESAWSRLMDEGTKVMGLYGMGGVGKTTLLDQLSNKFCGANDGVD IVIWVVVSKVKRNEKIQDEIAEKLGIFEGESWKHKTEDQKAYSIRNSLKTKRFVLFLDDIWSKVELKGIGVPFPTKENKC KIVFTTRSREVCALMGDTNPVKVSCLDTDKAWELFKEKVGESILGSHIGIPELARKVADKCHGLPLALNVIGETMSSKDT IQEWRHAVKTLTSNAAKFSGMDEILPVLKYSYDSLKEEHVKPCFLYCSLFPEDFEISRNRLIEYWICEGFIQENQSRENA FDEGYSIISSLLRACLLLEEPVYKVKVKMHDVVREMALWVASDLGEHEGRYTVQAGVGLRDIPEVESWVPVRKMSLMYNE IKELSGSPCCPELTTLLLRENKLITISSKFFRRMPRLLVLDLSKNNLFNGLPDKMSLVALRYLDLSGTRIKRLPVGLQES RMLIYLDLEFTKSLDNVSGMISKFSRLRRLGLLRSKMKLDMSLLEELQLLKYLQVVTIGINSCLVAEKLSNYDRVVKCIK KLDYSDLLDESFIVLTLPTMVDLCNLIIESCGMMEIKTEGATSLWNRSPMSPSFLNLSTVGISYCNGLKDLTWLLFAPNL AMLYVGDLTEIEYIISQEKATNGVTEKEAGSIVPFASLKYFTFDYLPMLKSIYWSSLPFQCLKEIKVQECPNLRKLPLDS KSVATVEGFVIKSTESYWKENIEWEDEATKLRFQASWKSI* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Leucine rich repeat |
| KEGG | probable disease resistance protein At1g12280; K13459 disease resistance protein RPS2 (A) |