Names & Information
Knowledge of BnaA06G0158300GG:
| Gene Name | BnaA06G0158300GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1 |
| NT seq | Len:2757 nt ATGGCAAATTCTTCATCGGAGGATTCGCAGTCTCGATCTGTGTGGGAGTACGATGCTTTCCTGAGTTTCAGAGGGACAGA TGTTCGCAAAAAATTCATCAGCCATCTCAACGATGCGCTCACTGAGGAAGGAATCATAACCTTCCACGACGACAGAGACC TTGAGAGAGGCAATCCAATCTTGAAAGGACTCGAGGAAGCGATGAATCAGTCAAGATTCGCTATCGTCGTTGTCTCCGAA GACTACGCTACATCTCAATGGTGCTTGAGAGAGCTTGCGTTTATGGTCGAGTTAGCTGAGAAGAAGAAACGCTTCGACTT GATCCCTATATTCTATGAAATCGATCCTTCAGCCTTGAAGAGCCGAACCGGTTGTTTTAACAAAGCTTTTGAGGATCATG AGAAGAGATTTGATGCTGAGACAGTGAGAAAGTGGAGAAGGGCTGTGGATATAGTTGCAAACATATCAGGCTGGGATTCC AAAACCAGGAGCGATGACTCAAAGCTTATACAAGAAGTTGTTGGAGATCTTTGTGAGAGGTTATACTCAGAGCCATCAGA CGAAACAAGTGAATTTGTAGGGATGAGTCTCCATAAGAAACGAATAGAATCTCTTTTATCAAAGGACGACTCTGATGATG ATGATGATGTCAAAATGGTAGGAGTCTGGGGTATGGGGGGAAGAGGGAAAACAACCATCGCTAAATGTGTCTACGAATCT CTCTCGACTCATTTTCCCAGTCGTTGCTTTCTCGGAAACGTGAAAGATGATTTCCATAAACATGGTGAATCATCATCATC CCATCTGCGGAAGCAAATCATGTCTGAAATTTTCCCCAAAAGCCCCCTGAATGCACGCTGCGTCAGCCCCGAGGCAATGA AGTGGAGGCTACGCGGCAAGAAGGTTCTTCTCATCCTCGATGATGTTGACGACATTCAGCAACTCCAAGAATTGGCTGGA GACTGCAAGTGGTTCGGACCAGGAAGCAGGATCATTATAACGACGCGTGACAAGCGCGTGTTAGATGAGCACTCTGTCAA ACACATTTATGAAGTGAAGCCTCTTAGGACCACACAAGCGCTTCAGCTTCTCAGCAAGCATGCCTTCAAAACGAATCGTC CACAAGCAGAGTTCAGACAACTCTGTTTAGATATTGTGGAGCAGCTTTGTGGTCTTCCTTTAGCGCTTCGGGTCATTGGT GCGTCTCTGTATGGTCGGAATATAGCATTTTGGGAAGATAAGCTGTGTATACTGAGAAACAGTCTTGATAAATCTATATC AACGCCGTTAAAAGTAAGTTATGATGCATTGGACGAGCATGAAAAGACTGTGTTTCTTTATGTCGCTGGTTGCTTCAACG GGGAATATATGGATCGAGCGATTATGGTACTAGATCCCTTTGTGATCAGATCCAAACCGAGGTTGGTAACTCTGATGGAG AAGTCTCTGATTAGTATGTCAAACAATACGAGGCTATGGGTTCATGATTTACTTCAAGACATGGCTAAGGATATCACTTG CGAAGGAAAAATGAAGAAGCGTAAGATGATGTGGAACTTTTTGGATATCAAAGGCTTGTTCACTGAAACTATGGCAGGGG GGAGTAAAGACATTGAGGTTGAAAGTATAATCCTCAACATGGCTGAAGAAACAGGGCTTTGCGTTAACCCCGAAACGTTT AAGAGGATGCGCGAACTCAAATTTCTTAAAATTCATAATAATTCAACTGCTGCGGGGAGCAAAGTGTGTATCGTCAACGT CGAAGATTTTGACTACCTCCCTCCACTAAGATATCTTCACTGGGAGGCTTACAATTTAAAGTCACTGCCTGCAAAGTTTG AGACTAACGTTCTAGTTGAGCTCAACCTCCCTGATAGCTCAGTTGAAACACTATGGAGCGGAAGTCAGGACCTTGGAAGT CTAAGACACATGAACCTTAACAGATGCAGGAATCTGATTGAAATTCCAGACCTTTCAAAGGCAAGGAATCTCGAGTGTTT ATGCCTTTGTGATTGCGAAAGCTTGGTTGAGCTCCCTTCTTCTCTTGGTCATCTTGATAAGTTAGTTAAGCTGTCCATGC TAAACTGCAAGAAACTCAAGAGTCTCCCGTGTAACATCAAATTGAAGTCTCTCAAAACTCTTTCTCTAGACGGATGCATC AACATAGAAGAATTTCCATTTGTTTCCGACGTTATTGAAGAGTTGGGACTGCGCTGCACATCAATTGAACTAGTGCCAGA TTCGATCAGCCGTCTCTCGAAGCTCACAGAGCTTCGGCTATCACATTGCAAGAGACTGAAGAATCTCCCTGACACCTTTG GGAATTTGACTTCACTCAAGCATCTCACGCTGACTTGCTGCCCCAACATCACAGTGTTTCCAATGCTTGGCAATGGAATA GAAACTTTGTCCTTGAACGGAACACCGATCGAGGAAGTTCCCTCATGGATAGGGGATAAGGTGAATCTGACGTGTCTTGA CATGTCAGAGTGCAAGAAGCTCCATAATCTGCCTCACTCGCTGAGAAACCTGAAAAACCTGAAGCTGCTCTATCTCCGAG GATGCATTAATATCACTGAGATCCCACAGGTTGCAGGGGAAATGAGAAGATTGGATTTATATGGGACGTCAATAGAGAAA TATGGAATTCTCTCTGAAGAGGAAGCACTTGTGTTGCACAATCGTGATATGGACTTCTTGAAAGGGTTTCTCACTCGCTA TGTCCGCATGTACAAGAGAAAACGCAACTCTAGATAG |
| AA seq | Len:919 aa MANSSSEDSQSRSVWEYDAFLSFRGTDVRKKFISHLNDALTEEGIITFHDDRDLERGNPILKGLEEAMNQSRFAIVVVSE DYATSQWCLRELAFMVELAEKKKRFDLIPIFYEIDPSALKSRTGCFNKAFEDHEKRFDAETVRKWRRAVDIVANISGWDS KTRSDDSKLIQEVVGDLCERLYSEPSDETSEFVGMSLHKKRIESLLSKDDSDDDDDVKMVGVWGMGGRGKTTIAKCVYES LSTHFPSRCFLGNVKDDFHKHGESSSSHLRKQIMSEIFPKSPLNARCVSPEAMKWRLRGKKVLLILDDVDDIQQLQELAG DCKWFGPGSRIIITTRDKRVLDEHSVKHIYEVKPLRTTQALQLLSKHAFKTNRPQAEFRQLCLDIVEQLCGLPLALRVIG ASLYGRNIAFWEDKLCILRNSLDKSISTPLKVSYDALDEHEKTVFLYVAGCFNGEYMDRAIMVLDPFVIRSKPRLVTLME KSLISMSNNTRLWVHDLLQDMAKDITCEGKMKKRKMMWNFLDIKGLFTETMAGGSKDIEVESIILNMAEETGLCVNPETF KRMRELKFLKIHNNSTAAGSKVCIVNVEDFDYLPPLRYLHWEAYNLKSLPAKFETNVLVELNLPDSSVETLWSGSQDLGS LRHMNLNRCRNLIEIPDLSKARNLECLCLCDCESLVELPSSLGHLDKLVKLSMLNCKKLKSLPCNIKLKSLKTLSLDGCI NIEEFPFVSDVIEELGLRCTSIELVPDSISRLSKLTELRLSHCKRLKNLPDTFGNLTSLKHLTLTCCPNITVFPMLGNGI ETLSLNGTPIEEVPSWIGDKVNLTCLDMSECKKLHNLPHSLRNLKNLKLLYLRGCINITEIPQVAGEMRRLDLYGTSIEK YGILSEEEALVLHNRDMDFLKGFLTRYVRMYKRKRNSR* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | TMV resistance protein N-like; K19613 leucine-rich repeat protein SHOC2 (A) |